| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hisJ [H]
Identifier: 91786949
GI number: 91786949
Start: 1077273
End: 1078133
Strand: Reverse
Name: hisJ [H]
Synonym: Bpro_1050
Alternate gene names: 91786949
Gene position: 1078133-1077273 (Counterclockwise)
Preceding gene: 91786950
Following gene: 91786948
Centisome position: 20.73
GC content: 59.23
Gene sequence:
>861_bases ATGCCTTCCATCACGACACGATATTTCCTGCAAACTGCCGGCACCCTGCTGGCCAGCCTGGTGCTGGTGGCCTGCGGCAA GCAGGAGCCACCGGCACCAGCGGCCACCGCGCCAGCACCCGCCGCCTCGGCGCCCGCGCCGGCAGCCCGGGTGTATGTGG TCGGCACCGACGCCGCCTATGCCCCTTTTGAATCGCAAAACGAAAAAGGCGAGATCGTTGGTTTTGATATCGACGTGGTC AAGGCCGTGGCACAAAAAGCCGGCATCGAGGTGAAATTCATCAATACGCCCTGGGAGGGCATCTTCAATTCACTGAACCA GGGCGACCGCGACCTGCTGGTTTCCGCGATCACGATCACCCCCGAGCGCAAGCAGACCATGGATTTTTCTTCGCCCTACT TTGACGCACAACAACTGATTGCTGTGAAGAAAGACTCCAAAATCGCCGACTTCAGCCACCTGAAAAAACTCAAGGTGGCC GTGCAGAACGGCACCACCGGCGACGAGGTGGTCACCAAGCTGCAGGGCAAGGCCAGCCCCAACATCAAACGTTTCGAGTC CACCCTACTGGCCCTGAAAGAGCTGGAAGCCGGTGGCGTGGATGCCGTAGTGGCTGACAACGGCGTGGTGGTGCACTATG TCAACAACAACGTCGGCGCCAAGTTCAAGACCATCAGCGACGCCAGCTTTGCGGCCGAGCAATATGGCCTGGCGGTGAAA AAGGGCAACACCGAATTGCTGGAAAAACTCAACAAGGGCCTGGCCGACATCAAGACCGACGGCACCTACAACAAGATTTA CGCCCAGTATTTTGGCGGGGCACCGGCGGCACCTGCACCTGCACCCGCGGCATCGAAATAA
Upstream 100 bases:
>100_bases TGTGACGGGGGTGCCGCAAGGGGTAAACCCGGAGCCTGGCCGGTTTATACTTTTTTGATTTGGCCTGCAGGCCCCATCAA CCCAACCCAGCGAGGTCTTC
Downstream 100 bases:
>100_bases GCGAACCGCAAGGAAAACGGGCCCCGTTCGCTTCGGCGTACGGGGCCCGTTTTTTTGATAAAAGTGTGAAGCCCGCCGAT AAGCCGGATTCTGTGCGCCG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPSITTRYFLQTAGTLLASLVLVACGKQEPPAPAATAPAPAASAPAPAARVYVVGTDAAYAPFESQNEKGEIVGFDIDVV KAVAQKAGIEVKFINTPWEGIFNSLNQGDRDLLVSAITITPERKQTMDFSSPYFDAQQLIAVKKDSKIADFSHLKKLKVA VQNGTTGDEVVTKLQGKASPNIKRFESTLLALKELEAGGVDAVVADNGVVVHYVNNNVGAKFKTISDASFAAEQYGLAVK KGNTELLEKLNKGLADIKTDGTYNKIYAQYFGGAPAAPAPAPAASK
Sequences:
>Translated_286_residues MPSITTRYFLQTAGTLLASLVLVACGKQEPPAPAATAPAPAASAPAPAARVYVVGTDAAYAPFESQNEKGEIVGFDIDVV KAVAQKAGIEVKFINTPWEGIFNSLNQGDRDLLVSAITITPERKQTMDFSSPYFDAQQLIAVKKDSKIADFSHLKKLKVA VQNGTTGDEVVTKLQGKASPNIKRFESTLLALKELEAGGVDAVVADNGVVVHYVNNNVGAKFKTISDASFAAEQYGLAVK KGNTELLEKLNKGLADIKTDGTYNKIYAQYFGGAPAAPAPAPAASK >Mature_285_residues PSITTRYFLQTAGTLLASLVLVACGKQEPPAPAATAPAPAASAPAPAARVYVVGTDAAYAPFESQNEKGEIVGFDIDVVK AVAQKAGIEVKFINTPWEGIFNSLNQGDRDLLVSAITITPERKQTMDFSSPYFDAQQLIAVKKDSKIADFSHLKKLKVAV QNGTTGDEVVTKLQGKASPNIKRFESTLLALKELEAGGVDAVVADNGVVVHYVNNNVGAKFKTISDASFAAEQYGLAVKK GNTELLEKLNKGLADIKTDGTYNKIYAQYFGGAPAAPAPAPAASK
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=230, Percent_Identity=35.2173913043478, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1787088, Length=236, Percent_Identity=33.8983050847458, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1787031, Length=245, Percent_Identity=34.6938775510204, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788648, Length=224, Percent_Identity=30.8035714285714, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1788228, Length=224, Percent_Identity=28.125, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788649, Length=239, Percent_Identity=27.1966527196653, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30161; Mature: 30029
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSITTRYFLQTAGTLLASLVLVACGKQEPPAPAATAPAPAASAPAPAARVYVVGTDAAY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC APFESQNEKGEIVGFDIDVVKAVAQKAGIEVKFINTPWEGIFNSLNQGDRDLLVSAITIT CCCCCCCCCCCEEEECHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCHHEEEEEEEEC PERKQTMDFSSPYFDAQQLIAVKKDSKIADFSHLKKLKVAVQNGTTGDEVVTKLQGKASP CCHHHCCCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC NIKRFESTLLALKELEAGGVDAVVADNGVVVHYVNNNVGAKFKTISDASFAAEQYGLAVK CHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEECCCHHHHHHHHCEEEE KGNTELLEKLNKGLADIKTDGTYNKIYAQYFGGAPAAPAPAPAASK CCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PSITTRYFLQTAGTLLASLVLVACGKQEPPAPAATAPAPAASAPAPAARVYVVGTDAAY CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC APFESQNEKGEIVGFDIDVVKAVAQKAGIEVKFINTPWEGIFNSLNQGDRDLLVSAITIT CCCCCCCCCCCEEEECHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCHHEEEEEEEEC PERKQTMDFSSPYFDAQQLIAVKKDSKIADFSHLKKLKVAVQNGTTGDEVVTKLQGKASP CCHHHCCCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC NIKRFESTLLALKELEAGGVDAVVADNGVVVHYVNNNVGAKFKTISDASFAAEQYGLAVK CHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEECCCHHHHHHHHCEEEE KGNTELLEKLNKGLADIKTDGTYNKIYAQYFGGAPAAPAPAPAASK CCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1448614 [H]