| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257198
Identifier: 89257198
GI number: 89257198
Start: 1889469
End: 1889810
Strand: Reverse
Name: 89257198
Synonym: FTL_1962
Alternate gene names: NA
Gene position: 1889810-1889469 (Counterclockwise)
Preceding gene: 89257199
Following gene: 89257197
Centisome position: 99.67
GC content: 31.87
Gene sequence:
>342_bases ATGGATAAAAATGATTTTGAGTATCTTTTGACTAAAAGAGCTTGGGAGGATAAGGAGTTTGTAGATTTATTAACTAGTAA CCCTTATCAAGCTTTAGCTCAGTTGGGAGTATCTATTCCTGAGAATATAAAGCTAAAAGTTGTGCAACAAAAAAAAGATA CTTTATATTTCACTATTCCTGCTTTTGATAAAAAGCGTAGTCAAGAGAAGCCTTTTCAACTTAATCAGATAGATATATGG TCAAGTGGAAAAATGTTTTTATGGTTAGCATCAGCAGAGCAAAAAGCAAAGTTGCTACAACTTCGAAATAGTATATTTAC AACAGGAGCTAATCATGAGTAA
Upstream 100 bases:
>100_bases ATCCTGAGCTTAAAAAGATTTTTCAGAAATGAAATTACTTATATTAACTAGCAATATTTTATTTAGCTTATCGCTGATTT GAATAAAATAGGAGAAGAAA
Downstream 100 bases:
>100_bases ACGCTTTACAGAAGATCATTATCAAAAAATATGTACTGATCTTGAATATAGAGAAAAACTTATAAAAAATCCAAAACTTA CTTTAAATGAAGAGTATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MDKNDFEYLLTKRAWEDKEFVDLLTSNPYQALAQLGVSIPENIKLKVVQQKKDTLYFTIPAFDKKRSQEKPFQLNQIDIW SSGKMFLWLASAEQKAKLLQLRNSIFTTGANHE
Sequences:
>Translated_113_residues MDKNDFEYLLTKRAWEDKEFVDLLTSNPYQALAQLGVSIPENIKLKVVQQKKDTLYFTIPAFDKKRSQEKPFQLNQIDIW SSGKMFLWLASAEQKAKLLQLRNSIFTTGANHE >Mature_113_residues MDKNDFEYLLTKRAWEDKEFVDLLTSNPYQALAQLGVSIPENIKLKVVQQKKDTLYFTIPAFDKKRSQEKPFQLNQIDIW SSGKMFLWLASAEQKAKLLQLRNSIFTTGANHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13182; Mature: 13182
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNDFEYLLTKRAWEDKEFVDLLTSNPYQALAQLGVSIPENIKLKVVQQKKDTLYFTIP CCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEC AFDKKRSQEKPFQLNQIDIWSSGKMFLWLASAEQKAKLLQLRNSIFTTGANHE CCCCCCCCCCCEECCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDKNDFEYLLTKRAWEDKEFVDLLTSNPYQALAQLGVSIPENIKLKVVQQKKDTLYFTIP CCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEC AFDKKRSQEKPFQLNQIDIWSSGKMFLWLASAEQKAKLLQLRNSIFTTGANHE CCCCCCCCCCCEECCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA