| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786144
Identifier: 91786144
GI number: 91786144
Start: 255907
End: 256620
Strand: Direct
Name: 91786144
Synonym: Bpro_0233
Alternate gene names: NA
Gene position: 255907-256620 (Clockwise)
Preceding gene: 91786143
Following gene: 91786145
Centisome position: 4.92
GC content: 67.37
Gene sequence:
>714_bases ATGAGGCTGATTCTTTTCAAACCCCATCAAGACGCTGCGAATCCAACGGCTGATGCCTGGCGGTTTTATTGGGTGAAGTA CCTTTTTTGTTCCGTGGCTGCGACCCTGGTGCTGGGCGGCTGCTCGAGCCTGCCGGACAAGCCAACGCGCGCCACCATGT ACGACTTCGGGCCGGGTGCGCTGTCACTGCGTCCCGGCACGCGCGAGGCGCCCTTGCCCCCGCTGGCGATCGACGACATT GGAACCAGTGGCGGCGCGCTGGACAACATGGCGGTGCTCTACCGCCTGGGTTATGCGGATGCGCAGCAGTTGCGCCCCTA TTCCCAGGCGCGCTGGAGCATGCCACCCGCGCAGCTGATACGCCAGCGCCTGCGCGAGCAGCTGAGCCAGCGTCGCGCGG TCTTCAATGCCGGTGAGAGCGCGGCGCTGAACCGCACCCAGAACGCGGTGCTGCCGCAGCTGCTGCGGCTGCACCTGGAG GAGTTCAGCCATCTCTTCACCGCACCCGATGCCAGCGTCGGCCTGATTCGCCTGCGCGCCACGCTGGTGGAAGTCACACC CGCCGGCGAAAAGCTGGTGGCGCAGCGCCATGTGATCGTGCAGCGTCCCGCGCCCAGCGCCGATGCCCCCGGCGGCGTGC GCGCGCTGACAGCGGCCACCGATGCGGCGATCGAAGAGCTGGAGCAGTGGTTGCAGCAGGCGCCCGCGCACTAA
Upstream 100 bases:
>100_bases TGAACGCGGTGGACGACAACCCGCAGTCGCTGATTTTTGGCAACGGACCGCCGGTGCCGGGTCCCGGCGAGGCAGGATTT TCCGCCAACGGGGGGAAAAA
Downstream 100 bases:
>100_bases ACCAGCGGCACCCATGAAGACACTTCAAGAGCAACTCGACGCTGCCGGCCTGCACGTGTTTGGCTGCTGCGAGCGACTGA GCGCCTATGGTCCCGGCCTG
Product: putative lipoprotein
Products: NA
Alternate protein names: Transcriptional Regulator; ABC-Type Transporter Auxiliary Component
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRLILFKPHQDAANPTADAWRFYWVKYLFCSVAATLVLGGCSSLPDKPTRATMYDFGPGALSLRPGTREAPLPPLAIDDI GTSGGALDNMAVLYRLGYADAQQLRPYSQARWSMPPAQLIRQRLREQLSQRRAVFNAGESAALNRTQNAVLPQLLRLHLE EFSHLFTAPDASVGLIRLRATLVEVTPAGEKLVAQRHVIVQRPAPSADAPGGVRALTAATDAAIEELEQWLQQAPAH
Sequences:
>Translated_237_residues MRLILFKPHQDAANPTADAWRFYWVKYLFCSVAATLVLGGCSSLPDKPTRATMYDFGPGALSLRPGTREAPLPPLAIDDI GTSGGALDNMAVLYRLGYADAQQLRPYSQARWSMPPAQLIRQRLREQLSQRRAVFNAGESAALNRTQNAVLPQLLRLHLE EFSHLFTAPDASVGLIRLRATLVEVTPAGEKLVAQRHVIVQRPAPSADAPGGVRALTAATDAAIEELEQWLQQAPAH >Mature_237_residues MRLILFKPHQDAANPTADAWRFYWVKYLFCSVAATLVLGGCSSLPDKPTRATMYDFGPGALSLRPGTREAPLPPLAIDDI GTSGGALDNMAVLYRLGYADAQQLRPYSQARWSMPPAQLIRQRLREQLSQRRAVFNAGESAALNRTQNAVLPQLLRLHLE EFSHLFTAPDASVGLIRLRATLVEVTPAGEKLVAQRHVIVQRPAPSADAPGGVRALTAATDAAIEELEQWLQQAPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25925; Mature: 25925
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILFKPHQDAANPTADAWRFYWVKYLFCSVAATLVLGGCSSLPDKPTRATMYDFGPGA CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCE LSLRPGTREAPLPPLAIDDIGTSGGALDNMAVLYRLGYADAQQLRPYSQARWSMPPAQLI EEECCCCCCCCCCCEEHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCHHHHH RQRLREQLSQRRAVFNAGESAALNRTQNAVLPQLLRLHLEEFSHLFTAPDASVGLIRLRA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLVEVTPAGEKLVAQRHVIVQRPAPSADAPGGVRALTAATDAAIEELEQWLQQAPAH HHHEECCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLILFKPHQDAANPTADAWRFYWVKYLFCSVAATLVLGGCSSLPDKPTRATMYDFGPGA CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCE LSLRPGTREAPLPPLAIDDIGTSGGALDNMAVLYRLGYADAQQLRPYSQARWSMPPAQLI EEECCCCCCCCCCCEEHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCHHHHH RQRLREQLSQRRAVFNAGESAALNRTQNAVLPQLLRLHLEEFSHLFTAPDASVGLIRLRA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLVEVTPAGEKLVAQRHVIVQRPAPSADAPGGVRALTAATDAAIEELEQWLQQAPAH HHHEECCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA