| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786220
Identifier: 91786220
GI number: 91786220
Start: 333319
End: 334014
Strand: Reverse
Name: 91786220
Synonym: Bpro_0309
Alternate gene names: NA
Gene position: 334014-333319 (Counterclockwise)
Preceding gene: 91786222
Following gene: 91786219
Centisome position: 6.42
GC content: 64.22
Gene sequence:
>696_bases ATGTGGACCGCTGCCATGACACGTCAGGCCCTTCGCGCCCGTCTCGTGCCTTGGGGCAGAGGGTGCTTGCTCGCCCTGCT GGTGGCGCTGGGCGCGTCAATCGCGGCACCTGACCTCGACAAAACACAGGCCCTGGCCCTGCAGCGCTACGGCTCGCGGG CTTCAGAGACGGTGGTGGCGTGGCGCCGGCTGATCGAAGAATCGCGCGCGCTGCCCGATGCGGACAAGCTCGACAAGGTC AACACCTTCTTCAATCGACGCGTGTTGTTTGAAAGCGACATAGCCATCTGGCAGCAGGAGGATTACTGGGCCACGCCGCT CGAGTTCATGGGCCGCGGTGCCGGAGATTGCGAAGATTTCTCGATAGCCAAGTACCTCACGCTGCAAATGCTGGGCATCG GCAACGACCGCTTGCGCCTGATTTACGTCCGCGCCCGCATCGGTTCGACCACGACCGTGGCCCACATGGTGCTGGGTTTC TATCCCCAGCCGACCGACGAACCGCTGATTCTCGACAACCTGATCAGCAGCGTGCGCCCTGCCTCGATGCGCAGCGACCT TGCACCGGTCTTCAGTTTCAACAGCGCCGGTTTGTGGGTGGGTGGCGGCACGTCCTCCCTGGCCGACCCCACCACACGCC TGTCGCGCTGGCGCGATGTGCTTGACCGCATGCGCCAGGAAGGCCTGTCGCCATGA
Upstream 100 bases:
>100_bases AGCCTCAAAATGTTGGTTTGGATATCCCCTATTCTTGGGATGCGCATCACGCGCCGCGCAGGGTTTGCTGCCCCGCCGGC TTTGGGTTAGGCTTGCCGCC
Downstream 100 bases:
>100_bases TCTCCTCACCCCCTGATCCGTTCCTGCCCTGACCATTTACGCCCTGATTCATTCCCTCACTCAGCGAGTTACCACCATGT CCCTTATCAAACAGCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; Transglutaminase Domain Protein; OmpA/MotB; Sulfate Adenylyltransferase; Lipoprotein
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MWTAAMTRQALRARLVPWGRGCLLALLVALGASIAAPDLDKTQALALQRYGSRASETVVAWRRLIEESRALPDADKLDKV NTFFNRRVLFESDIAIWQQEDYWATPLEFMGRGAGDCEDFSIAKYLTLQMLGIGNDRLRLIYVRARIGSTTTVAHMVLGF YPQPTDEPLILDNLISSVRPASMRSDLAPVFSFNSAGLWVGGGTSSLADPTTRLSRWRDVLDRMRQEGLSP
Sequences:
>Translated_231_residues MWTAAMTRQALRARLVPWGRGCLLALLVALGASIAAPDLDKTQALALQRYGSRASETVVAWRRLIEESRALPDADKLDKV NTFFNRRVLFESDIAIWQQEDYWATPLEFMGRGAGDCEDFSIAKYLTLQMLGIGNDRLRLIYVRARIGSTTTVAHMVLGF YPQPTDEPLILDNLISSVRPASMRSDLAPVFSFNSAGLWVGGGTSSLADPTTRLSRWRDVLDRMRQEGLSP >Mature_231_residues MWTAAMTRQALRARLVPWGRGCLLALLVALGASIAAPDLDKTQALALQRYGSRASETVVAWRRLIEESRALPDADKLDKV NTFFNRRVLFESDIAIWQQEDYWATPLEFMGRGAGDCEDFSIAKYLTLQMLGIGNDRLRLIYVRARIGSTTTVAHMVLGF YPQPTDEPLILDNLISSVRPASMRSDLAPVFSFNSAGLWVGGGTSSLADPTTRLSRWRDVLDRMRQEGLSP
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25750; Mature: 25750
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTAAMTRQALRARLVPWGRGCLLALLVALGASIAAPDLDKTQALALQRYGSRASETVVA CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH WRRLIEESRALPDADKLDKVNTFFNRRVLFESDIAIWQQEDYWATPLEFMGRGAGDCEDF HHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCHHEEECCCCCCCCHHHHCCCCCCCCHH SIAKYLTLQMLGIGNDRLRLIYVRARIGSTTTVAHMVLGFYPQPTDEPLILDNLISSVRP HHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC ASMRSDLAPVFSFNSAGLWVGGGTSSLADPTTRLSRWRDVLDRMRQEGLSP HHHHHHCCHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWTAAMTRQALRARLVPWGRGCLLALLVALGASIAAPDLDKTQALALQRYGSRASETVVA CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH WRRLIEESRALPDADKLDKVNTFFNRRVLFESDIAIWQQEDYWATPLEFMGRGAGDCEDF HHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCHHEEECCCCCCCCHHHHCCCCCCCCHH SIAKYLTLQMLGIGNDRLRLIYVRARIGSTTTVAHMVLGFYPQPTDEPLILDNLISSVRP HHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC ASMRSDLAPVFSFNSAGLWVGGGTSSLADPTTRLSRWRDVLDRMRQEGLSP HHHHHHCCHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA