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The map label for this gene is yccA [C]

Identifier: 89898034

GI number: 89898034

Start: 269189

End: 269905

Strand: Direct

Name: yccA [C]

Synonym: CF0227

Alternate gene names: 89898034

Gene position: 269189-269905 (Clockwise)

Preceding gene: 89898033

Following gene: 89898036

Centisome position: 23.08

GC content: 41.0

Gene sequence:

>717_bases
ATGGGACTATACGATCGTGATTACGCGCAAGAATCTCGTTTGCCAGGGACATTCACATCCAGAGTGTATGGCTGGATGAC
AGCAGGTCTGGCTGTAACGACTTTTGTGTCGTTAGGGTTATACTTTTCCGGAATGTATAAAAGTTTGTTCGCATTCTGGT
GGGTGTGGTGCATTGCTACACTCGGGGTGTCTTTTTACATTAACGCTAAGATTCATAAACTTTCCGTTCCTGCGGTTATG
GGGCTTTTCTTGGCCTATTCTGCTTTAGAAGGATTGTTTTTTGGAACCTTAGTGCCTGTTTACGCCGCTCAATACGGTGG
AGGAATTGTTTGGGCTGCTTTTGGATCTGCAGGATTAATTTTTGGTTTGTCAGCCGCCTATGGCGCCTTTACCAAAAGCG
ATCTTACCCAGATGAGAAGTATTCTGATGTTCGCTCTAATCGGGTTGATGTTGGTCTCAGTGATATTTGCGTTGGTTTCT
ATATTTGTTTATATGCCAATGTTCTACTTATTGATTTGCTACATAGGGTTAGCTATTTTTGTAGGTTTGACTGTTGTAGA
CGCTCAAGCTATCCGTAGTGTGGCTAAAAATGTAGGTAATGATGGTGATCTGAGCTACAAACTATCTTTAATCATGGCGT
TAAAGATGTATTGTAATGTCATCATGATATTCTGGTATCTTCTACAAATTTTCTCCTCTTCTGGAAAGAGAAATTAA

Upstream 100 bases:

>100_bases
GTGGTAATGGTAATTAATTTGGTGAGTCTTTATTATAAATTTTAAATAAACAGCAGCATGTTTGTTAAGTTTTTAATTGT
ATGTGAGTATAGGAGGTAAT

Downstream 100 bases:

>100_bases
AAATATTTTTTATCTTAAGAAGAAGGGAAAAGTTTTTCTAAGAACCGATCTATATGAAACTCTTCAAGATCCCCAATAAG
TTCGCCATAACCAACGAATT

Product: transport permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGLYDRDYAQESRLPGTFTSRVYGWMTAGLAVTTFVSLGLYFSGMYKSLFAFWWVWCIATLGVSFYINAKIHKLSVPAVM
GLFLAYSALEGLFFGTLVPVYAAQYGGGIVWAAFGSAGLIFGLSAAYGAFTKSDLTQMRSILMFALIGLMLVSVIFALVS
IFVYMPMFYLLICYIGLAIFVGLTVVDAQAIRSVAKNVGNDGDLSYKLSLIMALKMYCNVIMIFWYLLQIFSSSGKRN

Sequences:

>Translated_238_residues
MGLYDRDYAQESRLPGTFTSRVYGWMTAGLAVTTFVSLGLYFSGMYKSLFAFWWVWCIATLGVSFYINAKIHKLSVPAVM
GLFLAYSALEGLFFGTLVPVYAAQYGGGIVWAAFGSAGLIFGLSAAYGAFTKSDLTQMRSILMFALIGLMLVSVIFALVS
IFVYMPMFYLLICYIGLAIFVGLTVVDAQAIRSVAKNVGNDGDLSYKLSLIMALKMYCNVIMIFWYLLQIFSSSGKRN
>Mature_237_residues
GLYDRDYAQESRLPGTFTSRVYGWMTAGLAVTTFVSLGLYFSGMYKSLFAFWWVWCIATLGVSFYINAKIHKLSVPAVMG
LFLAYSALEGLFFGTLVPVYAAQYGGGIVWAAFGSAGLIFGLSAAYGAFTKSDLTQMRSILMFALIGLMLVSVIFALVSI
FVYMPMFYLLICYIGLAIFVGLTVVDAQAIRSVAKNVGNDGDLSYKLSLIMALKMYCNVIMIFWYLLQIFSSSGKRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=222, Percent_Identity=34.2342342342342, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26260; Mature: 26128

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLYDRDYAQESRLPGTFTSRVYGWMTAGLAVTTFVSLGLYFSGMYKSLFAFWWVWCIAT
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVSFYINAKIHKLSVPAVMGLFLAYSALEGLFFGTLVPVYAAQYGGGIVWAAFGSAGLI
HHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCHHH
FGLSAAYGAFTKSDLTQMRSILMFALIGLMLVSVIFALVSIFVYMPMFYLLICYIGLAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTVVDAQAIRSVAKNVGNDGDLSYKLSLIMALKMYCNVIMIFWYLLQIFSSSGKRN
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GLYDRDYAQESRLPGTFTSRVYGWMTAGLAVTTFVSLGLYFSGMYKSLFAFWWVWCIAT
CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVSFYINAKIHKLSVPAVMGLFLAYSALEGLFFGTLVPVYAAQYGGGIVWAAFGSAGLI
HHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCHHH
FGLSAAYGAFTKSDLTQMRSILMFALIGLMLVSVIFALVSIFVYMPMFYLLICYIGLAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTVVDAQAIRSVAKNVGNDGDLSYKLSLIMALKMYCNVIMIFWYLLQIFSSSGKRN
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]