| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786000
Identifier: 91786000
GI number: 91786000
Start: 90837
End: 91667
Strand: Direct
Name: 91786000
Synonym: Bpro_0087
Alternate gene names: NA
Gene position: 90837-91667 (Clockwise)
Preceding gene: 91785999
Following gene: 91786001
Centisome position: 1.75
GC content: 65.1
Gene sequence:
>831_bases ATGAAGACAACAATCGCGCTGTTTGGCGCGGGCGGAAAAATGGGGGTTCGGCTGGCCAGGAACCTGCAGGGCTCGGACTA CCGGGTGCGCCATGTCGAGGTCGGCGCCGTTGGCCGGCAGCGCCTGAAGGACGAACTGGGCGTCGACTGCGTGTCAGTGG ATGCCGCGCTGGACGGCGCCGGGGTGGTGATCCTGGCTGTTCCCGACACCCTGATCGGCAAGGTCGCCGCCGAGATTTCG CCGAAGCTGCAGCCTGGCACCATGGTGATCACGCTGGACGCCGCCGCGCCCTTTGCCGGCCACCTGCCGGACCGGCCGGA CCTGGTCTACTTCGTCGCCCATCCCTGCCACCCGCCCATCTTCAATGACGAAAGCACGAGCGAAGCGCGGCGCGACTTCT TTGGCGGCGCGCATGCCAAGCAGTCCATCGTCAGCGCCCTGATGCAGGGCACGGACGCAGACTTTGAATTGGGCGAGGCG GTGGCCAAGGTGATTTACCAGCCCATCCTGCGCTCCTATCGCCTCACGGTAGAGCAGATGGCTTTGCTGGAGCCCGGCCT GTCCGAAACCGTCTGCGCCACGCTGCTCGACGTGATGCGCGAAGCGATGGACGAGGTGGTGGCGCGTGGCGTGCCCAAGG ACGCTGCCCGCGACTTCCTGCTGGGCCACATGACCATTCTGGGTGCGGTGATCTTCAAGGAGATCCCGGGCCAGTTTTCC GATGCCTGCAACAAGGCGATTGCCTTCGGCAAGCCGCGCCTGATGCGCGACGACTGGAAAAAAGTCTTCGACCACGACGA GATCGCCGACAGCATCCGCCGCATCACCTGA
Upstream 100 bases:
>100_bases ATGTTGATATGCTGATGTACTCATCATACCATCACACCTCCTTGGCACTCTCAGCACTGAAGAGGGGTGCTCCCACTCAA TCGCAAACTGGAGCTTGGTA
Downstream 100 bases:
>100_bases GCATCCGCGTTCCCCGCCCGGCTGACGCCGCCATAGAAGCGGCGCGGCTGCATTCCTCTGGTTTCCCTTGCAAAACATAT TCATGGAGACAAACATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Semialdehyde Dehydrogenase NAD; NADP Oxidoreductase Co
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKTTIALFGAGGKMGVRLARNLQGSDYRVRHVEVGAVGRQRLKDELGVDCVSVDAALDGAGVVILAVPDTLIGKVAAEIS PKLQPGTMVITLDAAAPFAGHLPDRPDLVYFVAHPCHPPIFNDESTSEARRDFFGGAHAKQSIVSALMQGTDADFELGEA VAKVIYQPILRSYRLTVEQMALLEPGLSETVCATLLDVMREAMDEVVARGVPKDAARDFLLGHMTILGAVIFKEIPGQFS DACNKAIAFGKPRLMRDDWKKVFDHDEIADSIRRIT
Sequences:
>Translated_276_residues MKTTIALFGAGGKMGVRLARNLQGSDYRVRHVEVGAVGRQRLKDELGVDCVSVDAALDGAGVVILAVPDTLIGKVAAEIS PKLQPGTMVITLDAAAPFAGHLPDRPDLVYFVAHPCHPPIFNDESTSEARRDFFGGAHAKQSIVSALMQGTDADFELGEA VAKVIYQPILRSYRLTVEQMALLEPGLSETVCATLLDVMREAMDEVVARGVPKDAARDFLLGHMTILGAVIFKEIPGQFS DACNKAIAFGKPRLMRDDWKKVFDHDEIADSIRRIT >Mature_276_residues MKTTIALFGAGGKMGVRLARNLQGSDYRVRHVEVGAVGRQRLKDELGVDCVSVDAALDGAGVVILAVPDTLIGKVAAEIS PKLQPGTMVITLDAAAPFAGHLPDRPDLVYFVAHPCHPPIFNDESTSEARRDFFGGAHAKQSIVSALMQGTDADFELGEA VAKVIYQPILRSYRLTVEQMALLEPGLSETVCATLLDVMREAMDEVVARGVPKDAARDFLLGHMTILGAVIFKEIPGQFS DACNKAIAFGKPRLMRDDWKKVFDHDEIADSIRRIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29882; Mature: 29882
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTIALFGAGGKMGVRLARNLQGSDYRVRHVEVGAVGRQRLKDELGVDCVSVDAALDGA CCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHCCCEEEECCCCCCC GVVILAVPDTLIGKVAAEISPKLQPGTMVITLDAAAPFAGHLPDRPDLVYFVAHPCHPPI CEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC FNDESTSEARRDFFGGAHAKQSIVSALMQGTDADFELGEAVAKVIYQPILRSYRLTVEQM CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALLEPGLSETVCATLLDVMREAMDEVVARGVPKDAARDFLLGHMTILGAVIFKEIPGQFS HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH DACNKAIAFGKPRLMRDDWKKVFDHDEIADSIRRIT HHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure MKTTIALFGAGGKMGVRLARNLQGSDYRVRHVEVGAVGRQRLKDELGVDCVSVDAALDGA CCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHCCCEEEECCCCCCC GVVILAVPDTLIGKVAAEISPKLQPGTMVITLDAAAPFAGHLPDRPDLVYFVAHPCHPPI CEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCC FNDESTSEARRDFFGGAHAKQSIVSALMQGTDADFELGEAVAKVIYQPILRSYRLTVEQM CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALLEPGLSETVCATLLDVMREAMDEVVARGVPKDAARDFLLGHMTILGAVIFKEIPGQFS HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH DACNKAIAFGKPRLMRDDWKKVFDHDEIADSIRRIT HHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA