Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787092

Identifier: 91787092

GI number: 91787092

Start: 1236456

End: 1237904

Strand: Reverse

Name: 91787092

Synonym: Bpro_1195

Alternate gene names: NA

Gene position: 1237904-1236456 (Counterclockwise)

Preceding gene: 91787093

Following gene: 91787091

Centisome position: 23.8

GC content: 69.57

Gene sequence:

>1449_bases
ATGGGAGAAGCTGCCGCGCTGGTCAACAGCCTGTCCAGGGCATTGCAGGCGGAGCTGATCGAAACCCACATCTCATGGGT
GCTGCTGGCCGGCGACACCGCCTACAAGATCAAGAAACCGGTGCGGCTGGCCTTTGTGGATTACGGCGACCTGGCGGCGC
GGCGTCATTTCTGTGAAGAGGAAGTGCGGCTGAACCAGCGGCTGGCGCCGTCGCTGTACCTGGGGGTCACGCGTATCACC
GGCGCGCCCGGGGCGCCCGTCCTGGACGGCTCCGGGCCCGTGCTGGAGTACGCGGTGCGCATGCGGCGCTTCGCGCCGGG
TGCACTGTTCAGCGAGCAGCTCGCCTCGGACACGCTGCGTGCCGACGACATCGATCGGCTGGCCACCCTGCTCGCCGGGT
TTCATGCGGGTGCGCCGCGGGTTGACGCAACGAGCGATTTCGCCAGCCCCGAACGGCGGCGCGCCAGCGCGCTGGCGGCA
CTCGAAGGCGTGCGGCCGCTGGCGAGCGAGGACGTGTTCGCCGCGCTCCGGGCCTGGCTCGAAGCCGGAGCTGACGCGCT
GACAGCCTTGTGGACCTCCCGCAAGGCGGAGGGCCGCGTACGCGAATGCCATGGCGACCTGCATCTGGCCAATGTGGTCA
CGCACGATGGCGGCGTGGTGGCCTTTGACTGCATCGAGTTTGACCCGGCACTGCGCTGGGTTGATGTGCTCGACGACGTA
ACCTTCGCCGTGATGGACCTCGACGCCCGCGGCCGCCGCGACCTCGCCTTTCGCCTGCTTAACGGCTGGCTCGACCGCAC
CGGCGACCATGGCGGCCTGCCCGCGCTGCGGTTTTCGCTCGTCTATCGCGCGCTGGTGCGGGCGCAGGTGGAACACCTGC
GCCGGGCCAACAGCACCGAGGCGCAACGCTACCTGCAGGCGGCCGTTGGCTGGACACGGCCGGGTGACGTGCGGCTATTC
ATCACCCATGGCCTGCCGGGTTCCGGGAAAACCTTCGCATCACAGCAGTTGCTGGAGCAGCAGGGAGCGATCCGGCTGCG
CTCGGACGTAGAGCGCAAGCGCCTGTTCGGGCTCGGCATGCTCGATGATTCGCGCGCGCAGGGACTGAACCTGTACGACG
CCGACGCCACCGCGCGCACTTACAAACATCTGTTCGAGACGGCGCGCACCGCGCTGCAGGCAGGCTACCCAGTGATCCTC
GATGCGGCGTTCCTGCGCCGTGCGGAACGGGCCCAGGCCCTGGCGCTGGCGCGTTCGCTCAGCGTGCCCTTCGCCATCAT
CGATTGCAAGGCGGCGCTGCCGGTGCTGCGCGCGCGCCTGCTGGGCCGCCGGGGGGACCCGTCCGAGGCAGACACCGCCG
TGCTGGAGCGCCTGCGCGCGGTTGCCGAACCGCTCGCCAGCGACGAGCTTGCCTTTGTCCAGGCCATGCCCGGGGACGGG
GTCCCGTGA

Upstream 100 bases:

>100_bases
ATTTGCATTTTCTTCCCCGTCGCACGCTGCGAGAGAGCTTCCCGTGAACGCCGCGCCCGGTCTGGAAGCTGACGGCACCC
CGCCTGAGGGCGGCAGGCCC

Downstream 100 bases:

>100_bases
TCATTTTGCTGCCCTGCTCCGTCTCGTCCCGCCCGGCCACCGGAACCGGCGCCCCGCGTTGAGCTTTGTCAAGGCCGCGC
GCACCTGCCTTGCCTACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MGEAAALVNSLSRALQAELIETHISWVLLAGDTAYKIKKPVRLAFVDYGDLAARRHFCEEEVRLNQRLAPSLYLGVTRIT
GAPGAPVLDGSGPVLEYAVRMRRFAPGALFSEQLASDTLRADDIDRLATLLAGFHAGAPRVDATSDFASPERRRASALAA
LEGVRPLASEDVFAALRAWLEAGADALTALWTSRKAEGRVRECHGDLHLANVVTHDGGVVAFDCIEFDPALRWVDVLDDV
TFAVMDLDARGRRDLAFRLLNGWLDRTGDHGGLPALRFSLVYRALVRAQVEHLRRANSTEAQRYLQAAVGWTRPGDVRLF
ITHGLPGSGKTFASQQLLEQQGAIRLRSDVERKRLFGLGMLDDSRAQGLNLYDADATARTYKHLFETARTALQAGYPVIL
DAAFLRRAERAQALALARSLSVPFAIIDCKAALPVLRARLLGRRGDPSEADTAVLERLRAVAEPLASDELAFVQAMPGDG
VP

Sequences:

>Translated_482_residues
MGEAAALVNSLSRALQAELIETHISWVLLAGDTAYKIKKPVRLAFVDYGDLAARRHFCEEEVRLNQRLAPSLYLGVTRIT
GAPGAPVLDGSGPVLEYAVRMRRFAPGALFSEQLASDTLRADDIDRLATLLAGFHAGAPRVDATSDFASPERRRASALAA
LEGVRPLASEDVFAALRAWLEAGADALTALWTSRKAEGRVRECHGDLHLANVVTHDGGVVAFDCIEFDPALRWVDVLDDV
TFAVMDLDARGRRDLAFRLLNGWLDRTGDHGGLPALRFSLVYRALVRAQVEHLRRANSTEAQRYLQAAVGWTRPGDVRLF
ITHGLPGSGKTFASQQLLEQQGAIRLRSDVERKRLFGLGMLDDSRAQGLNLYDADATARTYKHLFETARTALQAGYPVIL
DAAFLRRAERAQALALARSLSVPFAIIDCKAALPVLRARLLGRRGDPSEADTAVLERLRAVAEPLASDELAFVQAMPGDG
VP
>Mature_481_residues
GEAAALVNSLSRALQAELIETHISWVLLAGDTAYKIKKPVRLAFVDYGDLAARRHFCEEEVRLNQRLAPSLYLGVTRITG
APGAPVLDGSGPVLEYAVRMRRFAPGALFSEQLASDTLRADDIDRLATLLAGFHAGAPRVDATSDFASPERRRASALAAL
EGVRPLASEDVFAALRAWLEAGADALTALWTSRKAEGRVRECHGDLHLANVVTHDGGVVAFDCIEFDPALRWVDVLDDVT
FAVMDLDARGRRDLAFRLLNGWLDRTGDHGGLPALRFSLVYRALVRAQVEHLRRANSTEAQRYLQAAVGWTRPGDVRLFI
THGLPGSGKTFASQQLLEQQGAIRLRSDVERKRLFGLGMLDDSRAQGLNLYDADATARTYKHLFETARTALQAGYPVILD
AAFLRRAERAQALALARSLSVPFAIIDCKAALPVLRARLLGRRGDPSEADTAVLERLRAVAEPLASDELAFVQAMPGDGV
P

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 52543; Mature: 52411

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEAAALVNSLSRALQAELIETHISWVLLAGDTAYKIKKPVRLAFVDYGDLAARRHFCEE
CCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCEEEEEECCHHHHHHHHHHHH
EVRLNQRLAPSLYLGVTRITGAPGAPVLDGSGPVLEYAVRMRRFAPGALFSEQLASDTLR
HHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
ADDIDRLATLLAGFHAGAPRVDATSDFASPERRRASALAALEGVRPLASEDVFAALRAWL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EAGADALTALWTSRKAEGRVRECHGDLHLANVVTHDGGVVAFDCIEFDPALRWVDVLDDV
HHCHHHHHHHHHCCCCCCCHHHHCCCEEEEHEEECCCCEEEEEEEECCHHHHHHHHHHHH
TFAVMDLDARGRRDLAFRLLNGWLDRTGDHGGLPALRFSLVYRALVRAQVEHLRRANSTE
HHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
AQRYLQAAVGWTRPGDVRLFITHGLPGSGKTFASQQLLEQQGAIRLRSDVERKRLFGLGM
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
LDDSRAQGLNLYDADATARTYKHLFETARTALQAGYPVILDAAFLRRAERAQALALARSL
CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
SVPFAIIDCKAALPVLRARLLGRRGDPSEADTAVLERLRAVAEPLASDELAFVQAMPGDG
CCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
VP
CC
>Mature Secondary Structure 
GEAAALVNSLSRALQAELIETHISWVLLAGDTAYKIKKPVRLAFVDYGDLAARRHFCEE
CHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCEEEEEECCHHHHHHHHHHHH
EVRLNQRLAPSLYLGVTRITGAPGAPVLDGSGPVLEYAVRMRRFAPGALFSEQLASDTLR
HHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
ADDIDRLATLLAGFHAGAPRVDATSDFASPERRRASALAALEGVRPLASEDVFAALRAWL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EAGADALTALWTSRKAEGRVRECHGDLHLANVVTHDGGVVAFDCIEFDPALRWVDVLDDV
HHCHHHHHHHHHCCCCCCCHHHHCCCEEEEHEEECCCCEEEEEEEECCHHHHHHHHHHHH
TFAVMDLDARGRRDLAFRLLNGWLDRTGDHGGLPALRFSLVYRALVRAQVEHLRRANSTE
HHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
AQRYLQAAVGWTRPGDVRLFITHGLPGSGKTFASQQLLEQQGAIRLRSDVERKRLFGLGM
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
LDDSRAQGLNLYDADATARTYKHLFETARTALQAGYPVILDAAFLRRAERAQALALARSL
CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
SVPFAIIDCKAALPVLRARLLGRRGDPSEADTAVLERLRAVAEPLASDELAFVQAMPGDG
CCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
VP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]