Click here to switch to the map view.

The map label for this gene is yiaO [H]

Identifier: 91786459

GI number: 91786459

Start: 552207

End: 553217

Strand: Direct

Name: yiaO [H]

Synonym: Bpro_0553

Alternate gene names: 91786459

Gene position: 552207-553217 (Clockwise)

Preceding gene: 91786458

Following gene: 91786460

Centisome position: 10.62

GC content: 64.69

Gene sequence:

>1011_bases
ATGAACCAGCCCTCCCGACTGCCCCTGATCACCCGCCTGGCCGCCGCTGCGGCCCTGACGCTGGCCTCTGCCATGCTGCC
CGTCGCGGCACAGCAGAAGCTGCAGATTGCCGGCAACTTTGCCTCGGAGCACCCGAGCAGCGTGGCGGTCGAACAGGTGT
TCAAAAAAGAGGTTGCACGCCTGACCAACAACCAGCTGCAGGTCGATGTGTTTCCCGCCATGCAACTGGGCGGCGCCAAG
GAGAACGTCGACGCCGTGCGCTCCGGCACACTGGCGCTGACCTGGGTCGGCGCCGCCTTCCTGTCGCGCATCGCGCCTGA
ACTCGAGGCGGTCAGCCTGCCCTTCGTGTTCGCAAACCGGCAAAGCGCGTTTCGGGTGATTGACGGTCCGGTCGGCGATG
CCATCGACAGGAAGCTGGGCGACAAGGGCTTCATCTCGCTCGGCTGGATGGAGCTGGGCATGCGCAACGTCACCAACAGC
CGGGGGCCGATCAAAAGCATGGCCGACCTCAAGGGCCTGAAGATCCGCCTGCAGCCCAACGAGACCCACCTGGCCACGTT
CCGGGCGCTCGGCGCCAACCCGGTGGCGATGGACGTCAAGGAGCTGTACTCGGCACTCGAGCAGCGTGTGGTGGATGCGC
AGGAGAACCCGTACACCGTGATCTCGGCCGCGCGTTACAGCGAGGTGCAAAAACAGCTGTCCAACAGCGGGCATTTCTTT
GACCTCATTGCCGTGGTCGCGAGCAAAAAAGCCTTCGAGCAGCTCAAGCCCGAATACCAGAAGGCCATACGCGAAGCGAT
GACCGCCACCATTGCCTTTCAGCGCAAGCTGGCCGCCGAGGACGAGGCCAAGCGCCTGGCCGAACTGAAGGGCAAGATGA
CCTACACCGAAATCACGCCTGCCGCGCTGGAGGAAATGCGCCGCGCGACCGCCCCCGTCATCGAGGACGTGAAGAAGCGT
GCCGGCGCTGACCTGGTGAACCAAGTGCTGGCCGAAGCCGCCAGGCGCTGA

Upstream 100 bases:

>100_bases
ACCAAATCGCGGCCTGCCGCCCGCCATCGCCCGGCTGCTCGACCGGGCAAGCTGATTCTCTCCACCTATTTTGTCCTTCC
TCCACTCACGAAAGATCATC

Downstream 100 bases:

>100_bases
CCCGGCCGGCACGCAAGGAGACCGCTATGACAACGGAAACAATCGCGCTTGAACCGGTCGTGCCCGCAGGCTGGGCCGGG
CGCGCACTCGACGGGCTGAA

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: 2,3-DKG-binding protein; Extracytoplasmic solute receptor protein yiaO [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNQPSRLPLITRLAAAAALTLASAMLPVAAQQKLQIAGNFASEHPSSVAVEQVFKKEVARLTNNQLQVDVFPAMQLGGAK
ENVDAVRSGTLALTWVGAAFLSRIAPELEAVSLPFVFANRQSAFRVIDGPVGDAIDRKLGDKGFISLGWMELGMRNVTNS
RGPIKSMADLKGLKIRLQPNETHLATFRALGANPVAMDVKELYSALEQRVVDAQENPYTVISAARYSEVQKQLSNSGHFF
DLIAVVASKKAFEQLKPEYQKAIREAMTATIAFQRKLAAEDEAKRLAELKGKMTYTEITPAALEEMRRATAPVIEDVKKR
AGADLVNQVLAEAARR

Sequences:

>Translated_336_residues
MNQPSRLPLITRLAAAAALTLASAMLPVAAQQKLQIAGNFASEHPSSVAVEQVFKKEVARLTNNQLQVDVFPAMQLGGAK
ENVDAVRSGTLALTWVGAAFLSRIAPELEAVSLPFVFANRQSAFRVIDGPVGDAIDRKLGDKGFISLGWMELGMRNVTNS
RGPIKSMADLKGLKIRLQPNETHLATFRALGANPVAMDVKELYSALEQRVVDAQENPYTVISAARYSEVQKQLSNSGHFF
DLIAVVASKKAFEQLKPEYQKAIREAMTATIAFQRKLAAEDEAKRLAELKGKMTYTEITPAALEEMRRATAPVIEDVKKR
AGADLVNQVLAEAARR
>Mature_336_residues
MNQPSRLPLITRLAAAAALTLASAMLPVAAQQKLQIAGNFASEHPSSVAVEQVFKKEVARLTNNQLQVDVFPAMQLGGAK
ENVDAVRSGTLALTWVGAAFLSRIAPELEAVSLPFVFANRQSAFRVIDGPVGDAIDRKLGDKGFISLGWMELGMRNVTNS
RGPIKSMADLKGLKIRLQPNETHLATFRALGANPVAMDVKELYSALEQRVVDAQENPYTVISAARYSEVQKQLSNSGHFF
DLIAVVASKKAFEQLKPEYQKAIREAMTATIAFQRKLAAEDEAKRLAELKGKMTYTEITPAALEEMRRATAPVIEDVKKR
AGADLVNQVLAEAARR

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system yiaMNO involved in the uptake of 2,3- diketo-L-gulonate. This protein specifically binds 2,3-diketo-L- gulonate. Is not able to bind either L-ascorbate or dehydroascorbate [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=269, Percent_Identity=36.8029739776952, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36613; Mature: 36613

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPSRLPLITRLAAAAALTLASAMLPVAAQQKLQIAGNFASEHPSSVAVEQVFKKEVAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTNNQLQVDVFPAMQLGGAKENVDAVRSGTLALTWVGAAFLSRIAPELEAVSLPFVFANR
HHCCCEEEEEECHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEECCEEEECC
QSAFRVIDGPVGDAIDRKLGDKGFISLGWMELGMRNVTNSRGPIKSMADLKGLKIRLQPN
CCCEEEECCCCCHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCC
ETHLATFRALGANPVAMDVKELYSALEQRVVDAQENPYTVISAARYSEVQKQLSNSGHFF
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCHH
DLIAVVASKKAFEQLKPEYQKAIREAMTATIAFQRKLAAEDEAKRLAELKGKMTYTEITP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCH
AALEEMRRATAPVIEDVKKRAGADLVNQVLAEAARR
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQPSRLPLITRLAAAAALTLASAMLPVAAQQKLQIAGNFASEHPSSVAVEQVFKKEVAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LTNNQLQVDVFPAMQLGGAKENVDAVRSGTLALTWVGAAFLSRIAPELEAVSLPFVFANR
HHCCCEEEEEECHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEECCEEEECC
QSAFRVIDGPVGDAIDRKLGDKGFISLGWMELGMRNVTNSRGPIKSMADLKGLKIRLQPN
CCCEEEECCCCCHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCC
ETHLATFRALGANPVAMDVKELYSALEQRVVDAQENPYTVISAARYSEVQKQLSNSGHFF
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCHH
DLIAVVASKKAFEQLKPEYQKAIREAMTATIAFQRKLAAEDEAKRLAELKGKMTYTEITP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCH
AALEEMRRATAPVIEDVKKRAGADLVNQVLAEAARR
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]