| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787417
Identifier: 91787417
GI number: 91787417
Start: 1580494
End: 1581135
Strand: Direct
Name: 91787417
Synonym: Bpro_1525
Alternate gene names: NA
Gene position: 1580494-1581135 (Clockwise)
Preceding gene: 91787416
Following gene: 91787418
Centisome position: 30.39
GC content: 50.47
Gene sequence:
>642_bases TTGTACTTGGACTGTCAAAGCCGCCCCCTGTTATTCGGAGGTATTTACGCGAAAAATGTATGGATCAAATCAATGACGCT CTTACATGAACAACGGGTACGTCGAGTGGCAATCCTTTGCTGCACGTGCATGCGCAACATTGCGTTCTACCGGGCATGTT GGGACGGACATGACCTTCGCGTGAACAATGAGTTCTGGAAGACGGTGAGCGGCAATTTTCTCGACACTGCTGTGCATGAG TGGTTCAAGGCTTTTGCACATAAGCGAAGCAAACATCACTGGAGCAAAGTCATTCCCGAATCATCACACGCAGCGTTTGA ACATGATCTGCTTGCACATCTTGACCTTGCGCCGATGCCTACATACAACGGAGACGAGCTGGAAGGGGCACACCCGTACG AGCAGTTCAATGATCTGTTGCGGAAGTACCGTGACAAGTTTCTTGCACATCTGGACGATGAACTGGTTGCCAACCTGCCC GTCACCGAACCGATGCGTAAGGGGGCTGAGTTCTTGTTCGACTATCTGACTACGACTCAACCAGATGCATTTAGTGGGTA TTTGATGCAAACTTCCGCCGACTTCTTCGATGGGTTGAGCGAACTTGGACGTGCTGAAGTGAACAGACGGGAGGCGACTT AA
Upstream 100 bases:
>100_bases TCATTGGCGCAACTCAAGTAAACCTTCAGGTCTGAACTATCTGTGACGAGAAAGGTGTAGGTGAACGCGGTGACTGATCC GTTCCCTGAGTATTTGGTTC
Downstream 100 bases:
>100_bases ATGGTGAAAGCCTGACTAGCAAAAGAAAAAGCCTCCACAAGGGAGGCTTTTTAATGCGGAAAATCGACTGTCACCAGAAA TGACATCAGCAATCACGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MYLDCQSRPLLFGGIYAKNVWIKSMTLLHEQRVRRVAILCCTCMRNIAFYRACWDGHDLRVNNEFWKTVSGNFLDTAVHE WFKAFAHKRSKHHWSKVIPESSHAAFEHDLLAHLDLAPMPTYNGDELEGAHPYEQFNDLLRKYRDKFLAHLDDELVANLP VTEPMRKGAEFLFDYLTTTQPDAFSGYLMQTSADFFDGLSELGRAEVNRREAT
Sequences:
>Translated_213_residues MYLDCQSRPLLFGGIYAKNVWIKSMTLLHEQRVRRVAILCCTCMRNIAFYRACWDGHDLRVNNEFWKTVSGNFLDTAVHE WFKAFAHKRSKHHWSKVIPESSHAAFEHDLLAHLDLAPMPTYNGDELEGAHPYEQFNDLLRKYRDKFLAHLDDELVANLP VTEPMRKGAEFLFDYLTTTQPDAFSGYLMQTSADFFDGLSELGRAEVNRREAT >Mature_213_residues MYLDCQSRPLLFGGIYAKNVWIKSMTLLHEQRVRRVAILCCTCMRNIAFYRACWDGHDLRVNNEFWKTVSGNFLDTAVHE WFKAFAHKRSKHHWSKVIPESSHAAFEHDLLAHLDLAPMPTYNGDELEGAHPYEQFNDLLRKYRDKFLAHLDDELVANLP VTEPMRKGAEFLFDYLTTTQPDAFSGYLMQTSADFFDGLSELGRAEVNRREAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24750; Mature: 24750
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLDCQSRPLLFGGIYAKNVWIKSMTLLHEQRVRRVAILCCTCMRNIAFYRACWDGHDLR CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VNNEFWKTVSGNFLDTAVHEWFKAFAHKRSKHHWSKVIPESSHAAFEHDLLAHLDLAPMP ECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC TYNGDELEGAHPYEQFNDLLRKYRDKFLAHLDDELVANLPVTEPMRKGAEFLFDYLTTTQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PDAFSGYLMQTSADFFDGLSELGRAEVNRREAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYLDCQSRPLLFGGIYAKNVWIKSMTLLHEQRVRRVAILCCTCMRNIAFYRACWDGHDLR CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VNNEFWKTVSGNFLDTAVHEWFKAFAHKRSKHHWSKVIPESSHAAFEHDLLAHLDLAPMP ECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC TYNGDELEGAHPYEQFNDLLRKYRDKFLAHLDDELVANLPVTEPMRKGAEFLFDYLTTTQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PDAFSGYLMQTSADFFDGLSELGRAEVNRREAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA