| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is incA1
Identifier: 89898265
GI number: 89898265
Start: 542659
End: 543702
Strand: Direct
Name: incA1
Synonym: CF0458
Alternate gene names: NA
Gene position: 542659-543702 (Clockwise)
Preceding gene: 89898258
Following gene: 89898266
Centisome position: 46.53
GC content: 39.66
Gene sequence:
>1044_bases ATGTCAGCACCAGTGGAAAATCCCTCACCAATGTTGTCACAAGTCCCTGATATCCGTTCTGGAGAGCGAGAAATACAAGA AAGAAATACAGGCACAACTCTAGTCCCTGGGCATTCACAAACCACAACGACTCTTGCTAAGAGAACCCCAGTTTCAGAAA AGGGTACTTTTCTTCAAAGAGCCCTTCATTTTATGAAAATTATTTCTGCTGTTGCCCTATTGGCTGTAGGGATAGCGGCT TTAATTTGTTTGCAATTTGGGGTGGTAGTATCAACTTCATCGCTCATTTTAATGATTGCGATTCTGCTTGTCTCATTTAT CGTTGTTATTATAGCGATTCAAGGTAGCTTACCATCTCAAATAGCCCGACAAATGAAACAGCAGGTTCAGCAACTGGGCC AAGAAAACGATCGTCTACATGCAGAAGTTGATACCCTACAACAAGCTAATGTGGAGCTTTCTGAGCAAATTACTCAATTG CAACACTTGCATACAAAATTATCAGATTTTGGTGATAAGCTAGAAACTCACACTGGAGATTTCAGAGATCTTATTGTGGA TTTCAAAAACAGTTTAGAAGGGTTTAAGTCTATAGGTGATAAAATAGAAAATTTTATTTCTCCATTTGAGAAATTAGCTA AATCTCTACACGATACATTTTCTAAAGAAGGTGTTCAGGAACTTGTGGTTTCTGTGGGTGCTCTGAGAGATAGTTTGGGG AATTTCAAAGGGCTTATAGAAGAGAATAAGCTTATTTTAGCGCAGATGAAAGAGGACGCAGAGCGCAGGAAAACGCAAAT ACGTTTCTTAGAGAGTCGGAAACAAGAGTTAGAACAAGTGTGCTCAACATTAACAGCTTCTATTGCTTCTTTAAGAACTT CTACAGAGAACTTAAAAAATGTAGAGGGGCGTATTACTAACTCTATAGCAAATGACAGAGGGGCCTCACCATCTTCTACT ACAGTCTCTGCAGAAACTGACCTAGATGTTTCCGGAGATCTGGAGGACAACAGTGATCAACAAGAAGATGAATCGCAGCT GTAA
Upstream 100 bases:
>100_bases TATGCGAATATCAATAGCATGTCTTTTATAAAGAGATTGATTTTATAGTTTTATGTAATTAGCCTCCTCGAATTTAAATT ATGAAAATGGAAACAAATCT
Downstream 100 bases:
>100_bases AGACGTTGTGAATATTAGGTTATAGTGAATCTAATCTGTATTCTCCCATCATATGAAAATCATTAAAATTTTTAATCGCA AAAGGCTGGAGGGTTTCTCT
Product: inclusion membrane protein
Products: NA
Alternate protein names: Inclusion Membrane Protein A
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSAPVENPSPMLSQVPDIRSGEREIQERNTGTTLVPGHSQTTTTLAKRTPVSEKGTFLQRALHFMKIISAVALLAVGIAA LICLQFGVVVSTSSLILMIAILLVSFIVVIIAIQGSLPSQIARQMKQQVQQLGQENDRLHAEVDTLQQANVELSEQITQL QHLHTKLSDFGDKLETHTGDFRDLIVDFKNSLEGFKSIGDKIENFISPFEKLAKSLHDTFSKEGVQELVVSVGALRDSLG NFKGLIEENKLILAQMKEDAERRKTQIRFLESRKQELEQVCSTLTASIASLRTSTENLKNVEGRITNSIANDRGASPSST TVSAETDLDVSGDLEDNSDQQEDESQL
Sequences:
>Translated_347_residues MSAPVENPSPMLSQVPDIRSGEREIQERNTGTTLVPGHSQTTTTLAKRTPVSEKGTFLQRALHFMKIISAVALLAVGIAA LICLQFGVVVSTSSLILMIAILLVSFIVVIIAIQGSLPSQIARQMKQQVQQLGQENDRLHAEVDTLQQANVELSEQITQL QHLHTKLSDFGDKLETHTGDFRDLIVDFKNSLEGFKSIGDKIENFISPFEKLAKSLHDTFSKEGVQELVVSVGALRDSLG NFKGLIEENKLILAQMKEDAERRKTQIRFLESRKQELEQVCSTLTASIASLRTSTENLKNVEGRITNSIANDRGASPSST TVSAETDLDVSGDLEDNSDQQEDESQL >Mature_346_residues SAPVENPSPMLSQVPDIRSGEREIQERNTGTTLVPGHSQTTTTLAKRTPVSEKGTFLQRALHFMKIISAVALLAVGIAAL ICLQFGVVVSTSSLILMIAILLVSFIVVIIAIQGSLPSQIARQMKQQVQQLGQENDRLHAEVDTLQQANVELSEQITQLQ HLHTKLSDFGDKLETHTGDFRDLIVDFKNSLEGFKSIGDKIENFISPFEKLAKSLHDTFSKEGVQELVVSVGALRDSLGN FKGLIEENKLILAQMKEDAERRKTQIRFLESRKQELEQVCSTLTASIASLRTSTENLKNVEGRITNSIANDRGASPSSTT VSAETDLDVSGDLEDNSDQQEDESQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38140; Mature: 38009
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVENPSPMLSQVPDIRSGEREIQERNTGTTLVPGHSQTTTTLAKRTPVSEKGTFLQR CCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHH ALHFMKIISAVALLAVGIAALICLQFGVVVSTSSLILMIAILLVSFIVVIIAIQGSLPSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IARQMKQQVQQLGQENDRLHAEVDTLQQANVELSEQITQLQHLHTKLSDFGDKLETHTGD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FRDLIVDFKNSLEGFKSIGDKIENFISPFEKLAKSLHDTFSKEGVQELVVSVGALRDSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFKGLIEENKLILAQMKEDAERRKTQIRFLESRKQELEQVCSTLTASIASLRTSTENLKN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEGRITNSIANDRGASPSSTTVSAETDLDVSGDLEDNSDQQEDESQL HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure SAPVENPSPMLSQVPDIRSGEREIQERNTGTTLVPGHSQTTTTLAKRTPVSEKGTFLQR CCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHH ALHFMKIISAVALLAVGIAALICLQFGVVVSTSSLILMIAILLVSFIVVIIAIQGSLPSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IARQMKQQVQQLGQENDRLHAEVDTLQQANVELSEQITQLQHLHTKLSDFGDKLETHTGD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FRDLIVDFKNSLEGFKSIGDKIENFISPFEKLAKSLHDTFSKEGVQELVVSVGALRDSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFKGLIEENKLILAQMKEDAERRKTQIRFLESRKQELEQVCSTLTASIASLRTSTENLKN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEGRITNSIANDRGASPSSTTVSAETDLDVSGDLEDNSDQQEDESQL HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA