| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yddG [C]
Identifier: 91786222
GI number: 91786222
Start: 336104
End: 337048
Strand: Reverse
Name: yddG [C]
Synonym: Bpro_0311
Alternate gene names: 91786222
Gene position: 337048-336104 (Counterclockwise)
Preceding gene: 91786223
Following gene: 91786220
Centisome position: 6.48
GC content: 63.6
Gene sequence:
>945_bases GTGACCGAATGCAGGCGGCCCGGGCGTCGTTGCGCACTGGCGAGACCGTGCTTGCGCGACGATCGCACAACCCAAACACC CTATGCTTGCGCCATGCCCGCCAATTTATATGCACTGGGCGCCATCGCGCTATGGATCTCCCTGGCCTCGCTCGGCGTCT CGCTCAAACACATTCCGCCCTTTTTGCTGACCGGCATGGCGCTGCTGATGGGTAGCCTGCTGGCATTGCCGTTGGTGCTG AAAGACAGACAGTTGTGGAAGGTGCCCGCCAGGACCTTTGTGATGGGCATTTATGGCCTGTTCGGCTACCACTTCCTGCT CTTCATCGCCCTGCGCCACGCGCCACCCGTGGAGGCCAACCTGGTCAACTACCTGTGGCCGCTGTTGATGGTGGTGCTCG CGCCGTTGTTCCTGCCAGGTGTGCGACTGCGCGTCCTGCATGTGATCGCGGCGCTGCTGGGTTTTGCCGGCGCGGCGATT GCCATCCTCGGCGCCGACCAGGGCCTGGCGGGAGGAAGCGGAGCGCATGGCTGGTCTTGGGGTTACCTGCCTGCGCTGGG CGCGGCCTTGATCTGGGCCAGTTACTCGCTGCTGACCCGGCGCGTACCAGCCTTTCCCACCGCCGCCATCGGGCTTTTTG GCATGGTCTCGGGGCTGCTGTCGCTGCTGTGTCATTTTCTGCTGGAGCCGCAGGTGGCATTGTCTGGCCAGGACTGGCTG CTGCTGGCCGTGACAGGCCTGGGTCCGCTGGGCGCCGCTTTTTTTCTGTGGGACAAAGCGCTCAAATCAGGCGATGTGCG GCAAATCGGCATCCTGAGTTACCTGACCCCCTTGGGCTCCACCGCCTTGCTGTTGGTGGTCAGTGGCAGGGCCTTGACCA CCAGCATCGCCGTTGCCGCCTTGTTGATTCTGGGCGCTGCGGTATTGGGCACCCGCTCAAGATAG
Upstream 100 bases:
>100_bases GTCCAACCAGGCCGACAAGGCCGACCAATAACGGCACGGATCATTCGGGCGGCATTTGCCTGCCCAGCCCCCGCCCCGCG GAACGGGTTATCGGAGACCG
Downstream 100 bases:
>100_bases CCAAGGCAAGTCAGGCCCCCACAAAACGTACGATCGGGCAATAAAGAAAGGGTGGCGACGGCTGCGCGCCATCACCACCC TCCTCCCTACCCGGTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTECRRPGRRCALARPCLRDDRTTQTPYACAMPANLYALGAIALWISLASLGVSLKHIPPFLLTGMALLMGSLLALPLVL KDRQLWKVPARTFVMGIYGLFGYHFLLFIALRHAPPVEANLVNYLWPLLMVVLAPLFLPGVRLRVLHVIAALLGFAGAAI AILGADQGLAGGSGAHGWSWGYLPALGAALIWASYSLLTRRVPAFPTAAIGLFGMVSGLLSLLCHFLLEPQVALSGQDWL LLAVTGLGPLGAAFFLWDKALKSGDVRQIGILSYLTPLGSTALLLVVSGRALTTSIAVAALLILGAAVLGTRSR
Sequences:
>Translated_314_residues MTECRRPGRRCALARPCLRDDRTTQTPYACAMPANLYALGAIALWISLASLGVSLKHIPPFLLTGMALLMGSLLALPLVL KDRQLWKVPARTFVMGIYGLFGYHFLLFIALRHAPPVEANLVNYLWPLLMVVLAPLFLPGVRLRVLHVIAALLGFAGAAI AILGADQGLAGGSGAHGWSWGYLPALGAALIWASYSLLTRRVPAFPTAAIGLFGMVSGLLSLLCHFLLEPQVALSGQDWL LLAVTGLGPLGAAFFLWDKALKSGDVRQIGILSYLTPLGSTALLLVVSGRALTTSIAVAALLILGAAVLGTRSR >Mature_313_residues TECRRPGRRCALARPCLRDDRTTQTPYACAMPANLYALGAIALWISLASLGVSLKHIPPFLLTGMALLMGSLLALPLVLK DRQLWKVPARTFVMGIYGLFGYHFLLFIALRHAPPVEANLVNYLWPLLMVVLAPLFLPGVRLRVLHVIAALLGFAGAAIA ILGADQGLAGGSGAHGWSWGYLPALGAALIWASYSLLTRRVPAFPTAAIGLFGMVSGLLSLLCHFLLEPQVALSGQDWLL LAVTGLGPLGAAFFLWDKALKSGDVRQIGILSYLTPLGSTALLLVVSGRALTTSIAVAALLILGAAVLGTRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI145693132, Length=204, Percent_Identity=29.9019607843137, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33322; Mature: 33191
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTECRRPGRRCALARPCLRDDRTTQTPYACAMPANLYALGAIALWISLASLGVSLKHIPP CCCCCCCCHHHHHHCCHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHCCH FLLTGMALLMGSLLALPLVLKDRQLWKVPARTFVMGIYGLFGYHFLLFIALRHAPPVEAN HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LVNYLWPLLMVVLAPLFLPGVRLRVLHVIAALLGFAGAAIAILGADQGLAGGSGAHGWSW HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC GYLPALGAALIWASYSLLTRRVPAFPTAAIGLFGMVSGLLSLLCHFLLEPQVALSGQDWL CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEE LLAVTGLGPLGAAFFLWDKALKSGDVRQIGILSYLTPLGSTALLLVVSGRALTTSIAVAA EEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH LLILGAAVLGTRSR HHHHHHHHHCCCCC >Mature Secondary Structure TECRRPGRRCALARPCLRDDRTTQTPYACAMPANLYALGAIALWISLASLGVSLKHIPP CCCCCCCHHHHHHCCHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHCCH FLLTGMALLMGSLLALPLVLKDRQLWKVPARTFVMGIYGLFGYHFLLFIALRHAPPVEAN HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LVNYLWPLLMVVLAPLFLPGVRLRVLHVIAALLGFAGAAIAILGADQGLAGGSGAHGWSW HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC GYLPALGAALIWASYSLLTRRVPAFPTAAIGLFGMVSGLLSLLCHFLLEPQVALSGQDWL CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEE LLAVTGLGPLGAAFFLWDKALKSGDVRQIGILSYLTPLGSTALLLVVSGRALTTSIAVAA EEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH LLILGAAVLGTRSR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA