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The map label for this gene is ydfH [C]

Identifier: 91786951

GI number: 91786951

Start: 1079003

End: 1079749

Strand: Reverse

Name: ydfH [C]

Synonym: Bpro_1052

Alternate gene names: 91786951

Gene position: 1079749-1079003 (Counterclockwise)

Preceding gene: 91786952

Following gene: 91786950

Centisome position: 20.76

GC content: 68.14

Gene sequence:

>747_bases
ATGAGTACCGCCAGGAAACGCGCACCCGCGCCCGCCACCGGCATGCCGGCCGACGCCGCCGCTCCCCTGCTGCCCGGCCT
GTCGGAGACGGAAAGCCGCATCTACCACTCGGTGTTTGACAGCGTGATGAACCAGCGCATCGCCCCGGGCACCAAGCTGC
CGGAGCAGGCGCTGTGCGAGCTGTTCTCGGTGAACCGCGCCACGGTGCGCAAGGTGCTGCAGCGGCTGGCCCATGATCAC
ATCGTCGACCTGCGGCCCAATCGCGGCGCGGTAGTGGCCGCCCCCACGCCCGAAGAAACGCGGCAGATCTTCCAGGCCCG
GCGCCTGCTCGAAGCGGCCATCGTGCCGCTGGTGGCCCAGCGCATCACCAAGGCCGAGATTTTGCTGTTGCGCAAACAGT
TGCGCGACGAGCATGCGGCACTGCACCGCGCGGACCAGCCGGCCTGGGCGCGCCTGGCAAGCACCTTCCATCTGCGGCTG
GCCGAACTGTCGGGCAACGCGGTGCTGCACGGCTACCTGCACGAACTGGTGTCCCGCTGCTCGCTGATCGTCGCCCTGTA
CGAGCCGCCCGGGAACGCCGCCTGCGAGCATGACGAACACGCGCGCATCGTGGATTACCTGGAAAACGGGGAACCCGCCA
AGGCGGTACGCGTCATGAACGAGCACCTGCTCGACCTGGAACGCCGCATCTGCCTGGACAAACCCCAGGCCGAAAAAAGC
CTGGCCCAGATGCTGGGGCTGGCCTGA

Upstream 100 bases:

>100_bases
TGGAACATCTGGCGCGCCTGCGCGATGAAGGCCGCATCTGGTTCACCACGCCCGGCGCCATCTGCGCCCACATGAACGAG
GTTTTCCCCGGAGCAGCCGC

Downstream 100 bases:

>100_bases
CATGCTGCGCGTCATGCTGGCGGCCCAGCCGCTAAATCGCCGACTGTACCGCCCGCTGTATCGCCTGGTGCGCGGCCCGG
GCCCATCCGCCATCGCAAGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein GntR Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator Gntr Family; GntR Family Regulatory Protein; Transcriptional Regulator GntR Family Protein; GntR Family Transcription Regulator Protein; NTA Operon Transcriptional Regulator Related Protein; GntR Domain-Containing Protein; GntR-Like; Transcription Regulator HTH GntR; Regulatory Protein; Bacterial Regulatory Protein; GntR Family Transcription Regulator; GntR-Family Protein Transcriptional Regulator; Transcription Regulator Protein; FCD Domain Protein; GntR Domain Protein; Transcriptional Regulator NanR; GntR-Type Regulator; TRANSCRIPTIONal REGULATOR GntR Family

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSTARKRAPAPATGMPADAAAPLLPGLSETESRIYHSVFDSVMNQRIAPGTKLPEQALCELFSVNRATVRKVLQRLAHDH
IVDLRPNRGAVVAAPTPEETRQIFQARRLLEAAIVPLVAQRITKAEILLLRKQLRDEHAALHRADQPAWARLASTFHLRL
AELSGNAVLHGYLHELVSRCSLIVALYEPPGNAACEHDEHARIVDYLENGEPAKAVRVMNEHLLDLERRICLDKPQAEKS
LAQMLGLA

Sequences:

>Translated_248_residues
MSTARKRAPAPATGMPADAAAPLLPGLSETESRIYHSVFDSVMNQRIAPGTKLPEQALCELFSVNRATVRKVLQRLAHDH
IVDLRPNRGAVVAAPTPEETRQIFQARRLLEAAIVPLVAQRITKAEILLLRKQLRDEHAALHRADQPAWARLASTFHLRL
AELSGNAVLHGYLHELVSRCSLIVALYEPPGNAACEHDEHARIVDYLENGEPAKAVRVMNEHLLDLERRICLDKPQAEKS
LAQMLGLA
>Mature_247_residues
STARKRAPAPATGMPADAAAPLLPGLSETESRIYHSVFDSVMNQRIAPGTKLPEQALCELFSVNRATVRKVLQRLAHDHI
VDLRPNRGAVVAAPTPEETRQIFQARRLLEAAIVPLVAQRITKAEILLLRKQLRDEHAALHRADQPAWARLASTFHLRLA
ELSGNAVLHGYLHELVSRCSLIVALYEPPGNAACEHDEHARIVDYLENGEPAKAVRVMNEHLLDLERRICLDKPQAEKSL
AQMLGLA

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27455; Mature: 27324

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50949 HTH_GNTR ; PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTARKRAPAPATGMPADAAAPLLPGLSETESRIYHSVFDSVMNQRIAPGTKLPEQALCE
CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LFSVNRATVRKVLQRLAHDHIVDLRPNRGAVVAAPTPEETRQIFQARRLLEAAIVPLVAQ
HHHCCHHHHHHHHHHHHHHCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
RITKAEILLLRKQLRDEHAALHRADQPAWARLASTFHLRLAELSGNAVLHGYLHELVSRC
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SLIVALYEPPGNAACEHDEHARIVDYLENGEPAKAVRVMNEHLLDLERRICLDKPQAEKS
HEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAQMLGLA
HHHHHCCC
>Mature Secondary Structure 
STARKRAPAPATGMPADAAAPLLPGLSETESRIYHSVFDSVMNQRIAPGTKLPEQALCE
CCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LFSVNRATVRKVLQRLAHDHIVDLRPNRGAVVAAPTPEETRQIFQARRLLEAAIVPLVAQ
HHHCCHHHHHHHHHHHHHHCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
RITKAEILLLRKQLRDEHAALHRADQPAWARLASTFHLRLAELSGNAVLHGYLHELVSRC
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SLIVALYEPPGNAACEHDEHARIVDYLENGEPAKAVRVMNEHLLDLERRICLDKPQAEKS
HEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAQMLGLA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA