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The map label for this gene is yciO [H]

Identifier: 91786903

GI number: 91786903

Start: 1018862

End: 1019509

Strand: Reverse

Name: yciO [H]

Synonym: Bpro_1003

Alternate gene names: 91786903

Gene position: 1019509-1018862 (Counterclockwise)

Preceding gene: 91786904

Following gene: 91786902

Centisome position: 19.6

GC content: 68.52

Gene sequence:

>648_bases
ATGGCCCAGTTTTTCGAAGTTCATCCCGACAACCCCCAGCTGCGGCTGCTCAAGCAGGCGGTGAACCTGCTGGCGCGCGG
GGGCGTCGCCGCCGTACCCACCGACTCCAGCTACGCGCTGGTCTGCCACCTGGACGACAAGGCCGCGGCCGACAGCCTGC
GCCGTATTCGCGGGGTGGATGACAAGCACCATCTCACGCTGCTGTGCCGCGACCTGAGCGAGCTGGCCAACTATGCACGC
GTCGACAACAAGCAGTTTCGCCTGCTCAAGGCGGCCACGCCCGGGCCCTACACCTTCATCCTGGAAGCCAGCAAGGAAGT
GCCGCGGCGTCTCAGCCACCCGTCGCGCAAGACCATAGGCCTGCGCGTGCCGGGGCACAAGACCCTGCAGGCCCTGCTGG
AGCTGCATGGCGCGCCCTTGCTGGCCACCACGCTGATACTGCCCGGCCCCGACAATCCGCCCCACGAACCACTCAACGAT
GCACGCGACATCCGCGACCAGCTGGAGCATGAACTGGCCGCCGTGATTGATGCAGGCGCCTGCCACCAGGCGCCCACCAC
CGTGATCGACCTCACCCCCATGGGCGAGGGCGGCGAGCCGGTGGTGGTCCGCCAGGGCCGCGGCGACCTGGCTGCGCTGG
GCCTGTGA

Upstream 100 bases:

>100_bases
CGGCATAGCCCTGATTGCGACGTGCGGCGCGGCCGGCGCGTGGCTTTCGGTGCGCGAGACCCGGGTCCCTGTTGCCCCCC
CTGAATCCTGAAACACCGCC

Downstream 100 bases:

>100_bases
GCCCCTGTTAGAGCCTTTAAGCGCGTCTGAGACAATCCGGGCATGGACATCGCCAACCTGATTCAAACCGTCGCCATTTA
TGCGCTGCCTGTGCTGTACG

Product: Sua5/YciO/YrdC/YwlC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MAQFFEVHPDNPQLRLLKQAVNLLARGGVAAVPTDSSYALVCHLDDKAAADSLRRIRGVDDKHHLTLLCRDLSELANYAR
VDNKQFRLLKAATPGPYTFILEASKEVPRRLSHPSRKTIGLRVPGHKTLQALLELHGAPLLATTLILPGPDNPPHEPLND
ARDIRDQLEHELAAVIDAGACHQAPTTVIDLTPMGEGGEPVVVRQGRGDLAALGL

Sequences:

>Translated_215_residues
MAQFFEVHPDNPQLRLLKQAVNLLARGGVAAVPTDSSYALVCHLDDKAAADSLRRIRGVDDKHHLTLLCRDLSELANYAR
VDNKQFRLLKAATPGPYTFILEASKEVPRRLSHPSRKTIGLRVPGHKTLQALLELHGAPLLATTLILPGPDNPPHEPLND
ARDIRDQLEHELAAVIDAGACHQAPTTVIDLTPMGEGGEPVVVRQGRGDLAALGL
>Mature_214_residues
AQFFEVHPDNPQLRLLKQAVNLLARGGVAAVPTDSSYALVCHLDDKAAADSLRRIRGVDDKHHLTLLCRDLSELANYARV
DNKQFRLLKAATPGPYTFILEASKEVPRRLSHPSRKTIGLRVPGHKTLQALLELHGAPLLATTLILPGPDNPPHEPLNDA
RDIRDQLEHELAAVIDAGACHQAPTTVIDLTPMGEGGEPVVVRQGRGDLAALGL

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Homo sapiens, GI58761510, Length=197, Percent_Identity=31.9796954314721, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI87081864, Length=210, Percent_Identity=52.8571428571429, Blast_Score=221, Evalue=4e-59,
Organism=Drosophila melanogaster, GI78707274, Length=203, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 23326; Mature: 23195

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFFEVHPDNPQLRLLKQAVNLLARGGVAAVPTDSSYALVCHLDDKAAADSLRRIRGVD
CCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCHHHHHHHHHHHCCC
DKHHLTLLCRDLSELANYARVDNKQFRLLKAATPGPYTFILEASKEVPRRLSHPSRKTIG
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCEEE
LRVPGHKTLQALLELHGAPLLATTLILPGPDNPPHEPLNDARDIRDQLEHELAAVIDAGA
EECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
CHQAPTTVIDLTPMGEGGEPVVVRQGRGDLAALGL
CCCCCCEEEEEEECCCCCCEEEEECCCCCEEECCC
>Mature Secondary Structure 
AQFFEVHPDNPQLRLLKQAVNLLARGGVAAVPTDSSYALVCHLDDKAAADSLRRIRGVD
CCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCHHHHHHHHHHHCCC
DKHHLTLLCRDLSELANYARVDNKQFRLLKAATPGPYTFILEASKEVPRRLSHPSRKTIG
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCEEE
LRVPGHKTLQALLELHGAPLLATTLILPGPDNPPHEPLNDARDIRDQLEHELAAVIDAGA
EECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
CHQAPTTVIDLTPMGEGGEPVVVRQGRGDLAALGL
CCCCCCEEEEEEECCCCCCEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]