| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786143
Identifier: 91786143
GI number: 91786143
Start: 254978
End: 255910
Strand: Direct
Name: 91786143
Synonym: Bpro_0232
Alternate gene names: NA
Gene position: 254978-255910 (Clockwise)
Preceding gene: 91786142
Following gene: 91786144
Centisome position: 4.9
GC content: 64.74
Gene sequence:
>933_bases ATGGAAAACAAAGCCCATGCCATGGCCGCCGGCGCCTTTGTGCTGGTGGTCACTGCCCTGCTGGTGATGCTGGCAGTTTG GCTCACGCGCGACAACACACAGCGCAACCTGTATGAAATGAGTACCGGTGAAAGCGTCTCGGGCCTGCAGCCCCAGGCTG CGGTGCGCTTTCGCGGCGTGCCGGTCGGCAAGGTCGAGTTGATCGGCTTTGACACCAAGGTCAAGGGCAACGTGCTGATT CGCGTGTCGATTGACCGCAGTGCACCCGTGACGAAATCGACGTTTGCCACGGTGGCCTCCCAGGGCGTGACGGGGCTGGG CTTTATTCAGCTCGACGACGATGGCTCCTCGCCGGAACGGCTGGTACCCAACGACGAAGACCCGCCGCGCATACCGCTCA AGCCGGGCGGCCTGGACAAGCTGCTCAAGCAAAGCGATGTGATCTTTGACCAGGTGGAGCAGGCCAGCACACGGCTGAAC AAGCTGCTCTCCGATGAGAACCAGGCCGCGGTGACCTCTGCCATCACGCAACTCGGCGAGGCGGCCGGCAGCATCAACCG CGTGGCCAGGGGCCTTGAGCCCACGGTGGCGACCTTGCCTGGCCTGTCACGCGACGCCACCGTCACGCTGAAATCCGTCA AGACGGCTGCAGACGACGTCAGCACGACAGCCACCCGCTTGAACGCAAAAGGCGGGACGCTCGACAAGCTTTCCGACGGC GGAACGGCCCTGGCCGCGGGCGTGGAAACCTTCAGCGCCGGCACGCTGCCCAAGCTGGGCGAGGTGGCCGATGAAACCGC GCGCACCATGCGCCAGCTGCGCCGCACCGTGAACGCGGTGGACGACAACCCGCAGTCGCTGATTTTTGGCAACGGACCGC CGGTGCCGGGTCCCGGCGAGGCAGGATTTTCCGCCAACGGGGGGAAAAAATGA
Upstream 100 bases:
>100_bases TCATCCATGAATTTTTTCTCGGCGAAAGGGGCCAGCGCGCGATGGAACTGCTGCGCGAATACCCCTTCACGGTCTAGCGC AAACCAGAAAGGTCTTCAAG
Downstream 100 bases:
>100_bases GGCTGATTCTTTTCAAACCCCATCAAGACGCTGCGAATCCAACGGCTGATGCCTGGCGGTTTTATTGGGTGAAGTACCTT TTTTGTTCCGTGGCTGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC-Type Transporter Periplasmic Component; Mce Related Family; Mce Family Protein; Mammalian Cell Entry ; Signal Peptide Protein; ABC-Type Transport System Protein; Periplasmic Protein; Exported Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MENKAHAMAAGAFVLVVTALLVMLAVWLTRDNTQRNLYEMSTGESVSGLQPQAAVRFRGVPVGKVELIGFDTKVKGNVLI RVSIDRSAPVTKSTFATVASQGVTGLGFIQLDDDGSSPERLVPNDEDPPRIPLKPGGLDKLLKQSDVIFDQVEQASTRLN KLLSDENQAAVTSAITQLGEAAGSINRVARGLEPTVATLPGLSRDATVTLKSVKTAADDVSTTATRLNAKGGTLDKLSDG GTALAAGVETFSAGTLPKLGEVADETARTMRQLRRTVNAVDDNPQSLIFGNGPPVPGPGEAGFSANGGKK
Sequences:
>Translated_310_residues MENKAHAMAAGAFVLVVTALLVMLAVWLTRDNTQRNLYEMSTGESVSGLQPQAAVRFRGVPVGKVELIGFDTKVKGNVLI RVSIDRSAPVTKSTFATVASQGVTGLGFIQLDDDGSSPERLVPNDEDPPRIPLKPGGLDKLLKQSDVIFDQVEQASTRLN KLLSDENQAAVTSAITQLGEAAGSINRVARGLEPTVATLPGLSRDATVTLKSVKTAADDVSTTATRLNAKGGTLDKLSDG GTALAAGVETFSAGTLPKLGEVADETARTMRQLRRTVNAVDDNPQSLIFGNGPPVPGPGEAGFSANGGKK >Mature_310_residues MENKAHAMAAGAFVLVVTALLVMLAVWLTRDNTQRNLYEMSTGESVSGLQPQAAVRFRGVPVGKVELIGFDTKVKGNVLI RVSIDRSAPVTKSTFATVASQGVTGLGFIQLDDDGSSPERLVPNDEDPPRIPLKPGGLDKLLKQSDVIFDQVEQASTRLN KLLSDENQAAVTSAITQLGEAAGSINRVARGLEPTVATLPGLSRDATVTLKSVKTAADDVSTTATRLNAKGGTLDKLSDG GTALAAGVETFSAGTLPKLGEVADETARTMRQLRRTVNAVDDNPQSLIFGNGPPVPGPGEAGFSANGGKK
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32330; Mature: 32330
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKAHAMAAGAFVLVVTALLVMLAVWLTRDNTQRNLYEMSTGESVSGLQPQAAVRFRGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHEECCC PVGKVELIGFDTKVKGNVLIRVSIDRSAPVTKSTFATVASQGVTGLGFIQLDDDGSSPER CCCEEEEEEECCEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCC LVPNDEDPPRIPLKPGGLDKLLKQSDVIFDQVEQASTRLNKLLSDENQAAVTSAITQLGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAGSINRVARGLEPTVATLPGLSRDATVTLKSVKTAADDVSTTATRLNAKGGTLDKLSDG HHHHHHHHHHCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTALAAGVETFSAGTLPKLGEVADETARTMRQLRRTVNAVDDNPQSLIFGNGPPVPGPGE CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC AGFSANGGKK CCCCCCCCCC >Mature Secondary Structure MENKAHAMAAGAFVLVVTALLVMLAVWLTRDNTQRNLYEMSTGESVSGLQPQAAVRFRGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHEECCC PVGKVELIGFDTKVKGNVLIRVSIDRSAPVTKSTFATVASQGVTGLGFIQLDDDGSSPER CCCEEEEEEECCEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCC LVPNDEDPPRIPLKPGGLDKLLKQSDVIFDQVEQASTRLNKLLSDENQAAVTSAITQLGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AAGSINRVARGLEPTVATLPGLSRDATVTLKSVKTAADDVSTTATRLNAKGGTLDKLSDG HHHHHHHHHHCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTALAAGVETFSAGTLPKLGEVADETARTMRQLRRTVNAVDDNPQSLIFGNGPPVPGPGE CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC AGFSANGGKK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA