Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786463

Identifier: 91786463

GI number: 91786463

Start: 556162

End: 556812

Strand: Direct

Name: 91786463

Synonym: Bpro_0557

Alternate gene names: NA

Gene position: 556162-556812 (Clockwise)

Preceding gene: 91786462

Following gene: 91786464

Centisome position: 10.69

GC content: 62.67

Gene sequence:

>651_bases
ATGAGCGGGAGTACCATTCTCAACCGGGGCCGGCCGGCCCCGGCACCTCAAATAAAGGCGGTCGACATGAAAGACCATAT
CGAACGGGTACTGGCCGCAGTGTTCGGCGGCATTTTCCTGCTGCTGGCCTGCGTGGTGGCCGTCGAGACCATCTCCCGCA
AGGTGTTCAACGTGTCGCTGCAGGGTGCTGACGAGCTGGGCGGCTATGCCCTGGCCGTGGGCTCGACCATCGCCTTCAGC
CTGGCACTGATGGGGCGCAATCACATTCGGGTGGATGTGTTCCATGAGCGCTTTCCCCGCGCCATGCAGGCCTTCCTGAA
CTGGTTCTCCATCGTCACGCTGGCCTCCTTTGGCACGTTCGTGGCCTGGATTGCAACCAAGGTCATCACCGACACCCTGC
AGTACGGCAGCACGGCGCAGACACCCTGGGCCACGCCGCTGATCTGGCCGCAGGCGGTCTGGTACGCCGGCCTGGTGATT
TTCGCCATGGTGTCTATCGGCTACGCGCTGCGCGCCAGCTGGCTGCTCCTGACAAAGCGTGTCGACACGCTGAACCATGA
CTTCCATCCGAAGAGCGCCAAGGAAGAGCTGAAGGAAGAGCTCGATGACCTGGCCCAGCGCCAGTCCACAGAACAGGGAG
CACAGCCATGA

Upstream 100 bases:

>100_bases
CCAAGGTTTCGCTGCCAACCTGGGCCGAAGTCTGTGATAAATCCAACCCGGGCTGCTCCCAGAAGTGGCACGCCCAGGTC
GCACCGGTGCTGGGTCTGAA

Downstream 100 bases:

>100_bases
GCATCGGACTGTTTGGAATTGCATTCGTCGTGATGCTTGGCATGATGCTGGTCGGCATTCCGATCGCCGTCTCGATGGCG
GCGGTGGGGATCGTGGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: TRAP-Type Transport System Small Permease Component; Trap Transporter Transmembrane Protein; TRAP Transporter-DctQ Subunit; TRAP Transporter DctQ-Like Membrane Protein

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSGSTILNRGRPAPAPQIKAVDMKDHIERVLAAVFGGIFLLLACVVAVETISRKVFNVSLQGADELGGYALAVGSTIAFS
LALMGRNHIRVDVFHERFPRAMQAFLNWFSIVTLASFGTFVAWIATKVITDTLQYGSTAQTPWATPLIWPQAVWYAGLVI
FAMVSIGYALRASWLLLTKRVDTLNHDFHPKSAKEELKEELDDLAQRQSTEQGAQP

Sequences:

>Translated_216_residues
MSGSTILNRGRPAPAPQIKAVDMKDHIERVLAAVFGGIFLLLACVVAVETISRKVFNVSLQGADELGGYALAVGSTIAFS
LALMGRNHIRVDVFHERFPRAMQAFLNWFSIVTLASFGTFVAWIATKVITDTLQYGSTAQTPWATPLIWPQAVWYAGLVI
FAMVSIGYALRASWLLLTKRVDTLNHDFHPKSAKEELKEELDDLAQRQSTEQGAQP
>Mature_215_residues
SGSTILNRGRPAPAPQIKAVDMKDHIERVLAAVFGGIFLLLACVVAVETISRKVFNVSLQGADELGGYALAVGSTIAFSL
ALMGRNHIRVDVFHERFPRAMQAFLNWFSIVTLASFGTFVAWIATKVITDTLQYGSTAQTPWATPLIWPQAVWYAGLVIF
AMVSIGYALRASWLLLTKRVDTLNHDFHPKSAKEELKEELDDLAQRQSTEQGAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23790; Mature: 23659

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSTILNRGRPAPAPQIKAVDMKDHIERVLAAVFGGIFLLLACVVAVETISRKVFNVSL
CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
QGADELGGYALAVGSTIAFSLALMGRNHIRVDVFHERFPRAMQAFLNWFSIVTLASFGTF
CCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAWIATKVITDTLQYGSTAQTPWATPLIWPQAVWYAGLVIFAMVSIGYALRASWLLLTKR
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDTLNHDFHPKSAKEELKEELDDLAQRQSTEQGAQP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGSTILNRGRPAPAPQIKAVDMKDHIERVLAAVFGGIFLLLACVVAVETISRKVFNVSL
CCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
QGADELGGYALAVGSTIAFSLALMGRNHIRVDVFHERFPRAMQAFLNWFSIVTLASFGTF
CCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAWIATKVITDTLQYGSTAQTPWATPLIWPQAVWYAGLVIFAMVSIGYALRASWLLLTKR
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDTLNHDFHPKSAKEELKEELDDLAQRQSTEQGAQP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA