| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785946
Identifier: 91785946
GI number: 91785946
Start: 34346
End: 34885
Strand: Reverse
Name: 91785946
Synonym: Bpro_0033
Alternate gene names: NA
Gene position: 34885-34346 (Counterclockwise)
Preceding gene: 91785947
Following gene: 91785945
Centisome position: 0.67
GC content: 62.59
Gene sequence:
>540_bases ATGAGCAAATTCTTTGGCGAGATCCGCCAGCTGGGCTACGTCGTGCACGACATCGAAGCGGCCATGGACTACTGGAGCAA CACCCTGGGTGTCGGCCCCTGGTTTTACAACCCCAAGGTGCCCATCAAAAACTACAGCTACAAGGGTGAATCGCACGAGC CGCACAACTCGGTGGCGCTGGCCAATTCGGGTTTTGTGCAGGTCGAGCTGATCCAGACCCGCAACGACGTGCCCTCGATG TACCGCGACTTCCTGCAGGCAGGCCGCACCGGCCTGCAGCATGTGGCCTACTGGACCAGCGACTACGACGCCGACCTGGC GCGCCTGCTCGGGCAAGGCTTCAAACCGGTGATGAGCGGCGAAGTCGGCGAGAAAGGCCGCTTCATTTATTTCGACACCG AATACCACCCCGGCACCGTCATCGAGCTGTCCGAAGTGGCCGGCCCCAAGGGCCGGATGTTCGACCTGATCCGCGCCTCG TCCGAGGGCTGGGATGGCCGCGAGCCGGTGCGCCCCTTTCCCGACCTGAGCAAACTCTGA
Upstream 100 bases:
>100_bases ATCGTGGTCGCGGCCATTCCCTGGTTCTCCACCGGCTTCCTCAAAAACTAAATCCGGCACCAAAACTTCCCACCTCCCCC TTTCACTGGAGCGACAACAC
Downstream 100 bases:
>100_bases AGCGCGCCGACATGAATGCCGACCGCTTTGAAGCCACCTACCTGATCGAGACCCCGCTCGAGCCCGCCCGGGTTGCCGAG GTGATGGCCGGCGAGCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSKFFGEIRQLGYVVHDIEAAMDYWSNTLGVGPWFYNPKVPIKNYSYKGESHEPHNSVALANSGFVQVELIQTRNDVPSM YRDFLQAGRTGLQHVAYWTSDYDADLARLLGQGFKPVMSGEVGEKGRFIYFDTEYHPGTVIELSEVAGPKGRMFDLIRAS SEGWDGREPVRPFPDLSKL
Sequences:
>Translated_179_residues MSKFFGEIRQLGYVVHDIEAAMDYWSNTLGVGPWFYNPKVPIKNYSYKGESHEPHNSVALANSGFVQVELIQTRNDVPSM YRDFLQAGRTGLQHVAYWTSDYDADLARLLGQGFKPVMSGEVGEKGRFIYFDTEYHPGTVIELSEVAGPKGRMFDLIRAS SEGWDGREPVRPFPDLSKL >Mature_178_residues SKFFGEIRQLGYVVHDIEAAMDYWSNTLGVGPWFYNPKVPIKNYSYKGESHEPHNSVALANSGFVQVELIQTRNDVPSMY RDFLQAGRTGLQHVAYWTSDYDADLARLLGQGFKPVMSGEVGEKGRFIYFDTEYHPGTVIELSEVAGPKGRMFDLIRASS EGWDGREPVRPFPDLSKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20260; Mature: 20129
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFFGEIRQLGYVVHDIEAAMDYWSNTLGVGPWFYNPKVPIKNYSYKGESHEPHNSVAL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE ANSGFVQVELIQTRNDVPSMYRDFLQAGRTGLQHVAYWTSDYDADLARLLGQGFKPVMSG ECCCEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHCC EVGEKGRFIYFDTEYHPGTVIELSEVAGPKGRMFDLIRASSEGWDGREPVRPFPDLSKL CCCCCCCEEEEECCCCCCCEEEHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKFFGEIRQLGYVVHDIEAAMDYWSNTLGVGPWFYNPKVPIKNYSYKGESHEPHNSVAL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE ANSGFVQVELIQTRNDVPSMYRDFLQAGRTGLQHVAYWTSDYDADLARLLGQGFKPVMSG ECCCEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHCC EVGEKGRFIYFDTEYHPGTVIELSEVAGPKGRMFDLIRASSEGWDGREPVRPFPDLSKL CCCCCCCEEEEECCCCCCCEEEHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA