| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786145
Identifier: 91786145
GI number: 91786145
Start: 256634
End: 257194
Strand: Direct
Name: 91786145
Synonym: Bpro_0234
Alternate gene names: NA
Gene position: 256634-257194 (Clockwise)
Preceding gene: 91786144
Following gene: 91786146
Centisome position: 4.94
GC content: 65.78
Gene sequence:
>561_bases ATGAAGACACTTCAAGAGCAACTCGACGCTGCCGGCCTGCACGTGTTTGGCTGCTGCGAGCGACTGAGCGCCTATGGTCC CGGCCTGTTGCAAAATTCTCCGCTGCTGCAGGACTTCACCCCTGCGGAGGCAGACATCCTGGGCGCCTCCATGCTGCTGG TGCGTGCCGAGCCCGGCCAGGTGATGATCCGGGAGGGCGAGTCGGGTGACTGGATGATGCTGATCCTCAAAGGTACCGTC GACGTGACCAAGCGCGTCGAGCCGCAGGGCGACGCGGCCGCGGCGGACGCGGATGCGCCGGCCCCGGTCTCGCGGGTGGC CGTGGTGCGCAGCGGCGCGGCCGTGGGTGACATGTCCATGCTCGACAGCGAGCCGCGCTACGCCAGCTGCACCGCCATCG AAGCCGTAGAGGCCGGCGTGTGGGGGCGCCATGAAATTGCCCGGTTGATCCGCGACCACCCTGGCGTGGGCGCCAAGCTG CTGGTCAAAATCACCCAGATAATGGCGCAGCGCCTGCGCAACACCAGCAACCAGCTGGTCAAGTTGCTGCAGAAAAAATA A
Upstream 100 bases:
>100_bases CCCGGCGGCGTGCGCGCGCTGACAGCGGCCACCGATGCGGCGATCGAAGAGCTGGAGCAGTGGTTGCAGCAGGCGCCCGC GCACTAAACCAGCGGCACCC
Downstream 100 bases:
>100_bases GTTCACCCCCGTCCAGGCTCACTTCGTGTAGCCTGTTCCCCCCTCAAGGGGGCGGCGCCTGGGGCCGGCGAAGCCGGACC CGCGGCCCCCACTGGTGAAA
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKTLQEQLDAAGLHVFGCCERLSAYGPGLLQNSPLLQDFTPAEADILGASMLLVRAEPGQVMIREGESGDWMMLILKGTV DVTKRVEPQGDAAAADADAPAPVSRVAVVRSGAAVGDMSMLDSEPRYASCTAIEAVEAGVWGRHEIARLIRDHPGVGAKL LVKITQIMAQRLRNTSNQLVKLLQKK
Sequences:
>Translated_186_residues MKTLQEQLDAAGLHVFGCCERLSAYGPGLLQNSPLLQDFTPAEADILGASMLLVRAEPGQVMIREGESGDWMMLILKGTV DVTKRVEPQGDAAAADADAPAPVSRVAVVRSGAAVGDMSMLDSEPRYASCTAIEAVEAGVWGRHEIARLIRDHPGVGAKL LVKITQIMAQRLRNTSNQLVKLLQKK >Mature_186_residues MKTLQEQLDAAGLHVFGCCERLSAYGPGLLQNSPLLQDFTPAEADILGASMLLVRAEPGQVMIREGESGDWMMLILKGTV DVTKRVEPQGDAAAADADAPAPVSRVAVVRSGAAVGDMSMLDSEPRYASCTAIEAVEAGVWGRHEIARLIRDHPGVGAKL LVKITQIMAQRLRNTSNQLVKLLQKK
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19930; Mature: 19930
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00888 CNMP_BINDING_1 ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLQEQLDAAGLHVFGCCERLSAYGPGLLQNSPLLQDFTPAEADILGASMLLVRAEPGQ CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCC VMIREGESGDWMMLILKGTVDVTKRVEPQGDAAAADADAPAPVSRVAVVRSGAAVGDMSM EEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHH LDSEPRYASCTAIEAVEAGVWGRHEIARLIRDHPGVGAKLLVKITQIMAQRLRNTSNQLV HCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHH KLLQKK HHHHCC >Mature Secondary Structure MKTLQEQLDAAGLHVFGCCERLSAYGPGLLQNSPLLQDFTPAEADILGASMLLVRAEPGQ CCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCC VMIREGESGDWMMLILKGTVDVTKRVEPQGDAAAADADAPAPVSRVAVVRSGAAVGDMSM EEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHH LDSEPRYASCTAIEAVEAGVWGRHEIARLIRDHPGVGAKLLVKITQIMAQRLRNTSNQLV HCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHH KLLQKK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA