| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786950
Identifier: 91786950
GI number: 91786950
Start: 1078241
End: 1078882
Strand: Reverse
Name: 91786950
Synonym: Bpro_1051
Alternate gene names: NA
Gene position: 1078882-1078241 (Counterclockwise)
Preceding gene: 91786951
Following gene: 91786949
Centisome position: 20.75
GC content: 64.17
Gene sequence:
>642_bases ATGGACATCGATTTCTCAGCCATCACCGAATACCAGCGCTACAAGCTCATGGCCAGCCTGATCGTGCCGCGGCCGATTGC GCTGATCACCACGTTGAGCGAAGACGGCGTCGTCAATGCGGCGCCCTTCAGCATGTTCAATATGCTGGGTGAAGAGCCGC CCATCGTGATGGTCAGCATCAACCGGCTGCAGGACGGCCAGCTCAAGCACACAGCGGCCAACATCGTGCGCACCGGCGAG TTCGTCGTGCACCTGACCGACGAAGCCATGGCCGGGCAGATGCACCGCTGCGGCGAGCGCTTTCCGGCCGACGTCAGCGA GCTGGCCGAGGTGGGGCTCAGCACGGCGCCCTCCCGGCATGTGAAGCCGCCGCGCATTGCGGAGGCACCCGCGGCCTTCG AGTGCACGCTGTACGAGCTGCTCGAGACGCCCAGCCGGCAAATTTTTATCGGCCGGGTGCACTGGCTGCATGCCCGCGAC GGACTCATCGACACCGAGCTGTGGCGCGTGCGCTTGCAGAACTACTTTCCGGTGGCGCGCTTTGGGGCCAGCTTCTACAT CAACACACGGGAACGCTTCTCGCTGGAAGCCGCCAGTGCACAGGCCCAGCCTGCGCTGTCCACCAGCATTGACGAGATCT GA
Upstream 100 bases:
>100_bases CGGCCCAGCCGCTAAATCGCCGACTGTACCGCCCGCTGTATCGCCTGGTGCGCGGCCCGGGCCCATCCGCCATCGCAAGC CAACCGACAAAGAACTGACC
Downstream 100 bases:
>100_bases CAACGGATGTGACGGGGGTGCCGCAAGGGGTAAACCCGGAGCCTGGCCGGTTTATACTTTTTTGATTTGGCCTGCAGGCC CCATCAACCCAACCCAGCGA
Product: flavin reductase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDIDFSAITEYQRYKLMASLIVPRPIALITTLSEDGVVNAAPFSMFNMLGEEPPIVMVSINRLQDGQLKHTAANIVRTGE FVVHLTDEAMAGQMHRCGERFPADVSELAEVGLSTAPSRHVKPPRIAEAPAAFECTLYELLETPSRQIFIGRVHWLHARD GLIDTELWRVRLQNYFPVARFGASFYINTRERFSLEAASAQAQPALSTSIDEI
Sequences:
>Translated_213_residues MDIDFSAITEYQRYKLMASLIVPRPIALITTLSEDGVVNAAPFSMFNMLGEEPPIVMVSINRLQDGQLKHTAANIVRTGE FVVHLTDEAMAGQMHRCGERFPADVSELAEVGLSTAPSRHVKPPRIAEAPAAFECTLYELLETPSRQIFIGRVHWLHARD GLIDTELWRVRLQNYFPVARFGASFYINTRERFSLEAASAQAQPALSTSIDEI >Mature_213_residues MDIDFSAITEYQRYKLMASLIVPRPIALITTLSEDGVVNAAPFSMFNMLGEEPPIVMVSINRLQDGQLKHTAANIVRTGE FVVHLTDEAMAGQMHRCGERFPADVSELAEVGLSTAPSRHVKPPRIAEAPAAFECTLYELLETPSRQIFIGRVHWLHARD GLIDTELWRVRLQNYFPVARFGASFYINTRERFSLEAASAQAQPALSTSIDEI
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 23804; Mature: 23804
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDFSAITEYQRYKLMASLIVPRPIALITTLSEDGVVNAAPFSMFNMLGEEPPIVMVSI CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEE NRLQDGQLKHTAANIVRTGEFVVHLTDEAMAGQMHRCGERFPADVSELAEVGLSTAPSRH CCCCCCCHHHHHHHHEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC VKPPRIAEAPAAFECTLYELLETPSRQIFIGRVHWLHARDGLIDTELWRVRLQNYFPVAR CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHH FGASFYINTRERFSLEAASAQAQPALSTSIDEI CCCEEEEECHHHHEEHHHCCCCCCCHHHHCCCC >Mature Secondary Structure MDIDFSAITEYQRYKLMASLIVPRPIALITTLSEDGVVNAAPFSMFNMLGEEPPIVMVSI CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEE NRLQDGQLKHTAANIVRTGEFVVHLTDEAMAGQMHRCGERFPADVSELAEVGLSTAPSRH CCCCCCCHHHHHHHHEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC VKPPRIAEAPAAFECTLYELLETPSRQIFIGRVHWLHARDGLIDTELWRVRLQNYFPVAR CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHH FGASFYINTRERFSLEAASAQAQPALSTSIDEI CCCEEEEECHHHHEEHHHCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]