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The map label for this gene is dppB [H]

Identifier: 91786335

GI number: 91786335

Start: 439075

End: 440049

Strand: Reverse

Name: dppB [H]

Synonym: Bpro_0425

Alternate gene names: 91786335

Gene position: 440049-439075 (Counterclockwise)

Preceding gene: 91786336

Following gene: 91786334

Centisome position: 8.46

GC content: 68.0

Gene sequence:

>975_bases
ATGAAGCGCACGCAGTTCATGCTGACCCGCGTGCTGCAGGGTCTGGTGGCGATCCTGCTGATCGCCACCGTCAACTTCAT
GCTGGTGCGTGCCGCGCCGGGCGACCCGGTCTCGGTGCTGGCCGGGGAGGCCGGCGCGTCAGACCCGCAGTTCGTTGCCC
AGCTGCGTGCGCAGTTCGGGCTGGACCAGCCGATCACGACCCAGCTCGCCACCTACATCGGCAAGGTGGTGCGGCTGGAC
CTCGGCTTCTCGTACCGCCAGCAGCAGCCCGTGCTCAAGCTGATCATGGACCGGCTGCCTGCGACGCTGCTGCTCACGGG
CAGCGCGTTCGCGCTGTCGCTGCTTTTCGGGATCACGCTCGGCGCGCTCTCGGCACGACGGGCGGGCACCTGGGTCGACA
GTTCCATCACCGTGGTGGCGCTCATCTTCTATGCCACGCCGCTCTACTGGCTCGCGCTGATGGCGGTGCTGGTGTTCACG
GTGCAGCTCGACTGGCTGCCGGGCTTCGGCTTCAGCACGGTGGGCTCCGGCGCGACCGGGCTGGCACTGGCCTGGGACGT
GGCGCAGCACCTGCTGATGCCGGCACTTACGCTGGCGCTGTTCTACATGGCCGTGTATGCGCGCATGACGCGTGCGGCCA
TGCTCGACGTGGCGCAGATGGACTTCATCAAGACGGCGCGCGCCAAGGGTGTGCGGCCCGGCCGCATCCTGCGCGCGCAC
GTGCTGCGCAACGCCTTGCTGCCGGTGGTCACGCTGGCGGGCATCCAGGCCGGCGGGATGATAGGCGGCGCGGTGCTGAC
CGAGACGGTATTCGCCTGGCCCGGCATCGGCCGCCTGATGTTCGACGCCCTGCTGCAGCGCGACTACAGCCTGCTGCTTG
GCGCCTTCCTGGTCACCGCGGCCATGGCGGTGCTGTTCAACCTGATCACCGACCTCGTCTACACGCTGGTCGATCCGAGA
ATCGAATTGACATGA

Upstream 100 bases:

>100_bases
AGCAACATCGTGAGCTCGGCCATCGGCCTGAACGACAGCCTGAGCACCGCGTCCATCGCATGATGGCGTGCTCGGACCGG
CGCAGCGACGGGGGCTGCAA

Downstream 100 bases:

>100_bases
TGAAAAGTCCTTTTTGGCAACGCTTCTGCCGCAACAAGGGTGCCGTGATCGGCATGGCCGTGCTGCTGCTGGTGGCCGTC
GTTGCGCTCATCGGCCCGTC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKRTQFMLTRVLQGLVAILLIATVNFMLVRAAPGDPVSVLAGEAGASDPQFVAQLRAQFGLDQPITTQLATYIGKVVRLD
LGFSYRQQQPVLKLIMDRLPATLLLTGSAFALSLLFGITLGALSARRAGTWVDSSITVVALIFYATPLYWLALMAVLVFT
VQLDWLPGFGFSTVGSGATGLALAWDVAQHLLMPALTLALFYMAVYARMTRAAMLDVAQMDFIKTARAKGVRPGRILRAH
VLRNALLPVVTLAGIQAGGMIGGAVLTETVFAWPGIGRLMFDALLQRDYSLLLGAFLVTAAMAVLFNLITDLVYTLVDPR
IELT

Sequences:

>Translated_324_residues
MKRTQFMLTRVLQGLVAILLIATVNFMLVRAAPGDPVSVLAGEAGASDPQFVAQLRAQFGLDQPITTQLATYIGKVVRLD
LGFSYRQQQPVLKLIMDRLPATLLLTGSAFALSLLFGITLGALSARRAGTWVDSSITVVALIFYATPLYWLALMAVLVFT
VQLDWLPGFGFSTVGSGATGLALAWDVAQHLLMPALTLALFYMAVYARMTRAAMLDVAQMDFIKTARAKGVRPGRILRAH
VLRNALLPVVTLAGIQAGGMIGGAVLTETVFAWPGIGRLMFDALLQRDYSLLLGAFLVTAAMAVLFNLITDLVYTLVDPR
IELT
>Mature_324_residues
MKRTQFMLTRVLQGLVAILLIATVNFMLVRAAPGDPVSVLAGEAGASDPQFVAQLRAQFGLDQPITTQLATYIGKVVRLD
LGFSYRQQQPVLKLIMDRLPATLLLTGSAFALSLLFGITLGALSARRAGTWVDSSITVVALIFYATPLYWLALMAVLVFT
VQLDWLPGFGFSTVGSGATGLALAWDVAQHLLMPALTLALFYMAVYARMTRAAMLDVAQMDFIKTARAKGVRPGRILRAH
VLRNALLPVVTLAGIQAGGMIGGAVLTETVFAWPGIGRLMFDALLQRDYSLLLGAFLVTAAMAVLFNLITDLVYTLVDPR
IELT

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=335, Percent_Identity=39.1044776119403, Blast_Score=223, Evalue=9e-60,
Organism=Escherichia coli, GI1789888, Length=319, Percent_Identity=35.7366771159875, Blast_Score=204, Evalue=5e-54,
Organism=Escherichia coli, GI1787053, Length=319, Percent_Identity=36.6771159874608, Blast_Score=201, Evalue=4e-53,
Organism=Escherichia coli, GI1787497, Length=319, Percent_Identity=33.5423197492163, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=38.2911392405063, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=30.188679245283, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=28.5714285714286, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34975; Mature: 34975

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTQFMLTRVLQGLVAILLIATVNFMLVRAAPGDPVSVLAGEAGASDPQFVAQLRAQFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHEECCCCCCCHHHHHHHHHHHC
LDQPITTQLATYIGKVVRLDLGFSYRQQQPVLKLIMDRLPATLLLTGSAFALSLLFGITL
CCCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHEEECCHHHHHHHHHHHHH
GALSARRAGTWVDSSITVVALIFYATPLYWLALMAVLVFTVQLDWLPGFGFSTVGSGATG
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
LALAWDVAQHLLMPALTLALFYMAVYARMTRAAMLDVAQMDFIKTARAKGVRPGRILRAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VLRNALLPVVTLAGIQAGGMIGGAVLTETVFAWPGIGRLMFDALLQRDYSLLLGAFLVTA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMAVLFNLITDLVYTLVDPRIELT
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRTQFMLTRVLQGLVAILLIATVNFMLVRAAPGDPVSVLAGEAGASDPQFVAQLRAQFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHEECCCCCCCHHHHHHHHHHHC
LDQPITTQLATYIGKVVRLDLGFSYRQQQPVLKLIMDRLPATLLLTGSAFALSLLFGITL
CCCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHEEECCHHHHHHHHHHHHH
GALSARRAGTWVDSSITVVALIFYATPLYWLALMAVLVFTVQLDWLPGFGFSTVGSGATG
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
LALAWDVAQHLLMPALTLALFYMAVYARMTRAAMLDVAQMDFIKTARAKGVRPGRILRAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VLRNALLPVVTLAGIQAGGMIGGAVLTETVFAWPGIGRLMFDALLQRDYSLLLGAFLVTA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMAVLFNLITDLVYTLVDPRIELT
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]