The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ybeD [C]

Identifier: 91786227

GI number: 91786227

Start: 341239

End: 341562

Strand: Reverse

Name: ybeD [C]

Synonym: Bpro_0316

Alternate gene names: 91786227

Gene position: 341562-341239 (Counterclockwise)

Preceding gene: 91786228

Following gene: 91786226

Centisome position: 6.57

GC content: 62.35

Gene sequence:

>324_bases
ATGACGACTTCACCGAAAAACCCGCCGACAACCCCGCCGAACGCCGCGCCCGAACCCGCACCGCGTCAGGAGTCGCTGAT
CGACTACCCTTCGCTCTTCCCCATCAAGGTCATGGGCGAAAAAGTCGATGGGCTGGTGGCGGCAATCACCTCCGTGGCGC
ACCAGTTCGACCCCGTGTTTGACGCCACCACCATCGAGCTGCGCGAAAGCAAGGGCGGCAAATACCTGGGCGTCACCATC
ACGGTGACCGCCACCAGTCGCGAGCAGCTGGACGAGCTCTACCGCACACTGTCCACCCATCCGATGGTCAAGGTGGTTCT
GTAA

Upstream 100 bases:

>100_bases
TCACCCTGCTGGACGGTCAACCGGTTGGAAATGGCAAGCCCGGCCCCATCTATGCCAGCTTGTATGCTGCATACCAGCAG
GCCAAGCGAGAGCAATCAAC

Downstream 100 bases:

>100_bases
ATCGCATCAGTTTTACCGCTCAAAATTTCATAAGGAATAGCGCCACAATTCTTGTGAAAATAATTTGACACTTATTTTCA
CAAGATTATCATCATGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTTSPKNPPTTPPNAAPEPAPRQESLIDYPSLFPIKVMGEKVDGLVAAITSVAHQFDPVFDATTIELRESKGGKYLGVTI
TVTATSREQLDELYRTLSTHPMVKVVL

Sequences:

>Translated_107_residues
MTTSPKNPPTTPPNAAPEPAPRQESLIDYPSLFPIKVMGEKVDGLVAAITSVAHQFDPVFDATTIELRESKGGKYLGVTI
TVTATSREQLDELYRTLSTHPMVKVVL
>Mature_106_residues
TTSPKNPPTTPPNAAPEPAPRQESLIDYPSLFPIKVMGEKVDGLVAAITSVAHQFDPVFDATTIELRESKGGKYLGVTIT
VTATSREQLDELYRTLSTHPMVKVVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 11621; Mature: 11490

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPKNPPTTPPNAAPEPAPRQESLIDYPSLFPIKVMGEKVDGLVAAITSVAHQFDPVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
DATTIELRESKGGKYLGVTITVTATSREQLDELYRTLSTHPMVKVVL
CCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
TTSPKNPPTTPPNAAPEPAPRQESLIDYPSLFPIKVMGEKVDGLVAAITSVAHQFDPVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
DATTIELRESKGGKYLGVTITVTATSREQLDELYRTLSTHPMVKVVL
CCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA