| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786223
Identifier: 91786223
GI number: 91786223
Start: 337118
End: 337855
Strand: Reverse
Name: 91786223
Synonym: Bpro_0312
Alternate gene names: NA
Gene position: 337855-337118 (Counterclockwise)
Preceding gene: 91786224
Following gene: 91786222
Centisome position: 6.5
GC content: 68.29
Gene sequence:
>738_bases ATGGACAGGCCGCAGGGCTCGCTGTCGCTACGCCGCTACGGCGCCTCGCACGGCAGCCATGCGCATGCGCACTTTCAGGT GCTGCTCGGACTGGAGGGCGTGCTGGAGCTCGAGGTGCAGGGCCGCGGCAGGCGCATTGCCGCCGGCGAGGGCTGCGTGA TTATTCCAGGCGAGCGGCACGACTTTGAATCGAAGCAGGGCAGCCGCTGCCTGGTGCTGGACACGCACCACGCCGGCTGG TCGTATTGCGACCCGTCGCCGGCACAAAGCACAGAAGCCATCGCCCTGGCCCATTATCTGGAGCAGGCCTTGCAGCAGCA GGGCAGCCTGGCCCACCACTGCGGCCCGCTGTTGTTGCTGCAGGCATGGCAAAGGCCGGCAGCTCTCGCCGAGAAGACGG CGCGGCCAGCGCGACATCAGCGCGCCATTGACTGGCACCAGCTGGCTGGCTGGACGCAGCTGCGGCTGCACGAACCCCTG AGCGTTGCGCAGCTCGCCGCGCAGGCTTTCCTGAGCCCGACCCAGTTCGCAGCGCGGTGCCGTCGCGAAACCGGCCAGAG CGTCATGCAATGGCTGCGCAGCCAGCGTCTGGCACTGGCTTTGCAATTGCAGGGGCGCGGCGTGACGGTTGCAGACACGG CCCTGCGATGCGGCTACCAGTCGCCCTCGGCACTGACAGCGGCGCTGCGGCGCCAGAAGCTCACCGAGTCCAACCAGGCC GACAAGGCCGACCAATAA
Upstream 100 bases:
>100_bases CGCCGTGGGTGCAATGGTGCGCTCCAGCTACCACGCCGACCAGCAGGCCCACGCCGCGGGTGTCGCCGACAAGGCCGACG CCGCATCGGCGCCCTGACCC
Downstream 100 bases:
>100_bases CGGCACGGATCATTCGGGCGGCATTTGCCTGCCCAGCCCCCGCCCCGCGGAACGGGTTATCGGAGACCGGTGACCGAATG CAGGCGGCCCGGGCGTCGTT
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: AraC Family Transcriptional Regulator
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MDRPQGSLSLRRYGASHGSHAHAHFQVLLGLEGVLELEVQGRGRRIAAGEGCVIIPGERHDFESKQGSRCLVLDTHHAGW SYCDPSPAQSTEAIALAHYLEQALQQQGSLAHHCGPLLLLQAWQRPAALAEKTARPARHQRAIDWHQLAGWTQLRLHEPL SVAQLAAQAFLSPTQFAARCRRETGQSVMQWLRSQRLALALQLQGRGVTVADTALRCGYQSPSALTAALRRQKLTESNQA DKADQ
Sequences:
>Translated_245_residues MDRPQGSLSLRRYGASHGSHAHAHFQVLLGLEGVLELEVQGRGRRIAAGEGCVIIPGERHDFESKQGSRCLVLDTHHAGW SYCDPSPAQSTEAIALAHYLEQALQQQGSLAHHCGPLLLLQAWQRPAALAEKTARPARHQRAIDWHQLAGWTQLRLHEPL SVAQLAAQAFLSPTQFAARCRRETGQSVMQWLRSQRLALALQLQGRGVTVADTALRCGYQSPSALTAALRRQKLTESNQA DKADQ >Mature_245_residues MDRPQGSLSLRRYGASHGSHAHAHFQVLLGLEGVLELEVQGRGRRIAAGEGCVIIPGERHDFESKQGSRCLVLDTHHAGW SYCDPSPAQSTEAIALAHYLEQALQQQGSLAHHCGPLLLLQAWQRPAALAEKTARPARHQRAIDWHQLAGWTQLRLHEPL SVAQLAAQAFLSPTQFAARCRRETGQSVMQWLRSQRLALALQLQGRGVTVADTALRCGYQSPSALTAALRRQKLTESNQA DKADQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26946; Mature: 26946
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPQGSLSLRRYGASHGSHAHAHFQVLLGLEGVLELEVQGRGRRIAAGEGCVIIPGERH CCCCCCCHHHHHHCCCCCCCHHHHHHHEECCCCEEEEEECCCCCEEECCCCEEEECCCCC DFESKQGSRCLVLDTHHAGWSYCDPSPAQSTEAIALAHYLEQALQQQGSLAHHCGPLLLL CCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QAWQRPAALAEKTARPARHQRAIDWHQLAGWTQLRLHEPLSVAQLAAQAFLSPTQFAARC HHHCCHHHHHHHHCCHHHHHHCCCHHHHCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHH RRETGQSVMQWLRSQRLALALQLQGRGVTVADTALRCGYQSPSALTAALRRQKLTESNQA HHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC DKADQ CCCCC >Mature Secondary Structure MDRPQGSLSLRRYGASHGSHAHAHFQVLLGLEGVLELEVQGRGRRIAAGEGCVIIPGERH CCCCCCCHHHHHHCCCCCCCHHHHHHHEECCCCEEEEEECCCCCEEECCCCEEEECCCCC DFESKQGSRCLVLDTHHAGWSYCDPSPAQSTEAIALAHYLEQALQQQGSLAHHCGPLLLL CCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QAWQRPAALAEKTARPARHQRAIDWHQLAGWTQLRLHEPLSVAQLAAQAFLSPTQFAARC HHHCCHHHHHHHHCCHHHHHHCCCHHHHCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHH RRETGQSVMQWLRSQRLALALQLQGRGVTVADTALRCGYQSPSALTAALRRQKLTESNQA HHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC DKADQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA