| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786498
Identifier: 91786498
GI number: 91786498
Start: 596205
End: 596690
Strand: Reverse
Name: 91786498
Synonym: Bpro_0592
Alternate gene names: NA
Gene position: 596690-596205 (Counterclockwise)
Preceding gene: 91786499
Following gene: 91786497
Centisome position: 11.47
GC content: 63.37
Gene sequence:
>486_bases ATGGACATGGAAGCACGAGGCCACAGCGAACACCCCGAAGCCCTGCGGCTCTGGCTGCGCCTGCTGACCTGCACCCAGCT GGTGGAAAAACAGGTGCGCACCCAGTTGCGCGAGCAGTTCGACACGACGCTCCCGAGATTTGACCTGATGGCCCAACTGG AGCGCAGCCCCGAGGGCCTGAAGATGAACGAGCTGTCGCGCCGCATGATGGTGACCGGCGGCAACGTCACCGGCATCACC GACCAGCTGGTCACCGAAGGGCTGGTGGAACGTGTGGACGTAGAAGGCGACCGCCGTGCCTACCGCGTGCGCCTGACGCC GCGCGGGCGCAAGCTGTTTGACGAGATGGCGCGCCAGCACGAGGCCTGGATTGTGGCGGCCTTTGAAAGCCTGTCGCCGC GTGAAGTCGAATCGCTCCACAAGCTGCTGGGAAAGGTCAAGCACCACCATATGCAGCAGAACGAAACCAAACTGGAAACC GCATGA
Upstream 100 bases:
>100_bases AGCTGTACCGTGAAATTTCAAAACAACAAGCGCTTGCGGCCCAGTCATGACCAAGGCAGGCAGCCTTCAGGAAAACAGCA GAACAAAAAGGAGCAGCTCT
Downstream 100 bases:
>100_bases AACACTACATAGTCCCCGCCAACCCCATGCACGCGCAGTTCGATGCGCTGGCCACTTACCACGCCCGGCACTTTGCCTAC GCCTTCGACGCCGGCGTGGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Transcriptional Regulator TrmB; MarR Family Regulatory Helix-Turn-Helix; Regulatory Protein; Regulatory Protein MarR; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MDMEARGHSEHPEALRLWLRLLTCTQLVEKQVRTQLREQFDTTLPRFDLMAQLERSPEGLKMNELSRRMMVTGGNVTGIT DQLVTEGLVERVDVEGDRRAYRVRLTPRGRKLFDEMARQHEAWIVAAFESLSPREVESLHKLLGKVKHHHMQQNETKLET A
Sequences:
>Translated_161_residues MDMEARGHSEHPEALRLWLRLLTCTQLVEKQVRTQLREQFDTTLPRFDLMAQLERSPEGLKMNELSRRMMVTGGNVTGIT DQLVTEGLVERVDVEGDRRAYRVRLTPRGRKLFDEMARQHEAWIVAAFESLSPREVESLHKLLGKVKHHHMQQNETKLET A >Mature_161_residues MDMEARGHSEHPEALRLWLRLLTCTQLVEKQVRTQLREQFDTTLPRFDLMAQLERSPEGLKMNELSRRMMVTGGNVTGIT DQLVTEGLVERVDVEGDRRAYRVRLTPRGRKLFDEMARQHEAWIVAAFESLSPREVESLHKLLGKVKHHHMQQNETKLET A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18756; Mature: 18756
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMEARGHSEHPEALRLWLRLLTCTQLVEKQVRTQLREQFDTTLPRFDLMAQLERSPEGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC KMNELSRRMMVTGGNVTGITDQLVTEGLVERVDVEGDRRAYRVRLTPRGRKLFDEMARQH CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH EAWIVAAFESLSPREVESLHKLLGKVKHHHMQQNETKLETA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MDMEARGHSEHPEALRLWLRLLTCTQLVEKQVRTQLREQFDTTLPRFDLMAQLERSPEGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC KMNELSRRMMVTGGNVTGITDQLVTEGLVERVDVEGDRRAYRVRLTPRGRKLFDEMARQH CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH EAWIVAAFESLSPREVESLHKLLGKVKHHHMQQNETKLETA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA