Click here to switch to the map view.

The map label for this gene is yiaO [C]

Identifier: 91786001

GI number: 91786001

Start: 91762

End: 92757

Strand: Direct

Name: yiaO [C]

Synonym: Bpro_0088

Alternate gene names: 91786001

Gene position: 91762-92757 (Clockwise)

Preceding gene: 91786000

Following gene: 91786002

Centisome position: 1.76

GC content: 62.45

Gene sequence:

>996_bases
ATGACCCCACGTTCCCGCTCTTCCCGCTCTTCCCGCGCGGTACTCGCCGCCTCTGCACTCCTGATGGCGCTGGCCGGCAC
GGCCAGCGCCCAGACCATCCTGAAGATCGGCTACACGCCGCCCAAGGACTCGCATTACGGCGTGGGCGCCACGACGTTCT
GCGACGAAGTGGAGAAGGGCACGCAAGAGCGTTACAAGTGCCAGCATTTCCCCAGTTCGGCGCTGGGTGGCGAGCGCGAG
ATGATCGAATCGGTGCAGCTCGGCACTCAGGATCTGGTCAATACCTCGACCGGCCCGCTGGGCAACTTCGTGCCCGAGAC
CCGTATCGTGGACATTCCCTTCCTGTTCCGCGACTACGAGCACGCCCGCAAGGTGATGGATGGTGCGATCGGCCAGGACC
TGCTGAAAAAGATGCAGGCCAAGGGCCTGATCGGCCTGGCATGGACAGAAAACGGCTTTCGCCACATGACGAACAGCAAG
CGGCCTATCCTGCAGGCGAGTGATGCGGCCGGCCTGAAGGTTCGCACCATGGAGAACAAGGTCCACATGGACGGCTACAA
GACCTTCGGCCTGCTGCCTACACCGATGGCCTTTCCGGAACTGTTCACGGCGCTGCAGCAGGGCACGGTGGACGGCCAGG
AGAACCCGATACCGGTGATCCTTTCGTCCAAGTTCTCGCAGGTCCAGAAACACCTCTCGCTGACGGGCCATGTCTATTCA
CCAGCGGTGCTGATCCTGTCGTCCAGGGTCTGGGACAAGCTGTCCGAGGCCGATAAAAAGGTCTTCGTTGCGGCGGCGCA
GAAAGCCACGGTCGCGCAGCGCAAACGCGTCAACGACGACGAGGCCAACGGCATCACCCAGCTGAAGAAGGACGGCATGC
AGGTGGTTGAAAAGGTCGACGGAGAAAGTTTCCGCAAGGCCGTGGCGCCTGCCTACGCCGGCTTCGCCAAGGAGTTCGGT
GCCGAGCGCATCGCCGCCATCCAGGCCGTGAAATAA

Upstream 100 bases:

>100_bases
ACCTGAGCATCCGCGTTCCCCGCCCGGCTGACGCCGCCATAGAAGCGGCGCGGCTGCATTCCTCTGGTTTCCCTTGCAAA
ACATATTCATGGAGACAAAC

Downstream 100 bases:

>100_bases
GCATGACGCCTCCGTCAGCTCCTGGCCTGGCGATGCCTCTGGCAAGCCAGGGCCGGGCGGCCGGCATCACCGCGGCCCTG
CGGGCGGGTGTGCTCGCCCT

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTPRSRSSRSSRAVLAASALLMALAGTASAQTILKIGYTPPKDSHYGVGATTFCDEVEKGTQERYKCQHFPSSALGGERE
MIESVQLGTQDLVNTSTGPLGNFVPETRIVDIPFLFRDYEHARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSK
RPILQASDAAGLKVRTMENKVHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGHVYS
PAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDEANGITQLKKDGMQVVEKVDGESFRKAVAPAYAGFAKEFG
AERIAAIQAVK

Sequences:

>Translated_331_residues
MTPRSRSSRSSRAVLAASALLMALAGTASAQTILKIGYTPPKDSHYGVGATTFCDEVEKGTQERYKCQHFPSSALGGERE
MIESVQLGTQDLVNTSTGPLGNFVPETRIVDIPFLFRDYEHARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSK
RPILQASDAAGLKVRTMENKVHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGHVYS
PAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDEANGITQLKKDGMQVVEKVDGESFRKAVAPAYAGFAKEFG
AERIAAIQAVK
>Mature_330_residues
TPRSRSSRSSRAVLAASALLMALAGTASAQTILKIGYTPPKDSHYGVGATTFCDEVEKGTQERYKCQHFPSSALGGEREM
IESVQLGTQDLVNTSTGPLGNFVPETRIVDIPFLFRDYEHARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSKR
PILQASDAAGLKVRTMENKVHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGHVYSP
AVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDEANGITQLKKDGMQVVEKVDGESFRKAVAPAYAGFAKEFGA
ERIAAIQAVK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=314, Percent_Identity=35.9872611464968, Blast_Score=209, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36059; Mature: 35928

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRSRSSRSSRAVLAASALLMALAGTASAQTILKIGYTPPKDSHYGVGATTFCDEVEKG
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHH
TQERYKCQHFPSSALGGEREMIESVQLGTQDLVNTSTGPLGNFVPETRIVDIPFLFRDYE
HHHHHHHHCCCCHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHH
HARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSKRPILQASDAAGLKVRTMENK
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCEEECCCCCEEEEEECCE
VHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGHVYS
EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHH
PAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDEANGITQLKKDGMQVVEKVD
HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHC
GESFRKAVAPAYAGFAKEFGAERIAAIQAVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPRSRSSRSSRAVLAASALLMALAGTASAQTILKIGYTPPKDSHYGVGATTFCDEVEKG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHH
TQERYKCQHFPSSALGGEREMIESVQLGTQDLVNTSTGPLGNFVPETRIVDIPFLFRDYE
HHHHHHHHCCCCHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHH
HARKVMDGAIGQDLLKKMQAKGLIGLAWTENGFRHMTNSKRPILQASDAAGLKVRTMENK
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCEEECCCCCEEEEEECCE
VHMDGYKTFGLLPTPMAFPELFTALQQGTVDGQENPIPVILSSKFSQVQKHLSLTGHVYS
EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHH
PAVLILSSRVWDKLSEADKKVFVAAAQKATVAQRKRVNDDEANGITQLKKDGMQVVEKVD
HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHC
GESFRKAVAPAYAGFAKEFGAERIAAIQAVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]