| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787415
Identifier: 91787415
GI number: 91787415
Start: 1579197
End: 1579892
Strand: Direct
Name: 91787415
Synonym: Bpro_1523
Alternate gene names: NA
Gene position: 1579197-1579892 (Clockwise)
Preceding gene: 91787414
Following gene: 91787416
Centisome position: 30.37
GC content: 50.14
Gene sequence:
>696_bases ATGGCTACGGACAAGGCAAACAGTTATCCAAAGATCGGAAGGAAAATCTGGTTCCTTTTGCGAGCACGTTTTGCAAAAAC ACTACCATCATCAGTCGGACCCGAGTACATCATTTCGACTTCGGATATGACCGAAGCCTCTGCGCGATCAAATGTTCTTA ACCCGTTTCGCGACTTGAAACTTATTGACGAGAACGGGAAGCCAACTGAACTGGCTGAGCGCTGGAGGCATGATGATGAG TATGCCGATGTGTGCAAGGAAATTCGAGGCCTAATTTACCCGGCACCCCTGATTGAGGCCTATCCGGACGGAAGCACCGC ACAAAAGGAAAGCATCAAGAAATGGTTCATGAAGAACAGCAAAGTAGGGGATGTGGCTGGCAAGATGTTTGCCGACACTT ACATGCTGTTGAGCCAAGGTGATCTGAACGCCTCGGATAGCGATACCAAGGTTACTTCGTCGTCACGATCTGCAAGCACG TCTGCAACGGCAAAGAAAAGCGTAGTGAAAAAATCTGCGTCGGCTGCACAGCCGACCGACCGTGCACCTGCGCCCGCTGT CGATCCTCATGTGATCCGGAAGCTGCCAAGTGTTCACATCGATGTACAGGTGCACATCAGCCCGGATACAACACCGGAGC AAATTGATCGAATTTTTGAAAGTATGTCCAAGCATCTCGGCTCGTACATTGCTTGA
Upstream 100 bases:
>100_bases ATCTGATTAGAGGATCACCCAGAACGTTCGCGAAAAAATCTAACATAAATCGTTGCAGCTTGTTACGATGAATGGATTAT TTCTACAAGGGGGATGGAAG
Downstream 100 bases:
>100_bases GGCGTGGAAATGCACACAGCAGTAGAGACGCTTAGCTTAGCAAGTGAGCTCCAGCGGCTAATACACAAGGAAATTAAGCC GCCGTCCGCTACTGCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MATDKANSYPKIGRKIWFLLRARFAKTLPSSVGPEYIISTSDMTEASARSNVLNPFRDLKLIDENGKPTELAERWRHDDE YADVCKEIRGLIYPAPLIEAYPDGSTAQKESIKKWFMKNSKVGDVAGKMFADTYMLLSQGDLNASDSDTKVTSSSRSAST SATAKKSVVKKSASAAQPTDRAPAPAVDPHVIRKLPSVHIDVQVHISPDTTPEQIDRIFESMSKHLGSYIA
Sequences:
>Translated_231_residues MATDKANSYPKIGRKIWFLLRARFAKTLPSSVGPEYIISTSDMTEASARSNVLNPFRDLKLIDENGKPTELAERWRHDDE YADVCKEIRGLIYPAPLIEAYPDGSTAQKESIKKWFMKNSKVGDVAGKMFADTYMLLSQGDLNASDSDTKVTSSSRSAST SATAKKSVVKKSASAAQPTDRAPAPAVDPHVIRKLPSVHIDVQVHISPDTTPEQIDRIFESMSKHLGSYIA >Mature_230_residues ATDKANSYPKIGRKIWFLLRARFAKTLPSSVGPEYIISTSDMTEASARSNVLNPFRDLKLIDENGKPTELAERWRHDDEY ADVCKEIRGLIYPAPLIEAYPDGSTAQKESIKKWFMKNSKVGDVAGKMFADTYMLLSQGDLNASDSDTKVTSSSRSASTS ATAKKSVVKKSASAAQPTDRAPAPAVDPHVIRKLPSVHIDVQVHISPDTTPEQIDRIFESMSKHLGSYIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25446; Mature: 25315
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDKANSYPKIGRKIWFLLRARFAKTLPSSVGPEYIISTSDMTEASARSNVLNPFRDLK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHCE LIDENGKPTELAERWRHDDEYADVCKEIRGLIYPAPLIEAYPDGSTAQKESIKKWFMKNS EECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCC KVGDVAGKMFADTYMLLSQGDLNASDSDTKVTSSSRSASTSATAKKSVVKKSASAAQPTD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC RAPAPAVDPHVIRKLPSVHIDVQVHISPDTTPEQIDRIFESMSKHLGSYIA CCCCCCCCHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATDKANSYPKIGRKIWFLLRARFAKTLPSSVGPEYIISTSDMTEASARSNVLNPFRDLK CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHCE LIDENGKPTELAERWRHDDEYADVCKEIRGLIYPAPLIEAYPDGSTAQKESIKKWFMKNS EECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCC KVGDVAGKMFADTYMLLSQGDLNASDSDTKVTSSSRSASTSATAKKSVVKKSASAAQPTD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC RAPAPAVDPHVIRKLPSVHIDVQVHISPDTTPEQIDRIFESMSKHLGSYIA CCCCCCCCHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA