| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787093
Identifier: 91787093
GI number: 91787093
Start: 1237958
End: 1238605
Strand: Reverse
Name: 91787093
Synonym: Bpro_1196
Alternate gene names: NA
Gene position: 1238605-1237958 (Counterclockwise)
Preceding gene: 91787096
Following gene: 91787092
Centisome position: 23.82
GC content: 63.12
Gene sequence:
>648_bases ATGTGCTTTTCCGCCACAGCCAGCTTCGCAGTGGGCACCTACCTTCTCGGGGTCGGCACGCTGACCCTGAAGCAGCCGCG CCATCCGCGCGAACTGGCCTTCGCCGCCATCCCGCTGCTGTTCGCCGTCCAGCAGTTGAGCGAGGGCATCCTCTGGCTGA CCTTCGAGCCCGCCATACCCTGGCTCAATGAGGCCATGACACAGGTGTATTCCTTCATGTCCCATGTGTTGTGGCCCATC TATGTCCCGGTCGCCGTGCTGTTGATCGAACCCCCCGGGCCGCGCCGGCGGGCGCTGCTCGCGCTGGTGGGCATAGGGGT CGCGGTGGGCGCCTTCCTGCTGTACCACCTGGTCGACTACCCGGTGAGCTCGCGGCTGACGGGGCAACACATCCAGTACG TCTCGCCGCCGCACTTTCTGGCTACCGCATCAACGCTGTACCTGGTGTCCACCACGCTCAGCCTGATGCTGTCCACGCAT CCGAAAGCGAAGGTCTTCGGCGCCCTGTCACTGCTGTCCTTTGCTGTCGCCTATGGCTTCTACACCACCTGGTTCATTTC GGTCTGGTGCTTCTTTGCCGCCTTGTTGAGCACCGCGGTGTATTTGCATTTTCTTCCCCGTCGCACGCTGCGAGAGAGCT TCCCGTGA
Upstream 100 bases:
>100_bases CCTTCCCTTCATTCCGGACAGTGCCGCAGTCCATGCCAGGACGCTGCGTGACAGGGCATGCCCACGCCAGCGCACCGGCC TTGCAGCAGGAGCAGGCTGA
Downstream 100 bases:
>100_bases ACGCCGCGCCCGGTCTGGAAGCTGACGGCACCCCGCCTGAGGGCGGCAGGCCCATGGGAGAAGCTGCCGCGCTGGTCAAC AGCCTGTCCAGGGCATTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MCFSATASFAVGTYLLGVGTLTLKQPRHPRELAFAAIPLLFAVQQLSEGILWLTFEPAIPWLNEAMTQVYSFMSHVLWPI YVPVAVLLIEPPGPRRRALLALVGIGVAVGAFLLYHLVDYPVSSRLTGQHIQYVSPPHFLATASTLYLVSTTLSLMLSTH PKAKVFGALSLLSFAVAYGFYTTWFISVWCFFAALLSTAVYLHFLPRRTLRESFP
Sequences:
>Translated_215_residues MCFSATASFAVGTYLLGVGTLTLKQPRHPRELAFAAIPLLFAVQQLSEGILWLTFEPAIPWLNEAMTQVYSFMSHVLWPI YVPVAVLLIEPPGPRRRALLALVGIGVAVGAFLLYHLVDYPVSSRLTGQHIQYVSPPHFLATASTLYLVSTTLSLMLSTH PKAKVFGALSLLSFAVAYGFYTTWFISVWCFFAALLSTAVYLHFLPRRTLRESFP >Mature_215_residues MCFSATASFAVGTYLLGVGTLTLKQPRHPRELAFAAIPLLFAVQQLSEGILWLTFEPAIPWLNEAMTQVYSFMSHVLWPI YVPVAVLLIEPPGPRRRALLALVGIGVAVGAFLLYHLVDYPVSSRLTGQHIQYVSPPHFLATASTLYLVSTTLSLMLSTH PKAKVFGALSLLSFAVAYGFYTTWFISVWCFFAALLSTAVYLHFLPRRTLRESFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23853; Mature: 23853
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCFSATASFAVGTYLLGVGTLTLKQPRHPRELAFAAIPLLFAVQQLSEGILWLTFEPAIP CCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC WLNEAMTQVYSFMSHVLWPIYVPVAVLLIEPPGPRRRALLALVGIGVAVGAFLLYHLVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PVSSRLTGQHIQYVSPPHFLATASTLYLVSTTLSLMLSTHPKAKVFGALSLLSFAVAYGF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YTTWFISVWCFFAALLSTAVYLHFLPRRTLRESFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MCFSATASFAVGTYLLGVGTLTLKQPRHPRELAFAAIPLLFAVQQLSEGILWLTFEPAIP CCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC WLNEAMTQVYSFMSHVLWPIYVPVAVLLIEPPGPRRRALLALVGIGVAVGAFLLYHLVDY HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PVSSRLTGQHIQYVSPPHFLATASTLYLVSTTLSLMLSTHPKAKVFGALSLLSFAVAYGF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YTTWFISVWCFFAALLSTAVYLHFLPRRTLRESFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA