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The map label for this gene is ocd2 [H]

Identifier: 91787281

GI number: 91787281

Start: 1422559

End: 1423521

Strand: Reverse

Name: ocd2 [H]

Synonym: Bpro_1386

Alternate gene names: 91787281

Gene position: 1423521-1422559 (Counterclockwise)

Preceding gene: 91787282

Following gene: 91787280

Centisome position: 27.37

GC content: 60.02

Gene sequence:

>963_bases
ATGAAACTTACTTATCTCAACGACAAAACAGTCTCCAGCCTGCTTGACTACAAAAGCGTGGCCGACATCCTGGGCGAATC
TTTCGCCGATCTCGCGGCCGGCAACGCGGCGATCCATGCCCGGCAGCGAACCGACAGCTGCGGTATCCGGCTGAGCACCA
TGGGCGCCGTCTGGAACGCACGCCAAGTGGGCGGCGTCAAGGTCTATCCCACTGTCAAAGAGAAGTTTTCTTTCCTGATC
ACTTTGTTCGACCTGGAAAGCAACCTGCCGATCGCCGTCCTCGACGGCGGCAAGATCACCAAATTCCGCACGGCCGGATT
GACGGCGCTGATCGCATCCAAAGCTGCCGCAAAACAGGTTCGAAAGCTGGCTCTGTTCGGGGCGGGATTCCAGGGGCGCG
CCCAGGCACATGCGCTCTGCGAGATCTTCAAGTTCGAACAGATATCGGTCGTTGACCCACTGGGGGACGATAGCTGGTGC
AGCCGCCTGGCGCTCCAGACAGGCTGCCGCGTTAACCTGTGCGGCGCGGAAGCCGCTGTTCACGACGCTGACATCGTGGT
CACGGCAACGCGTTCGCTGGAACCCGTTTTCGACGGAAGCTGGCTCAAGCCCGGCGCGTTGGTATCCGCCATCGGAATCA
GTGCGCCTAAAGGGCGTGAACTTGACGATGCAACCCTGTCGCGGGCAAGCCGGATCATTGTGGAATGGATGCCGCAGAGC
GAACGCGAAGCAGGTGAGCTCGTCTTGTGGCGCCCTAAAAACGCCCGGGAGCGTGGAAAGATCGTGGATCTGCCGGAGTT
GTACCGCCAATCCATACCATGGCGTGGAAGTGACGAGGACATCATTGTCGCGAAGTCGGTGGGTGTTGGCCTTGCAGATG
TGGCCTGCGCCTATCTGGCCTATGCCCGTTATACCCTATCCCCAAAAGCCCGTGAGGCTTCAGCGCAGGAGCTCGCCGCA
TGA

Upstream 100 bases:

>100_bases
AATGCTTACATGAAGGAAAACATTCGTTTCCCGAACAAATACGGCATTCCCTGAGCACACAGACCGACGGTGAATCACGG
GAATCGCACCAGAAAAAAAT

Downstream 100 bases:

>100_bases
AAGTCTGCGTTATCGGCGCCGGCATCGTGGGCTGCTCGACGGCCTATCAATTGGCCCGCATGGGGCATGAGGTGCACCTC
GTGGATGAGGCCGCCGGTCC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKLTYLNDKTVSSLLDYKSVADILGESFADLAAGNAAIHARQRTDSCGIRLSTMGAVWNARQVGGVKVYPTVKEKFSFLI
TLFDLESNLPIAVLDGGKITKFRTAGLTALIASKAAAKQVRKLALFGAGFQGRAQAHALCEIFKFEQISVVDPLGDDSWC
SRLALQTGCRVNLCGAEAAVHDADIVVTATRSLEPVFDGSWLKPGALVSAIGISAPKGRELDDATLSRASRIIVEWMPQS
EREAGELVLWRPKNARERGKIVDLPELYRQSIPWRGSDEDIIVAKSVGVGLADVACAYLAYARYTLSPKAREASAQELAA

Sequences:

>Translated_320_residues
MKLTYLNDKTVSSLLDYKSVADILGESFADLAAGNAAIHARQRTDSCGIRLSTMGAVWNARQVGGVKVYPTVKEKFSFLI
TLFDLESNLPIAVLDGGKITKFRTAGLTALIASKAAAKQVRKLALFGAGFQGRAQAHALCEIFKFEQISVVDPLGDDSWC
SRLALQTGCRVNLCGAEAAVHDADIVVTATRSLEPVFDGSWLKPGALVSAIGISAPKGRELDDATLSRASRIIVEWMPQS
EREAGELVLWRPKNARERGKIVDLPELYRQSIPWRGSDEDIIVAKSVGVGLADVACAYLAYARYTLSPKAREASAQELAA
>Mature_320_residues
MKLTYLNDKTVSSLLDYKSVADILGESFADLAAGNAAIHARQRTDSCGIRLSTMGAVWNARQVGGVKVYPTVKEKFSFLI
TLFDLESNLPIAVLDGGKITKFRTAGLTALIASKAAAKQVRKLALFGAGFQGRAQAHALCEIFKFEQISVVDPLGDDSWC
SRLALQTGCRVNLCGAEAAVHDADIVVTATRSLEPVFDGSWLKPGALVSAIGISAPKGRELDDATLSRASRIIVEWMPQS
EREAGELVLWRPKNARERGKIVDLPELYRQSIPWRGSDEDIIVAKSVGVGLADVACAYLAYARYTLSPKAREASAQELAA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=223, Percent_Identity=28.2511210762332, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI4503065, Length=223, Percent_Identity=28.2511210762332, Blast_Score=89, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34513; Mature: 34513

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTYLNDKTVSSLLDYKSVADILGESFADLAAGNAAIHARQRTDSCGIRLSTMGAVWNA
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEHHHHHCC
RQVGGVKVYPTVKEKFSFLITLFDLESNLPIAVLDGGKITKFRTAGLTALIASKAAAKQV
HHCCCEEEEECHHHHHEEEEEEEECCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHH
RKLALFGAGFQGRAQAHALCEIFKFEQISVVDPLGDDSWCSRLALQTGCRVNLCGAEAAV
HHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHC
HDADIVVTATRSLEPVFDGSWLKPGALVSAIGISAPKGRELDDATLSRASRIIVEWMPQS
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEECCCC
EREAGELVLWRPKNARERGKIVDLPELYRQSIPWRGSDEDIIVAKSVGVGLADVACAYLA
CCCCCCEEEECCCCCHHCCCEECCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
YARYTLSPKAREASAQELAA
HHHHCCCCCHHHCCHHHHCC
>Mature Secondary Structure
MKLTYLNDKTVSSLLDYKSVADILGESFADLAAGNAAIHARQRTDSCGIRLSTMGAVWNA
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEHHHHHCC
RQVGGVKVYPTVKEKFSFLITLFDLESNLPIAVLDGGKITKFRTAGLTALIASKAAAKQV
HHCCCEEEEECHHHHHEEEEEEEECCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHH
RKLALFGAGFQGRAQAHALCEIFKFEQISVVDPLGDDSWCSRLALQTGCRVNLCGAEAAV
HHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHC
HDADIVVTATRSLEPVFDGSWLKPGALVSAIGISAPKGRELDDATLSRASRIIVEWMPQS
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEECCCC
EREAGELVLWRPKNARERGKIVDLPELYRQSIPWRGSDEDIIVAKSVGVGLADVACAYLA
CCCCCCEEEECCCCCHHCCCEECCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
YARYTLSPKAREASAQELAA
HHHHCCCCCHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]