| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898584
Identifier: 89898584
GI number: 89898584
Start: 920571
End: 921353
Strand: Direct
Name: 89898584
Synonym: CF0777
Alternate gene names: NA
Gene position: 920571-921353 (Clockwise)
Preceding gene: 89898583
Following gene: 89898585
Centisome position: 78.94
GC content: 41.63
Gene sequence:
>783_bases ATGTCTGACAAACTCGAAAGACGTATAACTTTGGGATGCGTAAGCTATATCAATGCTTTTCCTTTTTCTTTGGAGCTTGC AAAAAGAGAGGACATTCTTCTTCATACAGCCCCTCCAGCAAATTTACTTGGCAAGCTTCTCGATGGAAGTTTACAATTTG CTCTCACCTCTGCCGCGGGGCTATTAACTCATCCTTTTGGGAAAATTCCAGGATTTGGCATAGCAGCTTATAAAAAAATT CTCAGCGTAAATCTTTACGCTGCATCGACATTCTTCACTTCTGAGAAACTTCGCATTGCGGCAACAAAAGAAAGCCGCTC CTCGGTAATGCTCTTGGACATTCTTTGTCGTCATTTGTGGAACACCTCTATCCCAGAAATTATCCAACTTCCTGCTGATG AAGTTATAGAGAAAGCAGGAAATTACGATGGGCTACTCTTAATAGGGGATAAAGCTTTACATCATCCTCATATTCCTGGA TTTGCCACATATGATCTTGCCCAAGGGTGGTATGAACTTACCCAACTTCCTTTTGTTTTCGCTGTTGTTCTTTCTAATAA TCCTCAGGGAAGTGATGTTGTACAATCCGCATTAGAGAGTTCGCTACACTATTTCGAAACTCATCCTGAAGCTTGTATAG AAAGGGCTAAGGAACGCTCTCAGCTTCCCCAAGATCTTATTCAGGAGTACTACTCTCTATGCCGTTATCGTCTAAGAGAA GAAGACTATGCAGGACTTGAGAAATTCCGAGAATATTATGCCACCATCTATCAACGAGCCTAA
Upstream 100 bases:
>100_bases ATATCGGAGAAAAGGTGTTTCAAATGGCCTCTTCAAATCAAAGTATAAAAATGGATATTGAGGGAATGGCAAGCCTCATT AAAAAACAAGGGCGCATACC
Downstream 100 bases:
>100_bases TCTTCAGGAGATGTTTGATTCCTTAGCTCCTAAATACGATAGGATAAACTCTATCCTATCTCTAGGCATGCATCATTTAT GGAATCGTACGTTTGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSDKLERRITLGCVSYINAFPFSLELAKREDILLHTAPPANLLGKLLDGSLQFALTSAAGLLTHPFGKIPGFGIAAYKKI LSVNLYAASTFFTSEKLRIAATKESRSSVMLLDILCRHLWNTSIPEIIQLPADEVIEKAGNYDGLLLIGDKALHHPHIPG FATYDLAQGWYELTQLPFVFAVVLSNNPQGSDVVQSALESSLHYFETHPEACIERAKERSQLPQDLIQEYYSLCRYRLRE EDYAGLEKFREYYATIYQRA
Sequences:
>Translated_260_residues MSDKLERRITLGCVSYINAFPFSLELAKREDILLHTAPPANLLGKLLDGSLQFALTSAAGLLTHPFGKIPGFGIAAYKKI LSVNLYAASTFFTSEKLRIAATKESRSSVMLLDILCRHLWNTSIPEIIQLPADEVIEKAGNYDGLLLIGDKALHHPHIPG FATYDLAQGWYELTQLPFVFAVVLSNNPQGSDVVQSALESSLHYFETHPEACIERAKERSQLPQDLIQEYYSLCRYRLRE EDYAGLEKFREYYATIYQRA >Mature_259_residues SDKLERRITLGCVSYINAFPFSLELAKREDILLHTAPPANLLGKLLDGSLQFALTSAAGLLTHPFGKIPGFGIAAYKKIL SVNLYAASTFFTSEKLRIAATKESRSSVMLLDILCRHLWNTSIPEIIQLPADEVIEKAGNYDGLLLIGDKALHHPHIPGF ATYDLAQGWYELTQLPFVFAVVLSNNPQGSDVVQSALESSLHYFETHPEACIERAKERSQLPQDLIQEYYSLCRYRLREE DYAGLEKFREYYATIYQRA
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29290; Mature: 29159
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKLERRITLGCVSYINAFPFSLELAKREDILLHTAPPANLLGKLLDGSLQFALTSAAG CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHH LLTHPFGKIPGFGIAAYKKILSVNLYAASTFFTSEKLRIAATKESRSSVMLLDILCRHLW HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHC NTSIPEIIQLPADEVIEKAGNYDGLLLIGDKALHHPHIPGFATYDLAQGWYELTQLPFVF CCCCHHHHHCCHHHHHHHCCCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AVVLSNNPQGSDVVQSALESSLHYFETHPEACIERAKERSQLPQDLIQEYYSLCRYRLRE HHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC EDYAGLEKFREYYATIYQRA CHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDKLERRITLGCVSYINAFPFSLELAKREDILLHTAPPANLLGKLLDGSLQFALTSAAG CCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHH LLTHPFGKIPGFGIAAYKKILSVNLYAASTFFTSEKLRIAATKESRSSVMLLDILCRHLW HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHC NTSIPEIIQLPADEVIEKAGNYDGLLLIGDKALHHPHIPGFATYDLAQGWYELTQLPFVF CCCCHHHHHCCHHHHHHHCCCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AVVLSNNPQGSDVVQSALESSLHYFETHPEACIERAKERSQLPQDLIQEYYSLCRYRLRE HHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC EDYAGLEKFREYYATIYQRA CHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA