| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786226
Identifier: 91786226
GI number: 91786226
Start: 339926
End: 341122
Strand: Reverse
Name: 91786226
Synonym: Bpro_0315
Alternate gene names: NA
Gene position: 341122-339926 (Counterclockwise)
Preceding gene: 91786227
Following gene: 91786225
Centisome position: 6.56
GC content: 57.89
Gene sequence:
>1197_bases ATGGCAGAACAAACGCAAAGAGCTGGGCGCTACATCCAACAACTAACGGGCTACAGAGCTTTTGTCCCCGAAGGCTTGCC CCCGAATCCGGACATTGAATTCGACGGAGAACTGCGCACCTTGCTGTCCGCCGCCGACCGGGACATCGCCCGCCTTGACG CTATCGCCACTTTGCTCCCCAACCCGGACTTGTTTGTCGCCATGTACGTGCGCCACGAGGCTGTGCTGTCGTCACAAATC GAAGGTACTCAGAGCACATTGGAAGACGTACTGGCTTTTGAGGCGCAGGGCACGAGCAACGACACGCCCAAAGACGTAGA AGAAGTCATTAACTACGTGCGCGCCATGAACCACGGCCTGCGGCGTCTGAATGAGCTGCCGTTGAGTCTGCGCCTGCTCA AAGAGATCCATGGCGAGCTCATGCAGAACGTGCGCGGTGGCGAAAAAACGCCAGGCGAATTCCGCACATCGCAAAACTGG ATCGGATCAGCCGGCAGCACGCTCGCCAATGCCTCCTTTGTGCCGCCCCCACCTCATGAGTTGATGAACGCTTTGGGCAT GCTTGAGAAATTCCTGCATGAAGGCAAATCCACAGTTCCTCTGCTCATTCGCTGCGGTCTGGCACATGCGCAGTTTGAAA CCATTCATCCTTTTCTGGATGGCAACGGCCGCGTAGGTCGCCTGCTGATCACGCTCATCCTGTGCGAGGAGCAGGCGCTG TCACGCCCTTTGCTCTACCTGTCTGTTTTTCTCAAGGCGCATCGCAGCGAGTATTACGACCGTCTTACCGCCATCCGGGA CCACGGCCATTGGGAACAGTGGCTCAAATTCTTCCTGCGTGGCGTCAGCCAGACGGCTCGGGCGGCCACACAGACAGCCA CTGACATCGTCAAAATGCGCGAGGCGCACCGTAACGCCCTCATGAAAAGCCCCAAAGCACTCAAGCTGCTGGACAGCCTC TTCCAGCAGCCACTGGTTTCACCCAACCGCATTGCAGAAATTGTGGGTTGCACCCACCCCACTGCCGTCAAACTCGCGCG CGACCTGGAAGAACGCGGCTGGCTGCGTGAAGTCACTGGCTTTGAGCGAAATCGCCTGTATCGCTACCAGCCCTATATGG AACTCTTCCACCGCGAAACCGTGGAGGCCACCTTTGCAGCGCAGTCTCCCATTCAAACAAGCGTCGGCGTCAGCTGA
Upstream 100 bases:
>100_bases CGCTCAAAATTTCATAAGGAATAGCGCCACAATTCTTGTGAAAATAATTTGACACTTATTTTCACAAGATTATCATCATG GAATTCTTATAAAAATTCCC
Downstream 100 bases:
>100_bases ACAACGGACACCGATCACACATGCCTACCCTCGACTGGCTCAACCGCGCTCAAGCCTTCACCACTTCCGGCTGCGTTCCT TACCGCCTGCTGGAAGAAGT
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MAEQTQRAGRYIQQLTGYRAFVPEGLPPNPDIEFDGELRTLLSAADRDIARLDAIATLLPNPDLFVAMYVRHEAVLSSQI EGTQSTLEDVLAFEAQGTSNDTPKDVEEVINYVRAMNHGLRRLNELPLSLRLLKEIHGELMQNVRGGEKTPGEFRTSQNW IGSAGSTLANASFVPPPPHELMNALGMLEKFLHEGKSTVPLLIRCGLAHAQFETIHPFLDGNGRVGRLLITLILCEEQAL SRPLLYLSVFLKAHRSEYYDRLTAIRDHGHWEQWLKFFLRGVSQTARAATQTATDIVKMREAHRNALMKSPKALKLLDSL FQQPLVSPNRIAEIVGCTHPTAVKLARDLEERGWLREVTGFERNRLYRYQPYMELFHRETVEATFAAQSPIQTSVGVS
Sequences:
>Translated_398_residues MAEQTQRAGRYIQQLTGYRAFVPEGLPPNPDIEFDGELRTLLSAADRDIARLDAIATLLPNPDLFVAMYVRHEAVLSSQI EGTQSTLEDVLAFEAQGTSNDTPKDVEEVINYVRAMNHGLRRLNELPLSLRLLKEIHGELMQNVRGGEKTPGEFRTSQNW IGSAGSTLANASFVPPPPHELMNALGMLEKFLHEGKSTVPLLIRCGLAHAQFETIHPFLDGNGRVGRLLITLILCEEQAL SRPLLYLSVFLKAHRSEYYDRLTAIRDHGHWEQWLKFFLRGVSQTARAATQTATDIVKMREAHRNALMKSPKALKLLDSL FQQPLVSPNRIAEIVGCTHPTAVKLARDLEERGWLREVTGFERNRLYRYQPYMELFHRETVEATFAAQSPIQTSVGVS >Mature_397_residues AEQTQRAGRYIQQLTGYRAFVPEGLPPNPDIEFDGELRTLLSAADRDIARLDAIATLLPNPDLFVAMYVRHEAVLSSQIE GTQSTLEDVLAFEAQGTSNDTPKDVEEVINYVRAMNHGLRRLNELPLSLRLLKEIHGELMQNVRGGEKTPGEFRTSQNWI GSAGSTLANASFVPPPPHELMNALGMLEKFLHEGKSTVPLLIRCGLAHAQFETIHPFLDGNGRVGRLLITLILCEEQALS RPLLYLSVFLKAHRSEYYDRLTAIRDHGHWEQWLKFFLRGVSQTARAATQTATDIVKMREAHRNALMKSPKALKLLDSLF QQPLVSPNRIAEIVGCTHPTAVKLARDLEERGWLREVTGFERNRLYRYQPYMELFHRETVEATFAAQSPIQTSVGVS
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 44845; Mature: 44714
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQTQRAGRYIQQLTGYRAFVPEGLPPNPDIEFDGELRTLLSAADRDIARLDAIATLLP CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NPDLFVAMYVRHEAVLSSQIEGTQSTLEDVLAFEAQGTSNDTPKDVEEVINYVRAMNHGL CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RRLNELPLSLRLLKEIHGELMQNVRGGEKTPGEFRTSQNWIGSAGSTLANASFVPPPPHE HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCCHHH LMNALGMLEKFLHEGKSTVPLLIRCGLAHAQFETIHPFLDGNGRVGRLLITLILCEEQAL HHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH SRPLLYLSVFLKAHRSEYYDRLTAIRDHGHWEQWLKFFLRGVSQTARAATQTATDIVKMR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAHRNALMKSPKALKLLDSLFQQPLVSPNRIAEIVGCTHPTAVKLARDLEERGWLREVTG HHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHC FERNRLYRYQPYMELFHRETVEATFAAQSPIQTSVGVS CHHHCEEEECHHHHHHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure AEQTQRAGRYIQQLTGYRAFVPEGLPPNPDIEFDGELRTLLSAADRDIARLDAIATLLP CCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NPDLFVAMYVRHEAVLSSQIEGTQSTLEDVLAFEAQGTSNDTPKDVEEVINYVRAMNHGL CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RRLNELPLSLRLLKEIHGELMQNVRGGEKTPGEFRTSQNWIGSAGSTLANASFVPPPPHE HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCCHHH LMNALGMLEKFLHEGKSTVPLLIRCGLAHAQFETIHPFLDGNGRVGRLLITLILCEEQAL HHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH SRPLLYLSVFLKAHRSEYYDRLTAIRDHGHWEQWLKFFLRGVSQTARAATQTATDIVKMR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAHRNALMKSPKALKLLDSLFQQPLVSPNRIAEIVGCTHPTAVKLARDLEERGWLREVTG HHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHC FERNRLYRYQPYMELFHRETVEATFAAQSPIQTSVGVS CHHHCEEEECHHHHHHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]