| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hyuE [H]
Identifier: 91786458
GI number: 91786458
Start: 551415
End: 552161
Strand: Direct
Name: hyuE [H]
Synonym: Bpro_0552
Alternate gene names: 91786458
Gene position: 551415-552161 (Clockwise)
Preceding gene: 91786457
Following gene: 91786459
Centisome position: 10.6
GC content: 70.28
Gene sequence:
>747_bases ATGAAGCTGCTGCTGATCAACCCGAATATCTCGGAGAGCGTGTCGGAGCTGATCCGCAGCGAAGCGCAACGCAGCGCTTC GGCAGGCACCGAGATCAAGGTGCTGACCGCGCCCTTCGGCGTGGCCTATATAGAAACGCGCTTCGAGGCGCTGATCGGCG CCTACGCCGCAGCCCAGCTCGCGGCCGAGCATCACGCCCACTACGACGCTGTGGTGGTCGCGGCCTTCGGCGACCCGGGG CTGACGGGCTTGCGTGAAGCCCTGCCGGTGCCGGTGACCGGGCTGACCGAAGCCGCGTTGGCCAGTGCCTGCCTGCTCGG CAACCGCATCTCCATCATCGCCATCTCGCAGCGCATCCAGGCGTGGTACCGCGAGGTGGTGCAGTCCTATGGCCTGGGCT CCCGGCTGGCCAGCATCCGGGCGCTGGACCGGCCGCTGGCCAGCATAGGCCAGGTGCAGGGCGAGCACGCTCACGCGCTG AAGGCGCTGGCCGAACGCGCGGTCGATGAGGATGGGGCCGATGTCATTGTGCTGGCCGGCGCGCCGCTGGCGGGGCTGGC ACGAGCGCTCAAGGGCCAGCTGCCGGTGCCCGTGGTCGATGGCGTTTCCAGCGCGGTCCGCCACGCCGAAACCCTGGCCG CACTGCAACCGGGCACCGCCCAGCGCGGCAGTTTCGCGCCCCCGCCCGTCAAACCAAATCGCGGCCTGCCGCCCGCCATC GCCCGGCTGCTCGACCGGGCAAGCTGA
Upstream 100 bases:
>100_bases TGTGGGACGGCCGGGACTTCCATGGCCGGGCCGGTCGCGGCCAGTTCCTGGCCTGTGGCGCGCCCTCGCTGATGCCGTCG CGCCACGTCGGGAGGCCGGC
Downstream 100 bases:
>100_bases TTCTCTCCACCTATTTTGTCCTTCCTCCACTCACGAAAGATCATCATGAACCAGCCCTCCCGACTGCCCCTGATCACCCG CCTGGCCGCCGCTGCGGCCC
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKLLLINPNISESVSELIRSEAQRSASAGTEIKVLTAPFGVAYIETRFEALIGAYAAAQLAAEHHAHYDAVVVAAFGDPG LTGLREALPVPVTGLTEAALASACLLGNRISIIAISQRIQAWYREVVQSYGLGSRLASIRALDRPLASIGQVQGEHAHAL KALAERAVDEDGADVIVLAGAPLAGLARALKGQLPVPVVDGVSSAVRHAETLAALQPGTAQRGSFAPPPVKPNRGLPPAI ARLLDRAS
Sequences:
>Translated_248_residues MKLLLINPNISESVSELIRSEAQRSASAGTEIKVLTAPFGVAYIETRFEALIGAYAAAQLAAEHHAHYDAVVVAAFGDPG LTGLREALPVPVTGLTEAALASACLLGNRISIIAISQRIQAWYREVVQSYGLGSRLASIRALDRPLASIGQVQGEHAHAL KALAERAVDEDGADVIVLAGAPLAGLARALKGQLPVPVVDGVSSAVRHAETLAALQPGTAQRGSFAPPPVKPNRGLPPAI ARLLDRAS >Mature_248_residues MKLLLINPNISESVSELIRSEAQRSASAGTEIKVLTAPFGVAYIETRFEALIGAYAAAQLAAEHHAHYDAVVVAAFGDPG LTGLREALPVPVTGLTEAALASACLLGNRISIIAISQRIQAWYREVVQSYGLGSRLASIRALDRPLASIGQVQGEHAHAL KALAERAVDEDGADVIVLAGAPLAGLARALKGQLPVPVVDGVSSAVRHAETLAALQPGTAQRGSFAPPPVKPNRGLPPAI ARLLDRAS
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 25757; Mature: 25757
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLINPNISESVSELIRSEAQRSASAGTEIKVLTAPFGVAYIETRFEALIGAYAAAQL CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AAEHHAHYDAVVVAAFGDPGLTGLREALPVPVTGLTEAALASACLLGNRISIIAISQRIQ HHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHH AWYREVVQSYGLGSRLASIRALDRPLASIGQVQGEHAHALKALAERAVDEDGADVIVLAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECC APLAGLARALKGQLPVPVVDGVSSAVRHAETLAALQPGTAQRGSFAPPPVKPNRGLPPAI CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH ARLLDRAS HHHHHCCC >Mature Secondary Structure MKLLLINPNISESVSELIRSEAQRSASAGTEIKVLTAPFGVAYIETRFEALIGAYAAAQL CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AAEHHAHYDAVVVAAFGDPGLTGLREALPVPVTGLTEAALASACLLGNRISIIAISQRIQ HHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHH AWYREVVQSYGLGSRLASIRALDRPLASIGQVQGEHAHALKALAERAVDEDGADVIVLAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECC APLAGLARALKGQLPVPVVDGVSSAVRHAETLAALQPGTAQRGSFAPPPVKPNRGLPPAI CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH ARLLDRAS HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]