| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898266
Identifier: 89898266
GI number: 89898266
Start: 543838
End: 544653
Strand: Direct
Name: 89898266
Synonym: CF0459
Alternate gene names: NA
Gene position: 543838-544653 (Clockwise)
Preceding gene: 89898265
Following gene: 89898267
Centisome position: 46.63
GC content: 35.54
Gene sequence:
>816_bases ATGTCTCACTATACCTTCAAAAAAAAGCGCTCCCGTTCTTCTGGGAAAGCATATGAAAAGTCAACATCTTGGGAATCCAT AGCTGAAGATTATCATAAAATCGTTCAGAATAAAGGGCATTTTTATCATAAAGAAGTCATAATTCCTAAACTGCTTCCTT TATTAGATTTAAAATCAAAAGACTCCTTAGTGGATATCGGTTGCGGTCAGGGAATTTTAGAAAGAGTGATTCCCAAGGAA TGTGGGTATCTAGGTTTAGATATTTCTCCTAGTCTGATTTCTATTGCAAGGAATTTGCGAAAATCACGCTCCCACGCATT TGCTATTCAAGATCTTACAAAAAATCTTGAAGTAGAGAATATTCGGTCTTTTTCTCATGCTGTAGCTATTTTATCTCTAC AAAATATGGAGAACCCGGATCAGGCAATTAAGAACACTTCTAAGCTTCTTTGCGATAAGGGAAGGTTTTTAATGGTGTTA AATCACCCTTGTTTTCGTATTCCTAGAGTATCCTCGTGGCATTATGACGAAGATAAAAAGCTTCTTTCTAGAAAGATTGA TCGTTATCTTTCTAAAATGATAATTCCGATAATTGCCCATCCAGGAAAAAAGCAGTCGGAATCTTCTATTTCTTTTCACT TTCCCTTAAGTTACTGGACCCAAGCATTAGCGAGGTTTGGGTTTGTTATTGAGAATATGGAAGAGTGGATCTCCCCTAAA AAATCTATAGGAACACGTGCCAAAGCAGAAAACGTTTGTCGCGAAGAGTTTCCATTATTCTTATTAATCTCTTGTATTAA GATTAATAATATTTAA
Upstream 100 bases:
>100_bases CTGTATTCTCCCATCATATGAAAATCATTAAAATTTTTAATCGCAAAAGGCTGGAGGGTTTCTCTTGCCTTTTTTTTTAT CTCCGTATAAATTTTTCCTA
Downstream 100 bases:
>100_bases TAAAATAAAGTTTATAAAACTTGGCGTCAAAAAGCATTTTTTTATTAAAATAAGTAAAAACGCTTTTTGATTTAATATGT TTCGGAAGTTCTCACTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type; rRNA Methylase; Methylase
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSHYTFKKKRSRSSGKAYEKSTSWESIAEDYHKIVQNKGHFYHKEVIIPKLLPLLDLKSKDSLVDIGCGQGILERVIPKE CGYLGLDISPSLISIARNLRKSRSHAFAIQDLTKNLEVENIRSFSHAVAILSLQNMENPDQAIKNTSKLLCDKGRFLMVL NHPCFRIPRVSSWHYDEDKKLLSRKIDRYLSKMIIPIIAHPGKKQSESSISFHFPLSYWTQALARFGFVIENMEEWISPK KSIGTRAKAENVCREEFPLFLLISCIKINNI
Sequences:
>Translated_271_residues MSHYTFKKKRSRSSGKAYEKSTSWESIAEDYHKIVQNKGHFYHKEVIIPKLLPLLDLKSKDSLVDIGCGQGILERVIPKE CGYLGLDISPSLISIARNLRKSRSHAFAIQDLTKNLEVENIRSFSHAVAILSLQNMENPDQAIKNTSKLLCDKGRFLMVL NHPCFRIPRVSSWHYDEDKKLLSRKIDRYLSKMIIPIIAHPGKKQSESSISFHFPLSYWTQALARFGFVIENMEEWISPK KSIGTRAKAENVCREEFPLFLLISCIKINNI >Mature_270_residues SHYTFKKKRSRSSGKAYEKSTSWESIAEDYHKIVQNKGHFYHKEVIIPKLLPLLDLKSKDSLVDIGCGQGILERVIPKEC GYLGLDISPSLISIARNLRKSRSHAFAIQDLTKNLEVENIRSFSHAVAILSLQNMENPDQAIKNTSKLLCDKGRFLMVLN HPCFRIPRVSSWHYDEDKKLLSRKIDRYLSKMIIPIIAHPGKKQSESSISFHFPLSYWTQALARFGFVIENMEEWISPKK SIGTRAKAENVCREEFPLFLLISCIKINNI
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31163; Mature: 31031
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHYTFKKKRSRSSGKAYEKSTSWESIAEDYHKIVQNKGHFYHKEVIIPKLLPLLDLKSK CCCCCCHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC DSLVDIGCGQGILERVIPKECGYLGLDISPSLISIARNLRKSRSHAFAIQDLTKNLEVEN CCEEECCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IRSFSHAVAILSLQNMENPDQAIKNTSKLLCDKGRFLMVLNHPCFRIPRVSSWHYDEDKK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHH LLSRKIDRYLSKMIIPIIAHPGKKQSESSISFHFPLSYWTQALARFGFVIENMEEWISPK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCH KSIGTRAKAENVCREEFPLFLLISCIKINNI HHHCCHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure SHYTFKKKRSRSSGKAYEKSTSWESIAEDYHKIVQNKGHFYHKEVIIPKLLPLLDLKSK CCCCCHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC DSLVDIGCGQGILERVIPKECGYLGLDISPSLISIARNLRKSRSHAFAIQDLTKNLEVEN CCEEECCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IRSFSHAVAILSLQNMENPDQAIKNTSKLLCDKGRFLMVLNHPCFRIPRVSSWHYDEDKK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHH LLSRKIDRYLSKMIIPIIAHPGKKQSESSISFHFPLSYWTQALARFGFVIENMEEWISPK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCH KSIGTRAKAENVCREEFPLFLLISCIKINNI HHHCCHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA