| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786325
Identifier: 91786325
GI number: 91786325
Start: 428042
End: 429124
Strand: Reverse
Name: 91786325
Synonym: Bpro_0415
Alternate gene names: NA
Gene position: 429124-428042 (Counterclockwise)
Preceding gene: 91786326
Following gene: 91786324
Centisome position: 8.25
GC content: 70.73
Gene sequence:
>1083_bases ATGACGGTCGCCACCGCCACCTCCGTTTTCGCCGTCGATTTCGACGAATCCGAGGTCTTGAGCGAGACCTCCCCGCAACT CGACCCCGCATGGGTCCACGCCCTGGCGCTGCAGCACTACGGGATCGCCGGTGAGATGAAGGCGCTGACGGGCGAGCGCG ATCGCAACTACCTGCTGCAATCCGCGCAGAGTGGCGCGCGCTTCATGCTGAAGATCTCGCACCCCGCGGAAAAGGCGCTG GTGGCGGATTTCCAGACGCAGGCGCTGCTGCACATCGCCGCCACCGACGCCGGGCTGCCGGTGCAGCGCATCGTGCCGAC GCTCGGCGGCGAGCCGTCCTTCCTGTGCAATCCGGGCGACGGGCTGCCGCGCGTGGTGCGGCTCTTCAGCTACCTGCCGG GACTGCCCTTGCCGGACGCGCCGCACACGCTGGCGCAGCGGCAGAACCTGGCGCGCACCCTGGCCCGGCTCGACCTGGCG CTGCGCGACTTCGACCATCCGGCCGGGGCGCTAGCGCTGCCCTGGGACATCCAGCGCGCCGACAGCGTGCGCGGGCTGCT GGCGCACATCGCCGACCCTGGGCGCCGTGCCTTGGCACAGCGTGCGCTGGACCGCTTCGAGCGCGACGTCAAGCCGGTGC TGCCCGGCCTGCGCCGCCAGCCGATCCATAACGACTTCAACATCTACAACGTGCTGGTCGACCCGGCCGACACCGATCGC ATCGCCGCGATTCTCGATTTCGGCGACATGGTTCGCGCGCCGCTGATCGATGACCTCGCAGTGGCCGCGGCCTACCAGCT CGGTGCGAGCGACGACCCGCTGGCCGACATTGTCCCCTTCGTCGCGGCGTACCACGCGGTGCTGCCGCTGCTGCCGGCCG AGCTCGACCTGCTGTTCACGCTGATGACGGCCCGCCTCGTGATGGTGGTGGCCATCAGCGGCTGGCGTGCGGCGCGCCAC CCCGACAACGCGGCCTACCTGCTGCGCAACAACCCGCTCTCGTGGGCCCGCCTGCAGGCCTGCGAGCGTATCGGCCACAA CGCCGCGACGGACGCCCTGCGGCGCGCCTGCGGCCTGGACTGA
Upstream 100 bases:
>100_bases GCCTGGGCCTGCCGACCGTGCTGGTGCAGGAAGGGGGCTACCTGTCCGACGACCTCGGCCCCAATCTCGCCAGCGCACTG CGCGGCTTTGCGGGCGTGGC
Downstream 100 bases:
>100_bases GATCACCGACATGCCGCCCATTTCCCACACCACCCACACCACCCGGGACCTCATGGACCGCCGCGCGCGGCTGCTGGGCC CGGCCTATCGCCTGTTCTAC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Aminotransferase; Aminotransferase Protein; Aminotransferase Class III Family; Aminotransferase Class-III; Phosphotransferase; Homoserine Kinase; Class III Aminotransferase; Homoserine Kinase Type II; Aminotransferase Class-III Domain-Containing Protein; 4-Aminobutyrate Aminotransferase
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTVATATSVFAVDFDESEVLSETSPQLDPAWVHALALQHYGIAGEMKALTGERDRNYLLQSAQSGARFMLKISHPAEKAL VADFQTQALLHIAATDAGLPVQRIVPTLGGEPSFLCNPGDGLPRVVRLFSYLPGLPLPDAPHTLAQRQNLARTLARLDLA LRDFDHPAGALALPWDIQRADSVRGLLAHIADPGRRALAQRALDRFERDVKPVLPGLRRQPIHNDFNIYNVLVDPADTDR IAAILDFGDMVRAPLIDDLAVAAAYQLGASDDPLADIVPFVAAYHAVLPLLPAELDLLFTLMTARLVMVVAISGWRAARH PDNAAYLLRNNPLSWARLQACERIGHNAATDALRRACGLD
Sequences:
>Translated_360_residues MTVATATSVFAVDFDESEVLSETSPQLDPAWVHALALQHYGIAGEMKALTGERDRNYLLQSAQSGARFMLKISHPAEKAL VADFQTQALLHIAATDAGLPVQRIVPTLGGEPSFLCNPGDGLPRVVRLFSYLPGLPLPDAPHTLAQRQNLARTLARLDLA LRDFDHPAGALALPWDIQRADSVRGLLAHIADPGRRALAQRALDRFERDVKPVLPGLRRQPIHNDFNIYNVLVDPADTDR IAAILDFGDMVRAPLIDDLAVAAAYQLGASDDPLADIVPFVAAYHAVLPLLPAELDLLFTLMTARLVMVVAISGWRAARH PDNAAYLLRNNPLSWARLQACERIGHNAATDALRRACGLD >Mature_359_residues TVATATSVFAVDFDESEVLSETSPQLDPAWVHALALQHYGIAGEMKALTGERDRNYLLQSAQSGARFMLKISHPAEKALV ADFQTQALLHIAATDAGLPVQRIVPTLGGEPSFLCNPGDGLPRVVRLFSYLPGLPLPDAPHTLAQRQNLARTLARLDLAL RDFDHPAGALALPWDIQRADSVRGLLAHIADPGRRALAQRALDRFERDVKPVLPGLRRQPIHNDFNIYNVLVDPADTDRI AAILDFGDMVRAPLIDDLAVAAAYQLGASDDPLADIVPFVAAYHAVLPLLPAELDLLFTLMTARLVMVVAISGWRAARHP DNAAYLLRNNPLSWARLQACERIGHNAATDALRRACGLD
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI134288871, Length=358, Percent_Identity=22.6256983240223, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24585010, Length=340, Percent_Identity=30, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI24585008, Length=340, Percent_Identity=30, Blast_Score=132, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39182; Mature: 39051
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVATATSVFAVDFDESEVLSETSPQLDPAWVHALALQHYGIAGEMKALTGERDRNYLLQ CCCEEEEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHH SAQSGARFMLKISHPAEKALVADFQTQALLHIAATDAGLPVQRIVPTLGGEPSFLCNPGD HHCCCCEEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCEEECCCC GLPRVVRLFSYLPGLPLPDAPHTLAQRQNLARTLARLDLALRDFDHPAGALALPWDIQRA CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHH DSVRGLLAHIADPGRRALAQRALDRFERDVKPVLPGLRRQPIHNDFNIYNVLVDPADTDR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCCCCH IAAILDFGDMVRAPLIDDLAVAAAYQLGASDDPLADIVPFVAAYHAVLPLLPAELDLLFT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH LMTARLVMVVAISGWRAARHPDNAAYLLRNNPLSWARLQACERIGHNAATDALRRACGLD HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure TVATATSVFAVDFDESEVLSETSPQLDPAWVHALALQHYGIAGEMKALTGERDRNYLLQ CCEEEEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHH SAQSGARFMLKISHPAEKALVADFQTQALLHIAATDAGLPVQRIVPTLGGEPSFLCNPGD HHCCCCEEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCEEECCCC GLPRVVRLFSYLPGLPLPDAPHTLAQRQNLARTLARLDLALRDFDHPAGALALPWDIQRA CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHH DSVRGLLAHIADPGRRALAQRALDRFERDVKPVLPGLRRQPIHNDFNIYNVLVDPADTDR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCCCCH IAAILDFGDMVRAPLIDDLAVAAAYQLGASDDPLADIVPFVAAYHAVLPLLPAELDLLFT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH LMTARLVMVVAISGWRAARHPDNAAYLLRNNPLSWARLQACERIGHNAATDALRRACGLD HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA