| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898258
Identifier: 89898258
GI number: 89898258
Start: 535062
End: 536081
Strand: Direct
Name: 89898258
Synonym: CF0451
Alternate gene names: NA
Gene position: 535062-536081 (Clockwise)
Preceding gene: 89898257
Following gene: 89898265
Centisome position: 45.88
GC content: 40.98
Gene sequence:
>1020_bases ATGTCTAGTTCGAACGGAATAGACAATTGTTTAAGTTTTACACAAAACACTGAAACAGGGCGAAGGGTTTTACAGTCTAA GTTTTTGAAAATAAGTGCCTCTATTGTTGGGGTCGCACTTCCGACTATTTTTATACTTCTCGGAGCTTTAGGTCTTGTAG GAAGTGCCAGTTGTGGATTGTTAATCTTTGGGAGCATATCGTTTGGACTTGTAATTATTTGTTTAATTAGAGCAGCCCTT TGTAGAAGACAAAAATCCTCATCAGAGGTTCTTGAAATGTCCCTAGAGGGTTTTGAAATGTCTTCAGTTAATCTTGCAGA AGTCGCTTTACCGGAGGTGGCTTTGAGGTCAGCTGCAGAAGGTGCGTGCCCCCCTTTAAACACTCAAGGCATGGCTGCTA TGGAATTTGCAGAGCAGTTGCTCCGGGATGAAAGAGGAGACTTGGAACCTATTACTTGGCTACGCTGCATTCCCCCAATT AATGAGGATATTTCTTATTTATTTGTTTTAGTAGAAAAAAAACGACAAGAACTTTTGGGTGCATTGATAAACGACGAGGG GCGCATTGTACTCCCCGAGGAAGAAGATGAGTTGTTTACACTTCTCATGACGGAATATCTTCAAGCATCTTTCGCAATTA GTATCTATACTTTGAGGGATTTAGATGCCTTTAGAGAACGAGAAGGGCAAGCTTTATCAAATTTAGATAGATTAGTTAAT AGGCGCTTCTATCATTATAAAACATTTTATGGAGCATCAGTAGCTTATTCTTTTGCAAGATTCCTACATATATTTTGCGA TCGCAGCCTTCCCTCAGATGTGGTTAATCGTTGGTCTGCTAGATTTTATCGAGAGGGTACGCCTGAATTTGAGTGGAGAG CTCTCTACAATAATTTCTGCGAGCAGGCTTGCTGGTATATTGGCAATGAACAGGCTGCTGAAGCAAGAGAGGATCGTTTG ATTAAGCACTCAAGAGTAGATACCGGTCGCGGATTTCAATATTCGGGTACTATCCCCTAA
Upstream 100 bases:
>100_bases TTTGTAAAAATATAAATATTTTAGGTATAGAATTTTTGATTTGATTTTAATTGGTGTGTTTGCTTAGAATTTTTCGGTCG ATTTTTTAATTTGGTGCTGT
Downstream 100 bases:
>100_bases AGTCTGGTTTCTAGATTCATATAGGACAAAGATATTAGGCGTCCCCTGTTAAGTGTTACAAAGGACGCACGGTTCTCTAT TTGCGAATGTATAATTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSSSNGIDNCLSFTQNTETGRRVLQSKFLKISASIVGVALPTIFILLGALGLVGSASCGLLIFGSISFGLVIICLIRAAL CRRQKSSSEVLEMSLEGFEMSSVNLAEVALPEVALRSAAEGACPPLNTQGMAAMEFAEQLLRDERGDLEPITWLRCIPPI NEDISYLFVLVEKKRQELLGALINDEGRIVLPEEEDELFTLLMTEYLQASFAISIYTLRDLDAFREREGQALSNLDRLVN RRFYHYKTFYGASVAYSFARFLHIFCDRSLPSDVVNRWSARFYREGTPEFEWRALYNNFCEQACWYIGNEQAAEAREDRL IKHSRVDTGRGFQYSGTIP
Sequences:
>Translated_339_residues MSSSNGIDNCLSFTQNTETGRRVLQSKFLKISASIVGVALPTIFILLGALGLVGSASCGLLIFGSISFGLVIICLIRAAL CRRQKSSSEVLEMSLEGFEMSSVNLAEVALPEVALRSAAEGACPPLNTQGMAAMEFAEQLLRDERGDLEPITWLRCIPPI NEDISYLFVLVEKKRQELLGALINDEGRIVLPEEEDELFTLLMTEYLQASFAISIYTLRDLDAFREREGQALSNLDRLVN RRFYHYKTFYGASVAYSFARFLHIFCDRSLPSDVVNRWSARFYREGTPEFEWRALYNNFCEQACWYIGNEQAAEAREDRL IKHSRVDTGRGFQYSGTIP >Mature_338_residues SSSNGIDNCLSFTQNTETGRRVLQSKFLKISASIVGVALPTIFILLGALGLVGSASCGLLIFGSISFGLVIICLIRAALC RRQKSSSEVLEMSLEGFEMSSVNLAEVALPEVALRSAAEGACPPLNTQGMAAMEFAEQLLRDERGDLEPITWLRCIPPIN EDISYLFVLVEKKRQELLGALINDEGRIVLPEEEDELFTLLMTEYLQASFAISIYTLRDLDAFREREGQALSNLDRLVNR RFYHYKTFYGASVAYSFARFLHIFCDRSLPSDVVNRWSARFYREGTPEFEWRALYNNFCEQACWYIGNEQAAEAREDRLI KHSRVDTGRGFQYSGTIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38157; Mature: 38026
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSNGIDNCLSFTQNTETGRRVLQSKFLKISASIVGVALPTIFILLGALGLVGSASCGL CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LIFGSISFGLVIICLIRAALCRRQKSSSEVLEMSLEGFEMSSVNLAEVALPEVALRSAAE EEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC GACPPLNTQGMAAMEFAEQLLRDERGDLEPITWLRCIPPINEDISYLFVLVEKKRQELLG CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ALINDEGRIVLPEEEDELFTLLMTEYLQASFAISIYTLRDLDAFREREGQALSNLDRLVN HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCHHHHHHHHHHH RRFYHYKTFYGASVAYSFARFLHIFCDRSLPSDVVNRWSARFYREGTPEFEWRALYNNFC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EQACWYIGNEQAAEAREDRLIKHSRVDTGRGFQYSGTIP HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC >Mature Secondary Structure SSSNGIDNCLSFTQNTETGRRVLQSKFLKISASIVGVALPTIFILLGALGLVGSASCGL CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LIFGSISFGLVIICLIRAALCRRQKSSSEVLEMSLEGFEMSSVNLAEVALPEVALRSAAE EEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC GACPPLNTQGMAAMEFAEQLLRDERGDLEPITWLRCIPPINEDISYLFVLVEKKRQELLG CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ALINDEGRIVLPEEEDELFTLLMTEYLQASFAISIYTLRDLDAFREREGQALSNLDRLVN HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCHHHHHHHHHHH RRFYHYKTFYGASVAYSFARFLHIFCDRSLPSDVVNRWSARFYREGTPEFEWRALYNNFC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EQACWYIGNEQAAEAREDRLIKHSRVDTGRGFQYSGTIP HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA