| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is namA [H]
Identifier: 91786499
GI number: 91786499
Start: 596741
End: 599074
Strand: Reverse
Name: namA [H]
Synonym: Bpro_0593
Alternate gene names: 91786499
Gene position: 599074-596741 (Counterclockwise)
Preceding gene: 91786500
Following gene: 91786498
Centisome position: 11.52
GC content: 64.27
Gene sequence:
>2334_bases ATGCACATCCTTTGCCTTGGCGGCGGCCCCGCAGGTCTGTATTTCGCCCTGTTGATGAAGCTGCAGAACCCGGCACACCA GGTGACCGTGGTTGAACGCAACCGTCCCTTTGACACCTTTGGCTGGGGCGTGGTGCTGTCAGACCAGACGCTGGGCAATC TGCGGGTGGCCGACCCGGTCAGCGCGCAGCTGATTGGCGACGCCTTCAACCACTGGGATGATGTGGAGGTGTTCTTCAAG GGCCGCAGCGTGCGTTCGGGTGGCCATGGTTTTTGCGGCATCGGCCGCAAGCGCCTGCTCAATATCCTGCAAGAGCGCTG CCTGGCACTGGGTGTCGAACTGGTGTTTGAAACCGACGTGCAGGACGACCAGGCAATTGCCGCGCAGTACCAGGCTGACC TGGTGGTGGCCAGCGACGGGCTGAACAGCCGCATCCGCAACCGCTACGCGGAGACCTTCAAGCCCGATGTCGAGCTGCGC GCCTGCCGCTTTGTCTGGCTGGGTACGCGCAAGACCTTCGACGCCTTCACCTTCGCGTTCGAGAAAACCGAGCACGGCTG GTTTGCCGCGCACGCCTACAAGTTTGACGAGAACACCTCGACCTTCATCGTCGAAACCCCCGAAGCCGTCTGGAAGGCCC ATGGCCTGGACCAGATGAGCCAGGAGGAAGGCATCGCCTTTTGCGAGCGCCTGTTTGCCAAATACCTGGACGGCAATGCC CTGATGAACAATGCCACGCATGTGCGCGGCTCGGCGATCTGGATCCGCTTTCCGCGCGTGGTCTGCGAGCGCTGGGTGCA CCACGAAACCGTGGAGGGAAAGCGCGTGCCCATCGTGCTCATGGGCGACGCGGCCCACACCGCGCATTTCTCGATTGGCA GCGGCACCAAGCTGGCGCTCGAAGACGCGATCGACCTGGCGAATGAATTCAGCGCGAGCGCTGAGGAATTCAACACCGGC CACGGCATGGACGAGGTACTGCAGGCTTATGAGGCGCGGCGCTCCGTCGAGGTGCTGAAGATCCAGAACGCGGCGCGCAA CTCCACCGAGTGGTTCGAGAACGTCAACCGCTACAGCGGCATGGAGATCGAGCAGTTCGCCTATTCGCTGCTGACCCGCT CACAGCGCATCAGCCACGAAAACCTGCGGCTGCGCGATGCGAAATGGATCGAAAGCTATGAATCCTGGCTGTCGGGCGGC CCGGTGATTCCGCCGATGCTGACGCCGTTCAAGGTGCGCGGCACCGAGCTCAAGAACCGCATTGTGTGCTCGCCGATGGC AACCTACAGCGCCATTGACGGTGTGCCGCAAGACTTTCATCTGGTGCACCTGGGCGCGCGCGCGCTCGGCGGCGCCGCCA TGGTGATGGTGGAGATGACCAGCCCGAATCCCGAGGGCCGCATCACACCGGCCTGCACCGGGCTGTGGAACGACGAGCAA ACAGCCGCCTTCAAGCGGATTGTGGATTTCGTGCACGGCCAGAGCACGGCCAAAATCGGCATGCAGCTCGGCCACAGCGG CCCCAAGGGCTCGACCCAGGTGGGCTGGGAAGAGATGGATGAACCGCTGCCCGCAGGGGGCGCGCATGCCAACTGGCCGG TGGTGTCGGCCAGCGCCGTGCCCTATGGCGAGCGCAACCAGACGCCACAGGCCATGACGCACAGCCACATGGAAACGCTC AAGCAGCAGTTTGTGGACGCCACCCGGCGCGCCGCCGCCGCCGGCTTCGACTGGCTGGAACTGCACTGCGCGCACGGCTA CCTGCTGTCGGCCTTCATCACGCCGCTGACCAATCTGCGCAGCGACGAGTACGGCGGCAACATCGAGAACCGCTGCCGCT ACCCGCTGGAGGTGTTTCGCGCCATGCGCGCGGTCTGGCCCGCACACCTGCCCATGAGCGTGCGCATCTCCGCGCACGAC TGGGCGCCGGGCGGCAACACGCCCGACGACGCGATCGTGGTGGCCCGGTTGTTCAAGGACGCGGGCTGCGATGTGATCGA CGTGTCCTCGGGCCAAACCACGCGCCAGGCCAAACCGGTGTATGGCCGCATGTACCAGACGCCGTTTGCCGACCGCATCC GCAATGAGGTCGGCATACAGACCATTGCGGTGGGTGCAATTTCCGAAGTCGACCATGTCAACAGCATCATTGCCGCCGGC CGTGCCGACCTGTGCGCGCTGGCCCGACCGCACCTGGCCGATCCGGCCTGGACGCTGCACGAAGCCGCCAAGCTGCAAAG CCAGGCCGTGGACTGGCCCAAACAGTACCTGAGCGGCCGGGATCAGCTGTACCGTGAAATTTCAAAACAACAAGCGCTTG CGGCCCAGTCATGA
Upstream 100 bases:
>100_bases TGGCCGGAAAGCCGCCATGGCCGGCCGGTAAAAAACCGCTTGACGAATTTACTTTAAACCTAAACAATTAAGGTCAGATT AATCGAACGAGCACACATTC
Downstream 100 bases:
>100_bases CCAAGGCAGGCAGCCTTCAGGAAAACAGCAGAACAAAAAGGAGCAGCTCTATGGACATGGAAGCACGAGGCCACAGCGAA CACCCCGAAGCCCTGCGGCT
Product: salicylyl-CoA 5-hydroxylase
Products: NA
Alternate protein names: Xenobiotic reductase [H]
Number of amino acids: Translated: 777; Mature: 777
Protein sequence:
>777_residues MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPVSAQLIGDAFNHWDDVEVFFK GRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDVQDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELR ACRFVWLGTRKTFDAFTFAFEKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLALEDAIDLANEFSASAEEFNTG HGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSGMEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGG PVIPPMLTPFKVRGTELKNRIVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAVPYGERNQTPQAMTHSHMETL KQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLRSDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHD WAPGGNTPDDAIVVARLFKDAGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS
Sequences:
>Translated_777_residues MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPVSAQLIGDAFNHWDDVEVFFK GRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDVQDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELR ACRFVWLGTRKTFDAFTFAFEKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLALEDAIDLANEFSASAEEFNTG HGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSGMEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGG PVIPPMLTPFKVRGTELKNRIVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAVPYGERNQTPQAMTHSHMETL KQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLRSDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHD WAPGGNTPDDAIVVARLFKDAGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS >Mature_777_residues MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPVSAQLIGDAFNHWDDVEVFFK GRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDVQDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELR ACRFVWLGTRKTFDAFTFAFEKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLALEDAIDLANEFSASAEEFNTG HGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSGMEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGG PVIPPMLTPFKVRGTELKNRIVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAVPYGERNQTPQAMTHSHMETL KQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLRSDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHD WAPGGNTPDDAIVVARLFKDAGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS
Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=361, Percent_Identity=27.1468144044321, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1789463, Length=337, Percent_Identity=24.3323442136499, Blast_Score=99, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17559802, Length=280, Percent_Identity=31.7857142857143, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17565138, Length=213, Percent_Identity=32.8638497652582, Blast_Score=101, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17564188, Length=271, Percent_Identity=28.7822878228782, Blast_Score=99, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17559804, Length=278, Percent_Identity=26.6187050359712, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI72001454, Length=273, Percent_Identity=27.4725274725275, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17540738, Length=270, Percent_Identity=27.4074074074074, Blast_Score=93, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17566914, Length=128, Percent_Identity=33.59375, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6325086, Length=230, Percent_Identity=29.5652173913043, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321973, Length=226, Percent_Identity=27.8761061946903, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: =1.6.99.1 [H]
Molecular weight: Translated: 86192; Mature: 86192
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00383 TYR_PHOSPHATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPV CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCH SAQLIGDAFNHWDDVEVFFKGRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDV HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEECCC QDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELRACRFVWLGTRKTFDAFTFAF CCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHEEE EKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA ECCCCCEEEEEEEEECCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLAL HCCCCCEECCCEEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEHH EDAIDLANEFSASAEEFNTGHGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSG HHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCEEEEEEHHHCCCHHHHHHHHHHHCC MEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGGPVIPPMLTPFKVRGTELKNR CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCE IVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ EEECCHHHHHHHCCCCCCEEEEEECHHHCCCEEEEEEEEECCCCCCCCCHHCCCCCCCHH TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAV HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCC PYGERNQTPQAMTHSHMETLKQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHCC SDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHDWAPGGNTPDDAIVVARLFKD CCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH AGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG CCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCC RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS CHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHILCLGGGPAGLYFALLMKLQNPAHQVTVVERNRPFDTFGWGVVLSDQTLGNLRVADPV CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCH SAQLIGDAFNHWDDVEVFFKGRSVRSGGHGFCGIGRKRLLNILQERCLALGVELVFETDV HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEECCC QDDQAIAAQYQADLVVASDGLNSRIRNRYAETFKPDVELRACRFVWLGTRKTFDAFTFAF CCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHEEE EKTEHGWFAAHAYKFDENTSTFIVETPEAVWKAHGLDQMSQEEGIAFCERLFAKYLDGNA ECCCCCEEEEEEEEECCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH LMNNATHVRGSAIWIRFPRVVCERWVHHETVEGKRVPIVLMGDAAHTAHFSIGSGTKLAL HCCCCCEECCCEEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCCCEEHH EDAIDLANEFSASAEEFNTGHGMDEVLQAYEARRSVEVLKIQNAARNSTEWFENVNRYSG HHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCEEEEEEHHHCCCHHHHHHHHHHHCC MEIEQFAYSLLTRSQRISHENLRLRDAKWIESYESWLSGGPVIPPMLTPFKVRGTELKNR CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCE IVCSPMATYSAIDGVPQDFHLVHLGARALGGAAMVMVEMTSPNPEGRITPACTGLWNDEQ EEECCHHHHHHHCCCCCCEEEEEECHHHCCCEEEEEEEEECCCCCCCCCHHCCCCCCCHH TAAFKRIVDFVHGQSTAKIGMQLGHSGPKGSTQVGWEEMDEPLPAGGAHANWPVVSASAV HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCC PYGERNQTPQAMTHSHMETLKQQFVDATRRAAAAGFDWLELHCAHGYLLSAFITPLTNLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHCC SDEYGGNIENRCRYPLEVFRAMRAVWPAHLPMSVRISAHDWAPGGNTPDDAIVVARLFKD CCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH AGCDVIDVSSGQTTRQAKPVYGRMYQTPFADRIRNEVGIQTIAVGAISEVDHVNSIIAAG CCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCC RADLCALARPHLADPAWTLHEAAKLQSQAVDWPKQYLSGRDQLYREISKQQALAAQS CHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA