Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is sgaA [H]

Identifier: 91786454

GI number: 91786454

Start: 546707

End: 547918

Strand: Reverse

Name: sgaA [H]

Synonym: Bpro_0548

Alternate gene names: 91786454

Gene position: 547918-546707 (Counterclockwise)

Preceding gene: 91786455

Following gene: 91786451

Centisome position: 10.54

GC content: 64.85

Gene sequence:

>1212_bases
ATGAACCTGAATTTCCATCCCGCCGGACGCCATTTCCTGCAAATCCCCGGACCCAGCCCGGTGCCGGATCGCCTGCTGCG
CGCCATGAGCTACCCCACCATCGACCACCGCGGACCCGAATTCGGCGCCCTCGGGCGCAAGGTGCTCTCCGGCATCAAGG
ACATCTTCAAGACGCGCCACCCCGTGGTCATCTATCCCGCCTCCGGCACCGGCGCGTGGGAGGCTGCACTGGTGAATACG
CTGAGCCCGGGAGATGCCGTTCTCATGTTCGAGACCGGCCACTTCGCCAGTCTCTGGAACAAGATGGCGCTGCGGCTGGG
CCTGAAGCCGGAATTCATCGGCCTGCCGGGCACCGAGGGCTGGCGAAACGGCGTGCAGGCCGACATGATCGAGCAACGGC
TTCGCAACGACGCGCAGCATCAAATCAAGGCTGTTTGCGTGGTCCACAACGAGACCTCCACCGGCGTCACCTCCAACATC
GCGGCCGTGCGCCGCGCCATCGATGCGGCCAAGCATCCCGCCCTGCTGCTGGTCGACACCATTTCTGGCCTGGCCTCAGC
CGACTACCGCCATGACGAATGGGGTGTCGATGTCACCATCAGCGGCTCGCAAAAGGGTCTGATGCTGCCGCCGGGCATCA
GCTTTAACGCGCTGTCGCCCAAAGCCGTTGCCGCCAGCCGCGATGCCCTGCTGCCCAAGTCCTTCTGGGCCTGGGACGAG
ATTGTTGAAATGAATCAGACGGGCTACTGGCCCTACACGCCGAATACCAACCTGCTGTATGCCCTGAGCGAGGCGCTGGA
CATGATTTCGGCCGAGGGACTGCCCCAGGTTTTTGCCCGCCACGAACGCCTGGGCAAGGCCTGCCGCAATGCCGTAGAGG
CCTGGGGGCTGGAAATCCAGTGCGCCGATCCGGCGGTCTACTCCCCGGTGCTGACGGGCGTGATGATGCCCGAGGGTGTG
GATGCCGACCGGGTACGGCAAATCGTTTACCAGCACTTCAACATGTCGCTGGGCGCGGGGCTCGGCAAGGTGAAGGGCCG
CATGTTCCGCATCGGCCATCTCGGCGAATGCAATGACCTCACCCTGCTGGCCGCGCTTGCGGGCTGTGAGATGGGCCTGA
AACTCGCAGGCGTGCGTCTGCGCGAGAGCGGCACCTCGGCGGCCATGGAGTTTCTGGCAGCCTCGGCGCAGCCCACAGCG
ACACTGGGCTAG

Upstream 100 bases:

>100_bases
AAAAGTTCAGACTACTTCAGCCAACAAGCCCATTCTCTTATAGCTTCAAGGCTCGTACAGTCTCAATAAATTGTATGCAA
TTTATTGAAGGAGAACCCTG

Downstream 100 bases:

>100_bases
CTCCGCAGAAAAACGTGCATCTCGGCCGCAATCTCTTCAACGTGCGTCTCCAGCGCGAAATGGCTGGCGTCGAGGAGCTT
GACAACGGCGTTGGGGTTGT

Product: Serine--glyoxylate transaminase

Products: NA

Alternate protein names: SGAT [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRHPVVIYPASGTGAWEAALVNT
LSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEGWRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNI
AAVRRAIDAAKHPALLLVDTISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE
IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQCADPAVYSPVLTGVMMPEGV
DADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDLTLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTA
TLG

Sequences:

>Translated_403_residues
MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRHPVVIYPASGTGAWEAALVNT
LSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEGWRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNI
AAVRRAIDAAKHPALLLVDTISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE
IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQCADPAVYSPVLTGVMMPEGV
DADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDLTLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTA
TLG
>Mature_403_residues
MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRHPVVIYPASGTGAWEAALVNT
LSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEGWRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNI
AAVRRAIDAAKHPALLLVDTISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE
IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQCADPAVYSPVLTGVMMPEGV
DADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDLTLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTA
TLG

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=358, Percent_Identity=31.5642458100559, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17536281, Length=353, Percent_Identity=29.7450424929178, Blast_Score=131, Evalue=7e-31,
Organism=Saccharomyces cerevisiae, GI6321079, Length=389, Percent_Identity=26.4781491002571, Blast_Score=108, Evalue=1e-24,
Organism=Drosophila melanogaster, GI17530823, Length=352, Percent_Identity=30.1136363636364, Blast_Score=141, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR020578
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.6.1.45 [H]

Molecular weight: Translated: 43542; Mature: 43542

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRH
CCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PVVIYPASGTGAWEAALVNTLSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEG
CEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCHH
WRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNIAAVRRAIDAAKHPALLLVDT
HHCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEH
ISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE
HHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH
IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQ
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
CADPAVYSPVLTGVMMPEGVDADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDL
ECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHCCEEEEECCCCCCCCH
TLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTATLG
HHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNLNFHPAGRHFLQIPGPSPVPDRLLRAMSYPTIDHRGPEFGALGRKVLSGIKDIFKTRH
CCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PVVIYPASGTGAWEAALVNTLSPGDAVLMFETGHFASLWNKMALRLGLKPEFIGLPGTEG
CEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCHH
WRNGVQADMIEQRLRNDAQHQIKAVCVVHNETSTGVTSNIAAVRRAIDAAKHPALLLVDT
HHCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEH
ISGLASADYRHDEWGVDVTISGSQKGLMLPPGISFNALSPKAVAASRDALLPKSFWAWDE
HHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH
IVEMNQTGYWPYTPNTNLLYALSEALDMISAEGLPQVFARHERLGKACRNAVEAWGLEIQ
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
CADPAVYSPVLTGVMMPEGVDADRVRQIVYQHFNMSLGAGLGKVKGRMFRIGHLGECNDL
ECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHCCEEEEECCCCCCCCH
TLLAALAGCEMGLKLAGVRLRESGTSAAMEFLAASAQPTATLG
HHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144463 [H]