| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is add [H]
Identifier: 91787381
GI number: 91787381
Start: 1542202
End: 1543284
Strand: Direct
Name: add [H]
Synonym: Bpro_1487
Alternate gene names: 91787381
Gene position: 1542202-1543284 (Clockwise)
Preceding gene: 91787380
Following gene: 91787382
Centisome position: 29.66
GC content: 62.51
Gene sequence:
>1083_bases ATGCCTCGGCTGCCTAGTGCAGCTTTTTCTTTTGGAGCTGACATGAATCCTGCAAAACCTGTATCCGCCGACCGCCTGCC CGAGCTGCTCCGGAAAATGCCCAAGGCCGAGCTGCACATCCACATCGAGGGCTCGCTGGAGCCCGAGCTGATTTTTGCGC TGGCGCAGCGCAACGGCGTGGCGATTCCGTATCGCAGCGTGGACGAGTTGCGCAGCGCCTATGCCTTCACCAACCTGCAG AGCTTTCTCGACATTTATTACGCCGGCGCCAGCGTGCTGCTGAAAGAGCAGGACTTCTACGACATGGCGCGCGCCTACCT GCTGCGGGCGGCGCAGGACAACGTGGTTCATGCCGAGCTTTTTTTCGACCCGCAGACGCACACCGCGCGCGGTGTCGGCA TGGACACCGTCATCAACGGCCTGCACCGCGCCTGTGTCGATGCCGGGGCCGAACTCGGCCTCAGCGCCACGCTGATCCTG TGTTTCCTGCGCCACCTCAGCGAAGAGGAGGCGTTTGAAACGCTGGAGCAGGCACTGCCTTACCGTGACAAATTCATCGG TGTCGGGTTGGACTCCGGCGAGGTGGGCAACCCGCCCGAAAAGTTTGCCCGCGTGTTTGCCCGCTGCCGCGAGCTGGGCT TTCACCTGGTTGCGCACGCCGGCGAAGAAGGGCCGCCCGCCTATGTCTGGACGGCCCTGGACCTGCTCAAGGTGGAGCGG GTCGACCACGGCGTGCAGTCCAGCAAGGACGCGGCCCTGATGCGGCGCCTGGCCCAGGACCGTATTCCGCTCACGGTGTG CCCCCTGTCCAATCTCAAGCTGTGCGTGTTTCCCGACCTGGCCAGCCACAACCTGCGCACGTTGCTGGATGCGGGGCTGG TGGCCACCGTCAACTCGGATGACCCGGCTTATTTTGGCGGCTACATGAATGACAACTTCACGCAAACCTTTGCCGCGGTG GACTTGAATGCAGGGCACGCCTACACACTGGCGCGCAACAGCTTCGAGGCCAGTTTCATCGGTGCACCTGCCCGACAGGC CCTGATCCAACGTCTGGACGAAACCTTTGAAACCTTTCAATGA
Upstream 100 bases:
>100_bases AGGGTTGGGGTGAGGGCCGCAGCGCAACTATTGCTACTGCTGTGTGCACCGCGAGCGCTCCCGTCCCGACCGTCCCCCGA AGGAGAAGGAGCAAAACATC
Downstream 100 bases:
>100_bases GCGGGTCGCTGCGCCGGCCCAGCGAGAGGTGTCGTTGATGCTGTCGATGATGAATTTCCAGGCATGGCACTGATCCCGCA GCCGCAGCCGCAGCGGACGC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MPRLPSAAFSFGADMNPAKPVSADRLPELLRKMPKAELHIHIEGSLEPELIFALAQRNGVAIPYRSVDELRSAYAFTNLQ SFLDIYYAGASVLLKEQDFYDMARAYLLRAAQDNVVHAELFFDPQTHTARGVGMDTVINGLHRACVDAGAELGLSATLIL CFLRHLSEEEAFETLEQALPYRDKFIGVGLDSGEVGNPPEKFARVFARCRELGFHLVAHAGEEGPPAYVWTALDLLKVER VDHGVQSSKDAALMRRLAQDRIPLTVCPLSNLKLCVFPDLASHNLRTLLDAGLVATVNSDDPAYFGGYMNDNFTQTFAAV DLNAGHAYTLARNSFEASFIGAPARQALIQRLDETFETFQ
Sequences:
>Translated_360_residues MPRLPSAAFSFGADMNPAKPVSADRLPELLRKMPKAELHIHIEGSLEPELIFALAQRNGVAIPYRSVDELRSAYAFTNLQ SFLDIYYAGASVLLKEQDFYDMARAYLLRAAQDNVVHAELFFDPQTHTARGVGMDTVINGLHRACVDAGAELGLSATLIL CFLRHLSEEEAFETLEQALPYRDKFIGVGLDSGEVGNPPEKFARVFARCRELGFHLVAHAGEEGPPAYVWTALDLLKVER VDHGVQSSKDAALMRRLAQDRIPLTVCPLSNLKLCVFPDLASHNLRTLLDAGLVATVNSDDPAYFGGYMNDNFTQTFAAV DLNAGHAYTLARNSFEASFIGAPARQALIQRLDETFETFQ >Mature_359_residues PRLPSAAFSFGADMNPAKPVSADRLPELLRKMPKAELHIHIEGSLEPELIFALAQRNGVAIPYRSVDELRSAYAFTNLQS FLDIYYAGASVLLKEQDFYDMARAYLLRAAQDNVVHAELFFDPQTHTARGVGMDTVINGLHRACVDAGAELGLSATLILC FLRHLSEEEAFETLEQALPYRDKFIGVGLDSGEVGNPPEKFARVFARCRELGFHLVAHAGEEGPPAYVWTALDLLKVERV DHGVQSSKDAALMRRLAQDRIPLTVCPLSNLKLCVFPDLASHNLRTLLDAGLVATVNSDDPAYFGGYMNDNFTQTFAAVD LNAGHAYTLARNSFEASFIGAPARQALIQRLDETFETFQ
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=345, Percent_Identity=24.0579710144928, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1787910, Length=329, Percent_Identity=29.1793313069909, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17538512, Length=359, Percent_Identity=23.6768802228412, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI32565969, Length=339, Percent_Identity=23.8938053097345, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324188, Length=341, Percent_Identity=43.108504398827, Blast_Score=292, Evalue=5e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 39720; Mature: 39588
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLPSAAFSFGADMNPAKPVSADRLPELLRKMPKAELHIHIEGSLEPELIFALAQRNGV CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCC AIPYRSVDELRSAYAFTNLQSFLDIYYAGASVLLKEQDFYDMARAYLLRAAQDNVVHAEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHHCCCEEEEEE FFDPQTHTARGVGMDTVINGLHRACVDAGAELGLSATLILCFLRHLSEEEAFETLEQALP EECCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCC YRDKFIGVGLDSGEVGNPPEKFARVFARCRELGFHLVAHAGEEGPPAYVWTALDLLKVER CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VDHGVQSSKDAALMRRLAQDRIPLTVCPLSNLKLCVFPDLASHNLRTLLDAGLVATVNSD HHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEECCHHHCHHHHHHHCCEEEEECCC DPAYFGGYMNDNFTQTFAAVDLNAGHAYTLARNSFEASFIGAPARQALIQRLDETFETFQ CCCEECCCCCCCHHHEEEEEECCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRLPSAAFSFGADMNPAKPVSADRLPELLRKMPKAELHIHIEGSLEPELIFALAQRNGV CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCC AIPYRSVDELRSAYAFTNLQSFLDIYYAGASVLLKEQDFYDMARAYLLRAAQDNVVHAEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHHCCCEEEEEE FFDPQTHTARGVGMDTVINGLHRACVDAGAELGLSATLILCFLRHLSEEEAFETLEQALP EECCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCC YRDKFIGVGLDSGEVGNPPEKFARVFARCRELGFHLVAHAGEEGPPAYVWTALDLLKVER CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VDHGVQSSKDAALMRRLAQDRIPLTVCPLSNLKLCVFPDLASHNLRTLLDAGLVATVNSD HHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEECCHHHCHHHHHHHCCEEEEECCC DPAYFGGYMNDNFTQTFAAVDLNAGHAYTLARNSFEASFIGAPARQALIQRLDETFETFQ CCCEECCCCCCCHHHEEEEEECCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA