| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257197
Identifier: 89257197
GI number: 89257197
Start: 1889108
End: 1889476
Strand: Reverse
Name: 89257197
Synonym: FTL_1961
Alternate gene names: NA
Gene position: 1889476-1889108 (Counterclockwise)
Preceding gene: 89257198
Following gene: 89257196
Centisome position: 99.66
GC content: 30.62
Gene sequence:
>369_bases ATGAGTAAACGCTTTACAGAAGATCATTATCAAAAAATATGTACTGATCTTGAATATAGAGAAAAACTTATAAAAAATCC AAAACTTACTTTAAATGAAGAGTATGGTACCACTATCAATGATGAAGTAAATGTTGAAGTTATAGAGCAAAGTGATGATG CTATTACAATAATTTTACCTGCTAAACCAGACAATCAAGATGATATCGAGTCAGAATTAGAAACTGTAACTGAGCAAGTA GTTGATTTACTGTTTACTCATGATGGCATGGGTGGGTTTTTGATTCCTGATGATAATTTGAAATGGGAGTTGCGCAATAT GAGAAAAGATTGGATGAAAAAACTAGGTCTAGATTTAGAAAATTCTTAA
Upstream 100 bases:
>100_bases ATATGGTCAAGTGGAAAAATGTTTTTATGGTTAGCATCAGCAGAGCAAAAAGCAAAGTTGCTACAACTTCGAAATAGTAT ATTTACAACAGGAGCTAATC
Downstream 100 bases:
>100_bases TATTTTAATCATCATCAAATTTATTTATTCAACATTTGTTTATATAATTTTTTAGTATCATAATTAAAATTAAGGATTAT ATTATGATTAAGAAGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSKRFTEDHYQKICTDLEYREKLIKNPKLTLNEEYGTTINDEVNVEVIEQSDDAITIILPAKPDNQDDIESELETVTEQV VDLLFTHDGMGGFLIPDDNLKWELRNMRKDWMKKLGLDLENS
Sequences:
>Translated_122_residues MSKRFTEDHYQKICTDLEYREKLIKNPKLTLNEEYGTTINDEVNVEVIEQSDDAITIILPAKPDNQDDIESELETVTEQV VDLLFTHDGMGGFLIPDDNLKWELRNMRKDWMKKLGLDLENS >Mature_121_residues SKRFTEDHYQKICTDLEYREKLIKNPKLTLNEEYGTTINDEVNVEVIEQSDDAITIILPAKPDNQDDIESELETVTEQVV DLLFTHDGMGGFLIPDDNLKWELRNMRKDWMKKLGLDLENS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14246; Mature: 14115
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRFTEDHYQKICTDLEYREKLIKNPKLTLNEEYGTTINDEVNVEVIEQSDDAITIILP CCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCEEEEEEE AKPDNQDDIESELETVTEQVVDLLFTHDGMGGFLIPDDNLKWELRNMRKDWMKKLGLDLE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC NS CC >Mature Secondary Structure SKRFTEDHYQKICTDLEYREKLIKNPKLTLNEEYGTTINDEVNVEVIEQSDDAITIILP CCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCEEEEEEE AKPDNQDDIESELETVTEQVVDLLFTHDGMGGFLIPDDNLKWELRNMRKDWMKKLGLDLE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC NS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA