| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is omp11 [H]
Identifier: 89898526
GI number: 89898526
Start: 828635
End: 831097
Strand: Direct
Name: omp11 [H]
Synonym: CF0719
Alternate gene names: 89898526
Gene position: 828635-831097 (Clockwise)
Preceding gene: 89898525
Following gene: 89898527
Centisome position: 71.05
GC content: 42.92
Gene sequence:
>2463_bases ATTAACAATAGTGCGGGATCTGAGTTAACATTTTCAGGATTTAGCAATTTAACCTTCTCCAGTGCCACAAGTCAAACTCA AGATAAAGCAGACAGTGCTATCTATGTAGGGCCTAAAACCACAGTAACTCCTCCCATCCCGCCTCCAGCAAACTCGGAAG CAAGTGGTGGATCACAAGATTCTTCGAGTGAAAATACAGAACCTAAAGGCGAAGAAAATCAAAGTGAAGATCGGGGATCA GAGTCCAAAGTTAACGGTGGTGAATCAACAACCACCGTTGTAGAACCAGCAGCTTCAGCGACCCTCTGGAGAATAACTTC TGATACATCTGTGGCAAATGCTGACGTTAGCGACAACCCCAGTACAACAGGAGTTAATTCCGCAGGCAATTCAGTTCATC CTGAAATCAAAGTAGGAAAAGATGCTGGAGAAAACAGCATTTCCGAGGAAAAAACTAAAGAGGCTTCTGCCCCTGCCACT ACTAGCCCAAGCATTACTTTCAAAGACAACGTTGATATTACATTTGAGAATAACTCCTCTAAGAAAGCTGGCGGAGCTAT TAATGTTAATGGTGGAACAGGAAAAATAGAAAACAACACCGGGACATGCACTTTCTCCAAAAATAATGCTAAGGAACAAG GTGGTGCTATATCTATTACAGGTAATTTCGATATTACCGGTAACAAAACCGTCGTCTTTTCTGGGAACAAAGCTCAAGTC ATTTCCTCTCCAGCACAAGAAACGGAAGGAAAGGCAGCTGAAGTTACGGAGCAAGAAGTCCCGGCAGTCACAACAGGAAC TGGGGGTGCTATCCATTATTTAGCTGCCCCAACTACTTCTGAACCTGGAATTTCGGGTCAGCCCTCTGGTCAAACTGAAA TTCCTTCTTCTTCTGTACAGGCTATATTGTTATCAGCAGATATCCCAGCACCTACTCCTGTAAAAAAACAACAAGAACCG GCTCCTGCAGAGGATCCATGTTTAACGATCTCTGGTAGTACTTCAGTGACATTTACGAATAACTCCTCTACTACTAGTGG TGGGGCTATTCACGCTAAAAAATTAGTTCTATCTTCTGGTGGAGACATCACCTTCTCTAATAACTCCTCAGGAAAAGGCG GAGCTATTTTCATTACCGATGGCGGAGATATCAGCATCACAGCTGAAACAGGATCGATTACCTTCCAAGGAAACACCGTT ACATCTGCCGATGACATTATCCTTCCCAGTAAAACTCCAGAAACTGGTGAGAAAGCAAATAAAGAACAACCTAATGCTGC TCTTGCTCTAATTGCATCTAAGGCTAGTGCTAAAGCTGTCGCAGCCAATCAAAATCAAAAGCCTACACACAATGCCATTC ATTTAGGCAGCGGAGCTAAAATTTCCCAATTACGCGCTGGAACAGGTCAAACGATCTTTTTCTATGATCCTATTACAATG GCAACAGCAAGTTCATCAAGTCAATCTCCTGCTAAACCTTCTATCCCAGATTCTTCAATAAGAGCTGCTGCTGTTTCTGC ACCAGCACCCGCAGTAACTCCTAAAACTCCACTAAAAATCAACGCTTCAGATTCAAACGCAACTACCGTGTATAACGGTA CAATTGTATTTTCTGGGGAGAAGTTATCCACAGAAGCTGCTGCGAATCCATTGAACGCAACAAGTGTTTTTGACACAAGC GTGTCTCTTGAAGCAGGAACTCTTGTTTTAAAAAGCGGAGCGGGTCTGATTGTAGATTCCTTTACACAGCAAGAGGGTTC TTTAATTGTTATGGATGGCGGAACATCAATAATAACGCGTGTCCCTACAACTGCCAGCCCTGCTCCAAAAGCAACACTAG CTGCTGAGGCACTGCCTGTTGTAAGAGCATTAACCAAATGCACAGATCCTAAGGTTGTATCTGAGTTAGTAGCCTCCTCT TTAATGAACTTTAAGCAAAGAGGTCCTTCAGCCGCAACACCTGCAAACCCTGGGGTATCAGCTTCCCAAACACAAGCTGC AGATGGATCTATTACCATTACTAATCTTGCTGTTAACCTAGATTCTTTAGGTGATGGCAAAATGATTACCCTTACCGCTT CGGGAACAGGTAACATCACTTTATCAGGAGATTTACAATTCCAGGATAGTAGTCAGAACTTCTATGACAATCCTTTATTA AATAAAAACTTCTCTGCAAACATTTTAGACATTTCTACGAATGGCTCCGGAAAAATCGAGACTAATAACTTCAATATGAT TCCTCAGGGATCTACAAGTTCTAATGTTGGTTATCAAGGAAAATGGGAAGTTATTCAAACTACAGATACAAGCGGAAAGG TTTCCTTCGAGCTTAAATGGATAGCCTCTGGCTATACACCTCCTCCTACCCGTAACGCACCTCTCGTGCCCAACAGCTTA TGGTGTTCAGCTATTGACATGCGCGCTATTCAGAATCTTGTTGAGGTTAGCGCGCAAAACTAA
Upstream 100 bases:
>100_bases CAAAAGCTGTTTTTCAAATACCGAGGGTCCCCTAACCTTTGTTGGTCAAAACCATTCCTTAACCTTTAAGAATATCAGTG TAACAGCGTAAGGATCTGCC
Downstream 100 bases:
>100_bases GCTCCTCGCAAAGGACTCTGGACTTCTGGAATATCTAACTTCTTCCACAGAGACGCTACAAAATTACAAAAAGGATTCCG CCATATAAGCTCCGGATATG
Product: outer membrane protein
Products: NA
Alternate protein names: Outer membrane protein 11; Polymorphic membrane protein 8 [H]
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MNNSAGSELTFSGFSNLTFSSATSQTQDKADSAIYVGPKTTVTPPIPPPANSEASGGSQDSSSENTEPKGEENQSEDRGS ESKVNGGESTTTVVEPAASATLWRITSDTSVANADVSDNPSTTGVNSAGNSVHPEIKVGKDAGENSISEEKTKEASAPAT TSPSITFKDNVDITFENNSSKKAGGAINVNGGTGKIENNTGTCTFSKNNAKEQGGAISITGNFDITGNKTVVFSGNKAQV ISSPAQETEGKAAEVTEQEVPAVTTGTGGAIHYLAAPTTSEPGISGQPSGQTEIPSSSVQAILLSADIPAPTPVKKQQEP APAEDPCLTISGSTSVTFTNNSSTTSGGAIHAKKLVLSSGGDITFSNNSSGKGGAIFITDGGDISITAETGSITFQGNTV TSADDIILPSKTPETGEKANKEQPNAALALIASKASAKAVAANQNQKPTHNAIHLGSGAKISQLRAGTGQTIFFYDPITM ATASSSSQSPAKPSIPDSSIRAAAVSAPAPAVTPKTPLKINASDSNATTVYNGTIVFSGEKLSTEAAANPLNATSVFDTS VSLEAGTLVLKSGAGLIVDSFTQQEGSLIVMDGGTSIITRVPTTASPAPKATLAAEALPVVRALTKCTDPKVVSELVASS LMNFKQRGPSAATPANPGVSASQTQAADGSITITNLAVNLDSLGDGKMITLTASGTGNITLSGDLQFQDSSQNFYDNPLL NKNFSANILDISTNGSGKIETNNFNMIPQGSTSSNVGYQGKWEVIQTTDTSGKVSFELKWIASGYTPPPTRNAPLVPNSL WCSAIDMRAIQNLVEVSAQN
Sequences:
>Translated_820_residues MNNSAGSELTFSGFSNLTFSSATSQTQDKADSAIYVGPKTTVTPPIPPPANSEASGGSQDSSSENTEPKGEENQSEDRGS ESKVNGGESTTTVVEPAASATLWRITSDTSVANADVSDNPSTTGVNSAGNSVHPEIKVGKDAGENSISEEKTKEASAPAT TSPSITFKDNVDITFENNSSKKAGGAINVNGGTGKIENNTGTCTFSKNNAKEQGGAISITGNFDITGNKTVVFSGNKAQV ISSPAQETEGKAAEVTEQEVPAVTTGTGGAIHYLAAPTTSEPGISGQPSGQTEIPSSSVQAILLSADIPAPTPVKKQQEP APAEDPCLTISGSTSVTFTNNSSTTSGGAIHAKKLVLSSGGDITFSNNSSGKGGAIFITDGGDISITAETGSITFQGNTV TSADDIILPSKTPETGEKANKEQPNAALALIASKASAKAVAANQNQKPTHNAIHLGSGAKISQLRAGTGQTIFFYDPITM ATASSSSQSPAKPSIPDSSIRAAAVSAPAPAVTPKTPLKINASDSNATTVYNGTIVFSGEKLSTEAAANPLNATSVFDTS VSLEAGTLVLKSGAGLIVDSFTQQEGSLIVMDGGTSIITRVPTTASPAPKATLAAEALPVVRALTKCTDPKVVSELVASS LMNFKQRGPSAATPANPGVSASQTQAADGSITITNLAVNLDSLGDGKMITLTASGTGNITLSGDLQFQDSSQNFYDNPLL NKNFSANILDISTNGSGKIETNNFNMIPQGSTSSNVGYQGKWEVIQTTDTSGKVSFELKWIASGYTPPPTRNAPLVPNSL WCSAIDMRAIQNLVEVSAQN >Mature_820_residues MNNSAGSELTFSGFSNLTFSSATSQTQDKADSAIYVGPKTTVTPPIPPPANSEASGGSQDSSSENTEPKGEENQSEDRGS ESKVNGGESTTTVVEPAASATLWRITSDTSVANADVSDNPSTTGVNSAGNSVHPEIKVGKDAGENSISEEKTKEASAPAT TSPSITFKDNVDITFENNSSKKAGGAINVNGGTGKIENNTGTCTFSKNNAKEQGGAISITGNFDITGNKTVVFSGNKAQV ISSPAQETEGKAAEVTEQEVPAVTTGTGGAIHYLAAPTTSEPGISGQPSGQTEIPSSSVQAILLSADIPAPTPVKKQQEP APAEDPCLTISGSTSVTFTNNSSTTSGGAIHAKKLVLSSGGDITFSNNSSGKGGAIFITDGGDISITAETGSITFQGNTV TSADDIILPSKTPETGEKANKEQPNAALALIASKASAKAVAANQNQKPTHNAIHLGSGAKISQLRAGTGQTIFFYDPITM ATASSSSQSPAKPSIPDSSIRAAAVSAPAPAVTPKTPLKINASDSNATTVYNGTIVFSGEKLSTEAAANPLNATSVFDTS VSLEAGTLVLKSGAGLIVDSFTQQEGSLIVMDGGTSIITRVPTTASPAPKATLAAEALPVVRALTKCTDPKVVSELVASS LMNFKQRGPSAATPANPGVSASQTQAADGSITITNLAVNLDSLGDGKMITLTASGTGNITLSGDLQFQDSSQNFYDNPLL NKNFSANILDISTNGSGKIETNNFNMIPQGSTSSNVGYQGKWEVIQTTDTSGKVSFELKWIASGYTPPPTRNAPLVPNSL WCSAIDMRAIQNLVEVSAQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR003368 - InterPro: IPR006315 - InterPro: IPR011427 [H]
Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]
EC number: NA
Molecular weight: Translated: 83590; Mature: 83590
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSAGSELTFSGFSNLTFSSATSQTQDKADSAIYVGPKTTVTPPIPPPANSEASGGSQD CCCCCCCEEEECCCCCEEECCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC SSSENTEPKGEENQSEDRGSESKVNGGESTTTVVEPAASATLWRITSDTSVANADVSDNP CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEECCCCCCC STTGVNSAGNSVHPEIKVGKDAGENSISEEKTKEASAPATTSPSITFKDNVDITFENNSS CCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCEEEEECCCCC KKAGGAINVNGGTGKIENNTGTCTFSKNNAKEQGGAISITGNFDITGNKTVVFSGNKAQV CCCCCEEEECCCCCEEECCCEEEEECCCCCHHCCCEEEEEEEEEECCCEEEEEECCCEEE ISSPAQETEGKAAEVTEQEVPAVTTGTGGAIHYLAAPTTSEPGISGQPSGQTEIPSSSVQ ECCCHHHHCCCHHHCHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE AILLSADIPAPTPVKKQQEPAPAEDPCLTISGSTSVTFTNNSSTTSGGAIHAKKLVLSSG EEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEECC GDITFSNNSSGKGGAIFITDGGDISITAETGSITFQGNTVTSADDIILPSKTPETGEKAN CCEEECCCCCCCCCEEEEECCCCEEEEEECCEEEEECCEECCCCCEEECCCCCCCCCCCC KEQPNAALALIASKASAKAVAANQNQKPTHNAIHLGSGAKISQLRAGTGQTIFFYDPITM CCCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCEEHEEECCCCCEEEEECCEEE ATASSSSQSPAKPSIPDSSIRAAAVSAPAPAVTPKTPLKINASDSNATTVYNGTIVFSGE EECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCC KLSTEAAANPLNATSVFDTSVSLEAGTLVLKSGAGLIVDSFTQQEGSLIVMDGGTSIITR CCCHHHHCCCCCCCEEEECEEEEECCEEEEECCCCEEEECCCCCCCCEEEEECCCEEEEE VPTTASPAPKATLAAEALPVVRALTKCTDPKVVSELVASSLMNFKQRGPSAATPANPGVS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ASQTQAADGSITITNLAVNLDSLGDGKMITLTASGTGNITLSGDLQFQDSSQNFYDNPLL CCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCC NKNFSANILDISTNGSGKIETNNFNMIPQGSTSSNVGYQGKWEVIQTTDTSGKVSFELKW CCCCCCEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEE IASGYTPPPTRNAPLVPNSLWCSAIDMRAIQNLVEVSAQN EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNNSAGSELTFSGFSNLTFSSATSQTQDKADSAIYVGPKTTVTPPIPPPANSEASGGSQD CCCCCCCEEEECCCCCEEECCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC SSSENTEPKGEENQSEDRGSESKVNGGESTTTVVEPAASATLWRITSDTSVANADVSDNP CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEECCCCCCC STTGVNSAGNSVHPEIKVGKDAGENSISEEKTKEASAPATTSPSITFKDNVDITFENNSS CCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCEEEEECCCCC KKAGGAINVNGGTGKIENNTGTCTFSKNNAKEQGGAISITGNFDITGNKTVVFSGNKAQV CCCCCEEEECCCCCEEECCCEEEEECCCCCHHCCCEEEEEEEEEECCCEEEEEECCCEEE ISSPAQETEGKAAEVTEQEVPAVTTGTGGAIHYLAAPTTSEPGISGQPSGQTEIPSSSVQ ECCCHHHHCCCHHHCHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE AILLSADIPAPTPVKKQQEPAPAEDPCLTISGSTSVTFTNNSSTTSGGAIHAKKLVLSSG EEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEECC GDITFSNNSSGKGGAIFITDGGDISITAETGSITFQGNTVTSADDIILPSKTPETGEKAN CCEEECCCCCCCCCEEEEECCCCEEEEEECCEEEEECCEECCCCCEEECCCCCCCCCCCC KEQPNAALALIASKASAKAVAANQNQKPTHNAIHLGSGAKISQLRAGTGQTIFFYDPITM CCCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCEEHEEECCCCCEEEEECCEEE ATASSSSQSPAKPSIPDSSIRAAAVSAPAPAVTPKTPLKINASDSNATTVYNGTIVFSGE EECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCC KLSTEAAANPLNATSVFDTSVSLEAGTLVLKSGAGLIVDSFTQQEGSLIVMDGGTSIITR CCCHHHHCCCCCCCEEEECEEEEECCEEEEECCCCEEEECCCCCCCCEEEEECCCEEEEE VPTTASPAPKATLAAEALPVVRALTKCTDPKVVSELVASSLMNFKQRGPSAATPANPGVS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ASQTQAADGSITITNLAVNLDSLGDGKMITLTASGTGNITLSGDLQFQDSSQNFYDNPLL CCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCC NKNFSANILDISTNGSGKIETNNFNMIPQGSTSSNVGYQGKWEVIQTTDTSGKVSFELKW CCCCCCEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEE IASGYTPPPTRNAPLVPNSLWCSAIDMRAIQNLVEVSAQN EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10539856; 10192388; 10684935; 10871362 [H]