| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786588
Identifier: 91786588
GI number: 91786588
Start: 698296
End: 698709
Strand: Direct
Name: 91786588
Synonym: Bpro_0684
Alternate gene names: NA
Gene position: 698296-698709 (Clockwise)
Preceding gene: 91786587
Following gene: 91786595
Centisome position: 13.43
GC content: 55.07
Gene sequence:
>414_bases ATGACTTTTTCCAGCAACAACGAATTCACTTCACGCGCACTCTCAGTCCTGCGCATTGTTTCGGCTTATTTGCTTATTCA GCATGGCGCGGCCAAGCTGCTGGGCTTTCCTCATGTAGCTTTTTTTGACGGGCTGCAGATCTTTTCCATGCTCGGTGCCG CAGGCATCCTTGAACTCGTTGGCGGGGCGCTGCTGTTGATAGGCTTGTTCACGCGTCCCGTGGCTTTTGTATTGTCTGGC TTGCTGGCGTTTGCCTACTTCATTGGCCATGCGTCCAAGGGCTTTGTGTTGTCGCCCATGCTCAACCAGGGTGAGGCTGC CGTGCTGTTCTGCTTTGTCTTTTTGTTCATTGCGGTGGCAGGTGCCGGCGTCTGGAGCGTGGATGCCATGCGCCTGGCGA AGAAGGGTGCCTAA
Upstream 100 bases:
>100_bases GTCGCTCGTGAACGCATCCACTGATACCGGTTTTAATTAAATCAGCATTGAACTTTTTCATCTCACCCCTGTCAGATTTC CTTTTTAACGGAGGGAATCC
Downstream 100 bases:
>100_bases AGTAGGACCGTGCGCAGGACCGTGCGCAGGACCGTGCAAGGGTCCGCCAGAAAGTCTTGAATTCGACCTCGAATCGGACG AGGCCTGCATAGCCCATCAA
Product: DoxX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTFSSNNEFTSRALSVLRIVSAYLLIQHGAAKLLGFPHVAFFDGLQIFSMLGAAGILELVGGALLLIGLFTRPVAFVLSG LLAFAYFIGHASKGFVLSPMLNQGEAAVLFCFVFLFIAVAGAGVWSVDAMRLAKKGA
Sequences:
>Translated_137_residues MTFSSNNEFTSRALSVLRIVSAYLLIQHGAAKLLGFPHVAFFDGLQIFSMLGAAGILELVGGALLLIGLFTRPVAFVLSG LLAFAYFIGHASKGFVLSPMLNQGEAAVLFCFVFLFIAVAGAGVWSVDAMRLAKKGA >Mature_136_residues TFSSNNEFTSRALSVLRIVSAYLLIQHGAAKLLGFPHVAFFDGLQIFSMLGAAGILELVGGALLLIGLFTRPVAFVLSGL LAFAYFIGHASKGFVLSPMLNQGEAAVLFCFVFLFIAVAGAGVWSVDAMRLAKKGA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 14473; Mature: 14342
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSSNNEFTSRALSVLRIVSAYLLIQHGAAKLLGFPHVAFFDGLQIFSMLGAAGILELV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GGALLLIGLFTRPVAFVLSGLLAFAYFIGHASKGFVLSPMLNQGEAAVLFCFVFLFIAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH GAGVWSVDAMRLAKKGA CCCHHHHHHHHHHHCCC >Mature Secondary Structure TFSSNNEFTSRALSVLRIVSAYLLIQHGAAKLLGFPHVAFFDGLQIFSMLGAAGILELV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GGALLLIGLFTRPVAFVLSGLLAFAYFIGHASKGFVLSPMLNQGEAAVLFCFVFLFIAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH GAGVWSVDAMRLAKKGA CCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]