| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is glnH [H]
Identifier: 91786595
GI number: 91786595
Start: 704732
End: 705565
Strand: Direct
Name: glnH [H]
Synonym: Bpro_0691
Alternate gene names: 91786595
Gene position: 704732-705565 (Clockwise)
Preceding gene: 91786588
Following gene: 91786596
Centisome position: 13.55
GC content: 62.95
Gene sequence:
>834_bases ATGAAGCAAATCAGAAACATGGCCCGTCGCACCCTTCTGGTCGCCGGATCTCTCGCGCTCGGCTCGACCCTGCTGGGCCT GCCGGCATCAGCGTCGGCGCGAACGCTCGACGAGATCGTGGCGAGCAAGAAAATCGTCATCGGCGTCAACCCCACGCTGC CGCCGCTGGGCATCTTCAACGACAAGAACGAGATCGATGGCTTCGATGTCGACGTCGCCCGCAAGCTCGGTGAACTGCTG GGCGTGAAGACCGAGATCGTCCAGGTCGGCTCGCCCGACCGAATTCCCTTCGTCAGCAGCGGCAAGATCGATGCCGTGCT GGGCGCCATGACCATCACCGCCGAGCGGCAGAAGGTCATCGACTTCACCGTGCCGCTGCACACCGAGGTGCTGGGCGTGC TGACCACCAAGGCCAAGCCATACAAGGACTGGATGGAGCTCAACGACACCGCGGTCAGGCTGGTGGAGGTACGAGGTTCC ACCCCTGTGAAACTGGCGCAGGAAAAGCTGCCCAAAGCGCAGTTGCTGCTGCTGGACAATTACCCCGATGCCGTGCGCGC CATAGCTCAGGGCCGCGCCGACGCGATGATCGACGTGATGGACTTCATGACCGAGCACACCGCCAAGCACAAGGTCGACT GGCGCATCGTGGACGCGCCTATCGATGTCTATTTCTGCGCCGTCGGCGTGCAGAAGGGCAACGACGCGCTGCGCGAAAAG CTCAGCGGCGCCATCAAGGAACTGCACCGCAACGGCTACGTGGACGAGCGCTGGAAGAAGTGGTTCGGTGGCCCGATGCT GCATGACCCGCGCACCGCACCGACCTACAAGTAA
Upstream 100 bases:
>100_bases GATGCCACCTGAACTGGCACTCGTCTTGCGTTCGTTTCCGTAGCATGCGAGCCGCAACCGCGGTTCGAGCCCAACCTTCA ACCTCTAGGAGCTCTTTTCG
Downstream 100 bases:
>100_bases GCGTCGCACAGAATGAATCCGCGCCGCGCGCAGCCTGCGCGCGGCGCCGGTTTTCGAGCCAGACCCCATGCAATTCGACT ACACACCGGTTCTCGAGCGA
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKQIRNMARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFNDKNEIDGFDVDVARKLGELL GVKTEIVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKVIDFTVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGS TPVKLAQEKLPKAQLLLLDNYPDAVRAIAQGRADAMIDVMDFMTEHTAKHKVDWRIVDAPIDVYFCAVGVQKGNDALREK LSGAIKELHRNGYVDERWKKWFGGPMLHDPRTAPTYK
Sequences:
>Translated_277_residues MKQIRNMARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFNDKNEIDGFDVDVARKLGELL GVKTEIVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKVIDFTVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGS TPVKLAQEKLPKAQLLLLDNYPDAVRAIAQGRADAMIDVMDFMTEHTAKHKVDWRIVDAPIDVYFCAVGVQKGNDALREK LSGAIKELHRNGYVDERWKKWFGGPMLHDPRTAPTYK >Mature_277_residues MKQIRNMARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFNDKNEIDGFDVDVARKLGELL GVKTEIVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKVIDFTVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGS TPVKLAQEKLPKAQLLLLDNYPDAVRAIAQGRADAMIDVMDFMTEHTAKHKVDWRIVDAPIDVYFCAVGVQKGNDALREK LSGAIKELHRNGYVDERWKKWFGGPMLHDPRTAPTYK
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=226, Percent_Identity=27.8761061946903, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1787031, Length=243, Percent_Identity=27.9835390946502, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786876, Length=247, Percent_Identity=25.1012145748988, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787088, Length=228, Percent_Identity=23.6842105263158, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=25.3275109170306, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=21.5094339622642, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30476; Mature: 30476
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIRNMARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFN CHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCC DKNEIDGFDVDVARKLGELLGVKTEIVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKVI CCCCCCCCCHHHHHHHHHHHCCHHHEEECCCCCCCCEECCCCHHHHHHHHEEECCCCEEE DFTVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGSTPVKLAQEKLPKAQLLLLDN EEECCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCEEEEEECC YPDAVRAIAQGRADAMIDVMDFMTEHTAKHKVDWRIVDAPIDVYFCAVGVQKGNDALREK CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCHHHHHH LSGAIKELHRNGYVDERWKKWFGGPMLHDPRTAPTYK HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKQIRNMARRTLLVAGSLALGSTLLGLPASASARTLDEIVASKKIVIGVNPTLPPLGIFN CHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCC DKNEIDGFDVDVARKLGELLGVKTEIVQVGSPDRIPFVSSGKIDAVLGAMTITAERQKVI CCCCCCCCCHHHHHHHHHHHCCHHHEEECCCCCCCCEECCCCHHHHHHHHEEECCCCEEE DFTVPLHTEVLGVLTTKAKPYKDWMELNDTAVRLVEVRGSTPVKLAQEKLPKAQLLLLDN EEECCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCEEEEEECC YPDAVRAIAQGRADAMIDVMDFMTEHTAKHKVDWRIVDAPIDVYFCAVGVQKGNDALREK CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCHHHHHH LSGAIKELHRNGYVDERWKKWFGGPMLHDPRTAPTYK HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]