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The map label for this gene is omp12 [H]

Identifier: 89898527

GI number: 89898527

Start: 831128

End: 831979

Strand: Direct

Name: omp12 [H]

Synonym: CF0720

Alternate gene names: 89898527

Gene position: 831128-831979 (Clockwise)

Preceding gene: 89898526

Following gene: 89898528

Centisome position: 71.27

GC content: 40.02

Gene sequence:

>852_bases
ATATCTAACTTCTTCCACAGAGACGCTACAAAATTACAAAAAGGATTCCGCCATATAAGCTCCGGATATGTTGTGGGTGC
AAGCACTCAACCTATCTCTGATAAAGTTGTGGATTTTGCTTTCTGTCAAATGTTTGGAAAATCTAAGGACTACCATCTTA
CAGAGTTGTCCTCTCATATCTATGCAGCATCTGTGCACACAAAATATGAAAAGCTACTCCATCGTTTTAAGTTCTCAAAT
AAGAAAGGATTTATCCTTACCAAACTTCCTGAACAAATCCCTGTAATCCTTGATGCGCAGCTTAGTTACAGCTCAAGTCG
TAACTCTATGACGACAAAACATGCTCCAAATCCTTCATCAAGAGGAAAATGGAACAACCATTGCGTTGCTGGTGAAGTTG
GTGGCTATGTTCCGATGGTTATTGACAATCCCATGCTTGATGAGTTCTCCCCATTCATGAAACTTTGTCTTGTGTTCGTC
CAACAAGAAGATTTCAAAGAAACAAAAGGAGGAGATGAAAATAGAAACTTCCAAAGTGCGCACTTTGTCAACCTTTCCCT
ACCTATCGGCGTGAAGTTTGAAAAAACAAACAAGTACAACATTTACAATGTCAGCCTTGTTTATCAACCAGATATCTATC
GTGATGCTCCGAAATCTCGAGTATTCCTCCCCTCAAAAGATACTACGTGGTCTACAGGAGCAACAAACTTAGCCCGACAA
GCTTTGATACTCGATGGTTCTAACCATCACCATCTCACAGATAGTTTCGAAGTCTTTTGTCATGGAGCTTTTGAACTGCG
CGGGTCATCTAGAAATTACAACATTGACCTAGGAGGTAAGTACAAATTCTAA

Upstream 100 bases:

>100_bases
CAGCTTATGGTGTTCAGCTATTGACATGCGCGCTATTCAGAATCTTGTTGAGGTTAGCGCGCAAAACTAAGCTCCTCGCA
AAGGACTCTGGACTTCTGGA

Downstream 100 bases:

>100_bases
AAATCCGCTTTCTATAAGACGGCAGGGCCTTTTATCAAAAATGAAAAAAACACGTCAAGTCTTTTCTATATTCGACTTGC
TTTCTTTTGTACCAATGAGT

Product: outer membrane protein

Products: NA

Alternate protein names: Outer membrane protein 11; Polymorphic membrane protein 8 [H]

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSNFFHRDATKLQKGFRHISSGYVVGASTQPISDKVVDFAFCQMFGKSKDYHLTELSSHIYAASVHTKYEKLLHRFKFSN
KKGFILTKLPEQIPVILDAQLSYSSSRNSMTTKHAPNPSSRGKWNNHCVAGEVGGYVPMVIDNPMLDEFSPFMKLCLVFV
QQEDFKETKGGDENRNFQSAHFVNLSLPIGVKFEKTNKYNIYNVSLVYQPDIYRDAPKSRVFLPSKDTTWSTGATNLARQ
ALILDGSNHHHLTDSFEVFCHGAFELRGSSRNYNIDLGGKYKF

Sequences:

>Translated_283_residues
MSNFFHRDATKLQKGFRHISSGYVVGASTQPISDKVVDFAFCQMFGKSKDYHLTELSSHIYAASVHTKYEKLLHRFKFSN
KKGFILTKLPEQIPVILDAQLSYSSSRNSMTTKHAPNPSSRGKWNNHCVAGEVGGYVPMVIDNPMLDEFSPFMKLCLVFV
QQEDFKETKGGDENRNFQSAHFVNLSLPIGVKFEKTNKYNIYNVSLVYQPDIYRDAPKSRVFLPSKDTTWSTGATNLARQ
ALILDGSNHHHLTDSFEVFCHGAFELRGSSRNYNIDLGGKYKF
>Mature_282_residues
SNFFHRDATKLQKGFRHISSGYVVGASTQPISDKVVDFAFCQMFGKSKDYHLTELSSHIYAASVHTKYEKLLHRFKFSNK
KGFILTKLPEQIPVILDAQLSYSSSRNSMTTKHAPNPSSRGKWNNHCVAGEVGGYVPMVIDNPMLDEFSPFMKLCLVFVQ
QEDFKETKGGDENRNFQSAHFVNLSLPIGVKFEKTNKYNIYNVSLVYQPDIYRDAPKSRVFLPSKDTTWSTGATNLARQA
LILDGSNHHHLTDSFEVFCHGAFELRGSSRNYNIDLGGKYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR006315
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 32129; Mature: 31998

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFFHRDATKLQKGFRHISSGYVVGASTQPISDKVVDFAFCQMFGKSKDYHLTELSSHI
CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCE
YAASVHTKYEKLLHRFKFSNKKGFILTKLPEQIPVILDAQLSYSSSRNSMTTKHAPNPSS
EEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
RGKWNNHCVAGEVGGYVPMVIDNPMLDEFSPFMKLCLVFVQQEDFKETKGGDENRNFQSA
CCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
HFVNLSLPIGVKFEKTNKYNIYNVSLVYQPDIYRDAPKSRVFLPSKDTTWSTGATNLARQ
EEEEEECCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHE
ALILDGSNHHHLTDSFEVFCHGAFELRGSSRNYNIDLGGKYKF
EEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCEECC
>Mature Secondary Structure 
SNFFHRDATKLQKGFRHISSGYVVGASTQPISDKVVDFAFCQMFGKSKDYHLTELSSHI
CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCE
YAASVHTKYEKLLHRFKFSNKKGFILTKLPEQIPVILDAQLSYSSSRNSMTTKHAPNPSS
EEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
RGKWNNHCVAGEVGGYVPMVIDNPMLDEFSPFMKLCLVFVQQEDFKETKGGDENRNFQSA
CCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
HFVNLSLPIGVKFEKTNKYNIYNVSLVYQPDIYRDAPKSRVFLPSKDTTWSTGATNLARQ
EEEEEECCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHE
ALILDGSNHHHLTDSFEVFCHGAFELRGSSRNYNIDLGGKYKF
EEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10539856; 10192388; 10684935; 10871362 [H]