| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786955
Identifier: 91786955
GI number: 91786955
Start: 1084572
End: 1085117
Strand: Reverse
Name: 91786955
Synonym: Bpro_1057
Alternate gene names: NA
Gene position: 1085117-1084572 (Counterclockwise)
Preceding gene: 91786959
Following gene: 91786953
Centisome position: 20.87
GC content: 64.84
Gene sequence:
>546_bases ATGCGCATTCCCGAATGGAGCCCCAGCCTCAAGGCCCAACCGCAGGATCTGGTGGACGCCATCCTGGCGCGCCGGGGCGG CACCATGATCAACCTCGACAAGGCGCTGCTGTGGAGCGAGCCGCTGGCGCGGGCCTGGAACATCTACCTGGGCGCGGTGC GCACCGGGCTGCCAACCAGCCGCAAGCTGCGCGAACTGGGCATTTGCACCGTGGCACTGCTGACCGGCGCCGACTACGAA TACCGTCACCATGCACCGGACTTCCTGGCCGCCGGTGGCAGCCAGTCCGAGCTGGATGCACTCCAGGCCCTGGTCAAAAG CGATGCGCGCCAAACCACGGCGCATCCGGCGCTGGGTGCGGTGGAGCAGTTGTTGATTCAATACGCCGCGCAAATGACGC TGGACGTCAAGGTCAGCGACCAGGTGTTCGCGGCACTGCGCGAGCATTTTGACAACACGGAACTGGTCGAACTGACCAGC GCGATTGCCACCTACAACATGGTGGCGCGTTTTCTGGTGGCGCTGGGCGTATCGCCGGAGGAATGA
Upstream 100 bases:
>100_bases CGCCATTATCCGCCGACCTCATCCGCCAACCTTACCCGCCGACGCTGCGCCTTGCCGCTTTGCGGCGCCGACCACCGCCC CTCAACCACGAAAGACAAGC
Downstream 100 bases:
>100_bases ATCGGGTCACGGCGAGATACCAGGCCGCGCACACACTGAAAGCGCGGGGCCGACAATTTCCCGCCGTGCCGCCCCAAGGC GCAACAGCCCACTCAGGGGC
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase Family; Alkylhydroperoxidase AhpD Family Core Domain-Containing
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTSRKLRELGICTVALLTGADYE YRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGAVEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTS AIATYNMVARFLVALGVSPEE
Sequences:
>Translated_181_residues MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTSRKLRELGICTVALLTGADYE YRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGAVEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTS AIATYNMVARFLVALGVSPEE >Mature_181_residues MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTSRKLRELGICTVALLTGADYE YRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGAVEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTS AIATYNMVARFLVALGVSPEE
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19800; Mature: 19800
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTS CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RKLRELGICTVALLTGADYEYRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGA HHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH VEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTSAIATYNMVARFLVALGVSPE HHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC E C >Mature Secondary Structure MRIPEWSPSLKAQPQDLVDAILARRGGTMINLDKALLWSEPLARAWNIYLGAVRTGLPTS CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RKLRELGICTVALLTGADYEYRHHAPDFLAAGGSQSELDALQALVKSDARQTTAHPALGA HHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH VEQLLIQYAAQMTLDVKVSDQVFAALREHFDNTELVELTSAIATYNMVARFLVALGVSPE HHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA