BacMap

Definition	Polaromonas sp. JS666 chromosome, complete genome.
Accession	NC_007948
Length	5,200,264

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The map label for this gene is gabD [H]

Identifier: 91785999

GI number: 91785999

Start: 88826

End: 90343

Strand: Direct

Name: gabD [H]

Synonym: Bpro_0086

Alternate gene names: 91785999

Gene position: 88826-90343 (Clockwise)

Preceding gene: 91785998

Following gene: 91786000

Centisome position: 1.71

GC content: 67.19

Gene sequence:

>1518_bases
ATGAGCACGCTGCGTCGAATTGCCGGACAATGTCCGTCCCCAGATACCTCCCAGATACCTTCTTGCCAGGACCCGAACCT
CATGACCTACCCCAACACCCAATTGTTCATCGCCGGCGAATGGCAGGAGGCAGCCGACGGCCGCAGCCTGGCCGTCTTCA
ATCCGGCCACCGGCAAGGAAATCGGCCGTGTGGCCCATGCGGCCAAAGTCGACCTGGACCGTGCCCTGGCGGCCGCGCAG
CAGGGGTTTGAAACCTGGCGCAAGGTTCCGGCGTTCGAGCGCAGCAAGATCATGCGCCGGGCGGCGGGCCTGATGCGCGA
ACGCGCCGGCGAGATCGCGGCGGTTTTGACGCAGGAGCAGGGCAAGCCCCTGGCCGAGGCCAAGGTCGAGGCCATGGCCG
CGGCCGACATCATCGAGTGGTTTGCCGAGGAAGGCTTTCGCGTCTATGGCCGCGTCGTGCCGTCGCGCAACCTGGCCACG
CGCCAGCTGGTGCTGAAGGACCCCGTCGGGCCGGTGGCCGCCTTCACCCCCTGGAACTTCCCGATCAACCAGGCGGTGCG
CAAGCTGTCGGCCGCGCTGGCCACGGGTTGCTCCATCATCGTCAAGGCGCCGGAGGAAACACCGGCCGGACCAGCCGCGC
TGATCCAGGCCTTTGCCGACGCGGGCATTCCGGCCGGCGTGATCGGCCTGGTGTACGGCAACCCGGCCGAAATCTCGGGC
TACCTGATCCCGCACCCGGTGATCCGCAAGATCACCTTCACCGGTTCCACCCCGGTGGGCAAGCAGCTCGCTGCCCTGGC
GGGCCAGCACATGAAGCGCGTGACGATGGAGCTGGGCGGTCACGCGCCCGTGATCGTGGCCGAAGACGCCGATGTCGAGC
TGGCGGTCAAGGCCGCCGGCGGCGCCAAGTTCCGCAACGCCGGGCAGGTGTGCATTTCGCCCACGCGCTTTCTGGTGCAT
GAAAGCATCCGCAACGACTTTGCGGCGGCACTGGTCAAGCACGCGCAAGGCCTCAAGGTCGGTGACGGCCTGGGCGAAGG
CATCCAGATGGGGCCGCTGGCCAACCCGCGCCGGTTGACGGCCATGGCCGAGTTCACACAGGACGCGGTACAGCGCGGCG
CCAAGGTGGCCGCGGGTGGCGAGCGCATCGGTGACTTGGGCAATTTCTGGGCGCCCACCGTGCTGACCGACGTGCCGCTG
GACGCCAAGGTGTTCAACGACGAGCCCTTCGGCCCCATGGCGGCCATCCGCAGCTTCAATACGCTGGACGAAGCCATCGC
CGAAGCCAACCGCTTGCCCTTTGGTCTGGCGGGCTACGCGTTCACGCGCTCACTGAAGAATGCGCACGCGCTGTCGCAGC
ACGTGGAGGTCGGCATGCTGTGGATCAACCAGCCCGCAGCGCCTTGGCCCGAGATGCCCTTTGGCGGCGTCAAGGATTCC
GGCTACGGCTCCGAAGGCGGGCCGGAAGCTTTGGAGGCCTACCTGAACACGCGGGCCGTGTCGATCATGAACGTTTGA

Upstream 100 bases:

>100_bases
AGTCGACGCCTCATGAGCCGACAGGGGATCACCGTGCTACCCGCGTTCTGCATGGCGCGTTGAACGCGAACAAGTGGCGC
GTGGTAGGACGATGAGGACG

Downstream 100 bases:

>100_bases
GCTCCATCGCGCCCCACACACTGACTTCTCTGGGGCGGCGCGGCTCACCGCCGCCCGGCACCGTAGCATTCATGGGTTCG
AGCACATGCTCGAGCAATGT

Product: 2,5-dioxopentanoate dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSTLRRIAGQCPSPDTSQIPSCQDPNLMTYPNTQLFIAGEWQEAADGRSLAVFNPATGKEIGRVAHAAKVDLDRALAAAQ
QGFETWRKVPAFERSKIMRRAAGLMRERAGEIAAVLTQEQGKPLAEAKVEAMAAADIIEWFAEEGFRVYGRVVPSRNLAT
RQLVLKDPVGPVAAFTPWNFPINQAVRKLSAALATGCSIIVKAPEETPAGPAALIQAFADAGIPAGVIGLVYGNPAEISG
YLIPHPVIRKITFTGSTPVGKQLAALAGQHMKRVTMELGGHAPVIVAEDADVELAVKAAGGAKFRNAGQVCISPTRFLVH
ESIRNDFAAALVKHAQGLKVGDGLGEGIQMGPLANPRRLTAMAEFTQDAVQRGAKVAAGGERIGDLGNFWAPTVLTDVPL
DAKVFNDEPFGPMAAIRSFNTLDEAIAEANRLPFGLAGYAFTRSLKNAHALSQHVEVGMLWINQPAAPWPEMPFGGVKDS
GYGSEGGPEALEAYLNTRAVSIMNV

Sequences:

>Translated_505_residues
MSTLRRIAGQCPSPDTSQIPSCQDPNLMTYPNTQLFIAGEWQEAADGRSLAVFNPATGKEIGRVAHAAKVDLDRALAAAQ
QGFETWRKVPAFERSKIMRRAAGLMRERAGEIAAVLTQEQGKPLAEAKVEAMAAADIIEWFAEEGFRVYGRVVPSRNLAT
RQLVLKDPVGPVAAFTPWNFPINQAVRKLSAALATGCSIIVKAPEETPAGPAALIQAFADAGIPAGVIGLVYGNPAEISG
YLIPHPVIRKITFTGSTPVGKQLAALAGQHMKRVTMELGGHAPVIVAEDADVELAVKAAGGAKFRNAGQVCISPTRFLVH
ESIRNDFAAALVKHAQGLKVGDGLGEGIQMGPLANPRRLTAMAEFTQDAVQRGAKVAAGGERIGDLGNFWAPTVLTDVPL
DAKVFNDEPFGPMAAIRSFNTLDEAIAEANRLPFGLAGYAFTRSLKNAHALSQHVEVGMLWINQPAAPWPEMPFGGVKDS
GYGSEGGPEALEAYLNTRAVSIMNV
>Mature_504_residues
STLRRIAGQCPSPDTSQIPSCQDPNLMTYPNTQLFIAGEWQEAADGRSLAVFNPATGKEIGRVAHAAKVDLDRALAAAQQ
GFETWRKVPAFERSKIMRRAAGLMRERAGEIAAVLTQEQGKPLAEAKVEAMAAADIIEWFAEEGFRVYGRVVPSRNLATR
QLVLKDPVGPVAAFTPWNFPINQAVRKLSAALATGCSIIVKAPEETPAGPAALIQAFADAGIPAGVIGLVYGNPAEISGY
LIPHPVIRKITFTGSTPVGKQLAALAGQHMKRVTMELGGHAPVIVAEDADVELAVKAAGGAKFRNAGQVCISPTRFLVHE
SIRNDFAAALVKHAQGLKVGDGLGEGIQMGPLANPRRLTAMAEFTQDAVQRGAKVAAGGERIGDLGNFWAPTVLTDVPLD
AKVFNDEPFGPMAAIRSFNTLDEAIAEANRLPFGLAGYAFTRSLKNAHALSQHVEVGMLWINQPAAPWPEMPFGGVKDSG
YGSEGGPEALEAYLNTRAVSIMNV

Specific function: Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=473, Percent_Identity=40.169133192389, Blast_Score=322, Evalue=7e-88,
Organism=Homo sapiens, GI25777721, Length=486, Percent_Identity=39.5061728395062, Blast_Score=314, Evalue=1e-85,
Organism=Homo sapiens, GI25777730, Length=480, Percent_Identity=35.4166666666667, Blast_Score=295, Evalue=6e-80,
Organism=Homo sapiens, GI153266822, Length=475, Percent_Identity=34.5263157894737, Blast_Score=294, Evalue=1e-79,
Organism=Homo sapiens, GI25777724, Length=484, Percent_Identity=34.0909090909091, Blast_Score=277, Evalue=1e-74,
Organism=Homo sapiens, GI21361176, Length=476, Percent_Identity=32.563025210084, Blast_Score=272, Evalue=5e-73,
Organism=Homo sapiens, GI238814322, Length=481, Percent_Identity=34.0956340956341, Blast_Score=270, Evalue=3e-72,
Organism=Homo sapiens, GI25777732, Length=475, Percent_Identity=33.0526315789474, Blast_Score=268, Evalue=9e-72,
Organism=Homo sapiens, GI115387104, Length=459, Percent_Identity=33.3333333333333, Blast_Score=263, Evalue=4e-70,
Organism=Homo sapiens, GI21614513, Length=481, Percent_Identity=33.4719334719335, Blast_Score=253, Evalue=4e-67,
Organism=Homo sapiens, GI25777726, Length=484, Percent_Identity=31.404958677686, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI12007648, Length=459, Percent_Identity=27.6688453159041, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI25777728, Length=414, Percent_Identity=32.8502415458937, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI11095441, Length=479, Percent_Identity=28.8100208768267, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI25952152, Length=451, Percent_Identity=26.1640798226164, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI188035924, Length=474, Percent_Identity=27.6371308016878, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI310128103, Length=467, Percent_Identity=27.8372591006424, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI310128093, Length=466, Percent_Identity=27.6824034334764, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI301500698, Length=284, Percent_Identity=27.8169014084507, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI310128091, Length=466, Percent_Identity=26.6094420600858, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI206597441, Length=446, Percent_Identity=26.9058295964126, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI206597439, Length=446, Percent_Identity=26.9058295964126, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI22907049, Length=446, Percent_Identity=26.9058295964126, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI4502043, Length=436, Percent_Identity=27.9816513761468, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI238814371, Length=436, Percent_Identity=27.9816513761468, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI73466520, Length=334, Percent_Identity=28.7425149700599, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI4557303, Length=334, Percent_Identity=28.7425149700599, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI73695881, Length=340, Percent_Identity=29.1176470588235, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI73695879, Length=340, Percent_Identity=29.1176470588235, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI71773324, Length=340, Percent_Identity=29.4117647058824, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI223972651, Length=463, Percent_Identity=24.8380129589633, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI310128089, Length=286, Percent_Identity=29.020979020979, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI310128097, Length=251, Percent_Identity=30.6772908366534, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI310128087, Length=287, Percent_Identity=28.2229965156794, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI310128095, Length=283, Percent_Identity=27.9151943462898, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI238859541, Length=465, Percent_Identity=24.7311827956989, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI25777736, Length=465, Percent_Identity=24.7311827956989, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI25777734, Length=465, Percent_Identity=24.7311827956989, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI223972653, Length=464, Percent_Identity=21.7672413793103, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI310128101, Length=241, Percent_Identity=25.7261410788382, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI310128099, Length=234, Percent_Identity=26.4957264957265, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1789015, Length=480, Percent_Identity=40.625, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1786504, Length=478, Percent_Identity=35.7740585774059, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1787684, Length=471, Percent_Identity=32.9087048832272, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1787558, Length=487, Percent_Identity=34.4969199178645, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI87081896, Length=477, Percent_Identity=32.7044025157233, Blast_Score=252, Evalue=4e-68,
Organism=Escherichia coli, GI87081926, Length=448, Percent_Identity=33.4821428571429, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI87082295, Length=485, Percent_Identity=31.5463917525773, Blast_Score=219, Evalue=4e-58,
Organism=Escherichia coli, GI1787715, Length=473, Percent_Identity=31.2896405919662, Blast_Score=218, Evalue=8e-58,
Organism=Escherichia coli, GI1788042, Length=460, Percent_Identity=28.9130434782609, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787250, Length=484, Percent_Identity=28.7190082644628, Blast_Score=135, Evalue=8e-33,
Organism=Escherichia coli, GI1787653, Length=407, Percent_Identity=25.5528255528256, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17534119, Length=468, Percent_Identity=38.6752136752137, Blast_Score=332, Evalue=4e-91,
Organism=Caenorhabditis elegans, GI133930964, Length=499, Percent_Identity=34.2685370741483, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI25143876, Length=491, Percent_Identity=33.4012219959267, Blast_Score=274, Evalue=9e-74,
Organism=Caenorhabditis elegans, GI25143874, Length=491, Percent_Identity=33.4012219959267, Blast_Score=273, Evalue=1e-73,
Organism=Caenorhabditis elegans, GI17562198, Length=477, Percent_Identity=31.6561844863732, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI25144435, Length=478, Percent_Identity=31.1715481171548, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI71995606, Length=479, Percent_Identity=31.3152400835073, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17551164, Length=490, Percent_Identity=29.3877551020408, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI32564736, Length=419, Percent_Identity=30.3102625298329, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71995613, Length=419, Percent_Identity=31.5035799522673, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI71986308, Length=481, Percent_Identity=27.2349272349272, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI115534176, Length=485, Percent_Identity=28.0412371134021, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI32566756, Length=348, Percent_Identity=28.1609195402299, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25146391, Length=348, Percent_Identity=28.1609195402299, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25146394, Length=348, Percent_Identity=28.1609195402299, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17564084, Length=339, Percent_Identity=28.023598820059, Blast_Score=131, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17534447, Length=475, Percent_Identity=23.3684210526316, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32564151, Length=433, Percent_Identity=23.094688221709, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115532534, Length=395, Percent_Identity=22.0253164556962, Blast_Score=75, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=489, Percent_Identity=36.40081799591, Blast_Score=332, Evalue=9e-92,
Organism=Saccharomyces cerevisiae, GI6320917, Length=481, Percent_Identity=34.3035343035343, Blast_Score=280, Evalue=4e-76,
Organism=Saccharomyces cerevisiae, GI6325196, Length=493, Percent_Identity=31.6430020283976, Blast_Score=256, Evalue=5e-69,
Organism=Saccharomyces cerevisiae, GI6324950, Length=479, Percent_Identity=30.8977035490605, Blast_Score=252, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6323821, Length=488, Percent_Identity=31.7622950819672, Blast_Score=249, Evalue=9e-67,
Organism=Saccharomyces cerevisiae, GI6323822, Length=484, Percent_Identity=32.6446280991736, Blast_Score=242, Evalue=9e-65,
Organism=Saccharomyces cerevisiae, GI6321828, Length=476, Percent_Identity=26.2605042016807, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6321826, Length=501, Percent_Identity=24.1516966067864, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6323757, Length=332, Percent_Identity=26.8072289156627, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281362580, Length=494, Percent_Identity=38.4615384615385, Blast_Score=370, Evalue=1e-102,
Organism=Drosophila melanogaster, GI62472918, Length=494, Percent_Identity=38.4615384615385, Blast_Score=370, Evalue=1e-102,
Organism=Drosophila melanogaster, GI62472926, Length=494, Percent_Identity=38.4615384615385, Blast_Score=370, Evalue=1e-102,
Organism=Drosophila melanogaster, GI62472936, Length=494, Percent_Identity=38.4615384615385, Blast_Score=370, Evalue=1e-102,
Organism=Drosophila melanogaster, GI21356737, Length=494, Percent_Identity=38.4615384615385, Blast_Score=370, Evalue=1e-102,
Organism=Drosophila melanogaster, GI24650465, Length=474, Percent_Identity=36.7088607594937, Blast_Score=323, Evalue=1e-88,
Organism=Drosophila melanogaster, GI24585660, Length=479, Percent_Identity=31.9415448851775, Blast_Score=269, Evalue=4e-72,
Organism=Drosophila melanogaster, GI20129399, Length=497, Percent_Identity=33.1991951710262, Blast_Score=259, Evalue=4e-69,
Organism=Drosophila melanogaster, GI24638878, Length=481, Percent_Identity=29.3139293139293, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24638876, Length=481, Percent_Identity=29.3139293139293, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24666674, Length=478, Percent_Identity=28.0334728033473, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI281360301, Length=437, Percent_Identity=25.629290617849, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI281360299, Length=437, Percent_Identity=25.629290617849, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281360297, Length=437, Percent_Identity=25.629290617849, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281360295, Length=437, Percent_Identity=25.629290617849, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24586250, Length=437, Percent_Identity=25.629290617849, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI45552499, Length=437, Percent_Identity=25.629290617849, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI281360303, Length=437, Percent_Identity=25.629290617849, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668425, Length=465, Percent_Identity=23.4408602150538, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24668417, Length=465, Percent_Identity=23.4408602150538, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24668413, Length=465, Percent_Identity=23.4408602150538, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28571802, Length=453, Percent_Identity=26.0485651214128, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI28571800, Length=453, Percent_Identity=26.0485651214128, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI28571806, Length=453, Percent_Identity=26.0485651214128, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI28571798, Length=453, Percent_Identity=26.0485651214128, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI28571796, Length=453, Percent_Identity=26.0485651214128, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI28571794, Length=453, Percent_Identity=26.0485651214128, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI281360293, Length=257, Percent_Identity=25.6809338521401, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28574525, Length=457, Percent_Identity=24.507658643326, Blast_Score=83, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 53624; Mature: 53493

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLRRIAGQCPSPDTSQIPSCQDPNLMTYPNTQLFIAGEWQEAADGRSLAVFNPATGKE
CCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCHHHCCCCEEEEECCCCCHH
IGRVAHAAKVDLDRALAAAQQGFETWRKVPAFERSKIMRRAAGLMRERAGEIAAVLTQEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKPLAEAKVEAMAAADIIEWFAEEGFRVYGRVVPSRNLATRQLVLKDPVGPVAAFTPWNF
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHEEEECCCCCCEECCCCCC
PINQAVRKLSAALATGCSIIVKAPEETPAGPAALIQAFADAGIPAGVIGLVYGNPAEISG
CHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHCCC
YLIPHPVIRKITFTGSTPVGKQLAALAGQHMKRVTMELGGHAPVIVAEDADVELAVKAAG
EECCCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECC
GAKFRNAGQVCISPTRFLVHESIRNDFAAALVKHAQGLKVGDGLGEGIQMGPLANPRRLT
CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
AMAEFTQDAVQRGAKVAAGGERIGDLGNFWAPTVLTDVPLDAKVFNDEPFGPMAAIRSFN
HHHHHHHHHHHCCCEECCCCHHHHHCCCCCCCHHHCCCCCCCEECCCCCCCHHHHHHHHH
TLDEAIAEANRLPFGLAGYAFTRSLKNAHALSQHVEVGMLWINQPAAPWPEMPFGGVKDS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCC
GYGSEGGPEALEAYLNTRAVSIMNV
CCCCCCCHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
STLRRIAGQCPSPDTSQIPSCQDPNLMTYPNTQLFIAGEWQEAADGRSLAVFNPATGKE
CHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCHHHCCCCEEEEECCCCCHH
IGRVAHAAKVDLDRALAAAQQGFETWRKVPAFERSKIMRRAAGLMRERAGEIAAVLTQEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKPLAEAKVEAMAAADIIEWFAEEGFRVYGRVVPSRNLATRQLVLKDPVGPVAAFTPWNF
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHEEEECCCCCCEECCCCCC
PINQAVRKLSAALATGCSIIVKAPEETPAGPAALIQAFADAGIPAGVIGLVYGNPAEISG
CHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHCCC
YLIPHPVIRKITFTGSTPVGKQLAALAGQHMKRVTMELGGHAPVIVAEDADVELAVKAAG
EECCCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECC
GAKFRNAGQVCISPTRFLVHESIRNDFAAALVKHAQGLKVGDGLGEGIQMGPLANPRRLT
CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
AMAEFTQDAVQRGAKVAAGGERIGDLGNFWAPTVLTDVPLDAKVFNDEPFGPMAAIRSFN
HHHHHHHHHHHCCCEECCCCHHHHHCCCCCCCHHHCCCCCCCEECCCCCCCHHHHHHHHH
TLDEAIAEANRLPFGLAGYAFTRSLKNAHALSQHVEVGMLWINQPAAPWPEMPFGGVKDS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCC
GYGSEGGPEALEAYLNTRAVSIMNV
CCCCCCCHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]