Click here to switch to the map view.

The map label for this gene is ywhC [H]

Identifier: 91786902

GI number: 91786902

Start: 1018151

End: 1018819

Strand: Reverse

Name: ywhC [H]

Synonym: Bpro_1002

Alternate gene names: 91786902

Gene position: 1018819-1018151 (Counterclockwise)

Preceding gene: 91786903

Following gene: 91786901

Centisome position: 19.59

GC content: 61.29

Gene sequence:

>669_bases
ATGGACATCGCCAACCTGATTCAAACCGTCGCCATTTATGCGCTGCCTGTGCTGTACGCCATCACGGTGCACGAAGCGGC
GCACGGCTATGTAGCCCGCCATTTCGGTGACAACACCGCCTGGGTGCAGGGCCGCGTGACACTCAACCCCATCAAGCATA
TTGACCCGCTGGGCACCATCGTGATGCCGCTGGTGCTTTACCTGGCCACATCGGGCGCATTTTTGTTCGGCTACGCCAAG
CCGGTCCCGGTGGAGTTTGGCAACCTGCGCAACCCCAAGCGCGACATGGTCTGGGTGGCGCTGGCCGGTCCCGGCGCCAA
TCTCCTTCAAGCCTTGCTCTGGGGCATCCTGCTGTACTTGCTGCGCGGCGCCGACATCACCGAACCGTTTTTCATCCGGA
TGTGCCAGGCGGGCGTGCTGGTCAATGTGGTGATGTTTGTCTTCAATCTGTTTCCGCTGCCACCGCTCGATGGTGGCCGC
ATTCTGGTGGGCCTGTTGCCCTACAAGCAGGCGGTGCTGGTGTCGCGCATCGAGCCCTGGGGCTTTTTTGTGGTGATGGC
GCTGGTGCTTGCCGGCGTGATCAGCAATCTCTGGATGCGCCCGCTGATGGCGCTGACCTACACCTTTCTGGAAACCGTGT
TGATGCCCCTGGCCATGCTGGTGCGATGA

Upstream 100 bases:

>100_bases
CGGCGAGCCGGTGGTGGTCCGCCAGGGCCGCGGCGACCTGGCTGCGCTGGGCCTGTGAGCCCCTGTTAGAGCCTTTAAGC
GCGTCTGAGACAATCCGGGC

Downstream 100 bases:

>100_bases
TGATGACAAACCCAACAACTGACGCCGGCGCGCGTTCTACCCCTGACGCCTCACCACAGAGGTTCCTGACCGGCATCACC
ACCACGGGTACGCCCCACCT

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDIANLIQTVAIYALPVLYAITVHEAAHGYVARHFGDNTAWVQGRVTLNPIKHIDPLGTIVMPLVLYLATSGAFLFGYAK
PVPVEFGNLRNPKRDMVWVALAGPGANLLQALLWGILLYLLRGADITEPFFIRMCQAGVLVNVVMFVFNLFPLPPLDGGR
ILVGLLPYKQAVLVSRIEPWGFFVVMALVLAGVISNLWMRPLMALTYTFLETVLMPLAMLVR

Sequences:

>Translated_222_residues
MDIANLIQTVAIYALPVLYAITVHEAAHGYVARHFGDNTAWVQGRVTLNPIKHIDPLGTIVMPLVLYLATSGAFLFGYAK
PVPVEFGNLRNPKRDMVWVALAGPGANLLQALLWGILLYLLRGADITEPFFIRMCQAGVLVNVVMFVFNLFPLPPLDGGR
ILVGLLPYKQAVLVSRIEPWGFFVVMALVLAGVISNLWMRPLMALTYTFLETVLMPLAMLVR
>Mature_222_residues
MDIANLIQTVAIYALPVLYAITVHEAAHGYVARHFGDNTAWVQGRVTLNPIKHIDPLGTIVMPLVLYLATSGAFLFGYAK
PVPVEFGNLRNPKRDMVWVALAGPGANLLQALLWGILLYLLRGADITEPFFIRMCQAGVLVNVVMFVFNLFPLPPLDGGR
ILVGLLPYKQAVLVSRIEPWGFFVVMALVLAGVISNLWMRPLMALTYTFLETVLMPLAMLVR

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24545; Mature: 24545

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIANLIQTVAIYALPVLYAITVHEAAHGYVARHFGDNTAWVQGRVTLNPIKHIDPLGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHCCHHHHH
VMPLVLYLATSGAFLFGYAKPVPVEFGNLRNPKRDMVWVALAGPGANLLQALLWGILLYL
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LRGADITEPFFIRMCQAGVLVNVVMFVFNLFPLPPLDGGRILVGLLPYKQAVLVSRIEPW
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCH
GFFVVMALVLAGVISNLWMRPLMALTYTFLETVLMPLAMLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDIANLIQTVAIYALPVLYAITVHEAAHGYVARHFGDNTAWVQGRVTLNPIKHIDPLGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHCCHHHHH
VMPLVLYLATSGAFLFGYAKPVPVEFGNLRNPKRDMVWVALAGPGANLLQALLWGILLYL
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LRGADITEPFFIRMCQAGVLVNVVMFVFNLFPLPPLDGGRILVGLLPYKQAVLVSRIEPW
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCH
GFFVVMALVLAGVISNLWMRPLMALTYTFLETVLMPLAMLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]