| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257069
Identifier: 89257069
GI number: 89257069
Start: 1738581
End: 1739879
Strand: Reverse
Name: 89257069
Synonym: FTL_1806
Alternate gene names: NA
Gene position: 1739879-1738581 (Counterclockwise)
Preceding gene: 89257070
Following gene: 89257068
Centisome position: 91.77
GC content: 33.87
Gene sequence:
>1299_bases ATGAAATTACATAATATAAAGGGCTATGCTTGGATTGTAGTTGGGTTAAGCTCATTTCTACTAATCGATAAATATATAAT GAATGTTTCTCCTAGCTTGATTGCTAATGAGCTTATGAGTAGTTTTTCAATAAATGCTACTGAAATGAGTGCGATGGTTT CGTTATTTTTATGGTCTGTAGTATTTTGTCAATTTTTTGTTGCTGGACCTATCATTGATAAATTGGGGTTTAGAAAAGTA AGTTTTTTCTCATTAATATTATCTGCAATTGGATTATTATTATTTGTATTATCTGCAGATATTCACAGTTTTGCACTAGG TTGTGTTTCAAGACTAATGATAGGTATTGGAGCCTCATTTGCAACAGTCGGCTATATAAAAGCCGCTGCAGTATGGTTTG ATCCACGCAAGTTTGCTTTTGTATGTAGCTTTCTGATGACAGCAGCTATGACTGGTGCATTGTTGGGTCAGGTACCGCTA GTTTATCTAATTGAGCTTACAGGATCATGGCATAGAGCATTAATCAGTTATGCTTGCTTTAGTATTGTTATAGCACTTTT ATACTTAGCATTAGTTAGAGATTACAATCCTGATGCTTCATACTCAAACCAAACAAAAGGTAATACTGGAACGCTTGCTG GAATAAAAAAAGTTCTTTTAAATAAAAATAATTGGTATCTTACATTGTATACCGGTCTTACTTTTACCACGATAGATGTT TTTGGCGGAATTTGGGGTAATAACTATTTTAGAGAGTTATATAGCATACCGGCAAAAGATGCCTCGTATATTGTTTCGAT GATGTTCTTGGGTCTTGCGATTGGCTCACCTATAATTGGTAAGCTCTCAGAGAAATTTGATAATAGGGTTGGGATTATGG TTGCCTTTCATATTATTGCAACAATTTCTTTAGCGGTAGTTCTACAATTTAAGCTTACACCAACAATATCTGGAGTTTTA CTATTTGTTTTTGGCTTCTGTTTAGGAGTTTATATGCTAGCTTTTGCTATAGGAAACCGTATAAATCCAGTTGTGGTCGC TGCAACAGTTGCGGCATTGATAAATACTGGTGAGCCATTATTAGGAGCTTTATTTGATCTATTAATAGGCCATTTGTTAG ATTTGACATGGACAGGCCAATATATAGATGCACAAAATCATATTAGTGCTATAGCTTCAGAGGGGGCGCATAGATATTTC CATATAAATGCATATCATCATGCTTTTTTAATCCTTGTATTTAGCATGATCGTATCATTCTTTTTGCTTATTTTAGTAAA AGATAAAGAAGTTAAATAA
Upstream 100 bases:
>100_bases AGATAATGGCTTTGCTGGTATAAAATTTCTTCAACAAAATGAAGAACAACAACAAGTTGCTTTTAATGAGTTAATAAATT TTTTAGAAAGATAGAGGTTT
Downstream 100 bases:
>100_bases AAATGAAACTTGAGAATATTTATCTTCAAAAAATTCGTGAACTTGACTTAAAAGTTGATTCTTTACAACTTGAGGCTATT AGACGCTTGCAAGAAATAGT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Sugar Phosphate Permease; Sugar Transporter; Transporter MFS Superfamily; Facilitator Family Transporter Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Permease; Facilitator Family Oxalate/Formate Antiporter; Sugar Transport Family Protein; Multidrug ABC Transporter; Facilitator Superfamily Sugar Transporter; NasA Protein; Facilitator Protein; Facilitator Membrane Proteins; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Transport Proteins; Facilitator Family Protein
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKLHNIKGYAWIVVGLSSFLLIDKYIMNVSPSLIANELMSSFSINATEMSAMVSLFLWSVVFCQFFVAGPIIDKLGFRKV SFFSLILSAIGLLLFVLSADIHSFALGCVSRLMIGIGASFATVGYIKAAAVWFDPRKFAFVCSFLMTAAMTGALLGQVPL VYLIELTGSWHRALISYACFSIVIALLYLALVRDYNPDASYSNQTKGNTGTLAGIKKVLLNKNNWYLTLYTGLTFTTIDV FGGIWGNNYFRELYSIPAKDASYIVSMMFLGLAIGSPIIGKLSEKFDNRVGIMVAFHIIATISLAVVLQFKLTPTISGVL LFVFGFCLGVYMLAFAIGNRINPVVVAATVAALINTGEPLLGALFDLLIGHLLDLTWTGQYIDAQNHISAIASEGAHRYF HINAYHHAFLILVFSMIVSFFLLILVKDKEVK
Sequences:
>Translated_432_residues MKLHNIKGYAWIVVGLSSFLLIDKYIMNVSPSLIANELMSSFSINATEMSAMVSLFLWSVVFCQFFVAGPIIDKLGFRKV SFFSLILSAIGLLLFVLSADIHSFALGCVSRLMIGIGASFATVGYIKAAAVWFDPRKFAFVCSFLMTAAMTGALLGQVPL VYLIELTGSWHRALISYACFSIVIALLYLALVRDYNPDASYSNQTKGNTGTLAGIKKVLLNKNNWYLTLYTGLTFTTIDV FGGIWGNNYFRELYSIPAKDASYIVSMMFLGLAIGSPIIGKLSEKFDNRVGIMVAFHIIATISLAVVLQFKLTPTISGVL LFVFGFCLGVYMLAFAIGNRINPVVVAATVAALINTGEPLLGALFDLLIGHLLDLTWTGQYIDAQNHISAIASEGAHRYF HINAYHHAFLILVFSMIVSFFLLILVKDKEVK >Mature_432_residues MKLHNIKGYAWIVVGLSSFLLIDKYIMNVSPSLIANELMSSFSINATEMSAMVSLFLWSVVFCQFFVAGPIIDKLGFRKV SFFSLILSAIGLLLFVLSADIHSFALGCVSRLMIGIGASFATVGYIKAAAVWFDPRKFAFVCSFLMTAAMTGALLGQVPL VYLIELTGSWHRALISYACFSIVIALLYLALVRDYNPDASYSNQTKGNTGTLAGIKKVLLNKNNWYLTLYTGLTFTTIDV FGGIWGNNYFRELYSIPAKDASYIVSMMFLGLAIGSPIIGKLSEKFDNRVGIMVAFHIIATISLAVVLQFKLTPTISGVL LFVFGFCLGVYMLAFAIGNRINPVVVAATVAALINTGEPLLGALFDLLIGHLLDLTWTGQYIDAQNHISAIASEGAHRYF HINAYHHAFLILVFSMIVSFFLLILVKDKEVK
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47421; Mature: 47421
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHNIKGYAWIVVGLSSFLLIDKYIMNVSPSLIANELMSSFSINATEMSAMVSLFLWSV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VFCQFFVAGPIIDKLGFRKVSFFSLILSAIGLLLFVLSADIHSFALGCVSRLMIGIGASF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ATVGYIKAAAVWFDPRKFAFVCSFLMTAAMTGALLGQVPLVYLIELTGSWHRALISYACF HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH SIVIALLYLALVRDYNPDASYSNQTKGNTGTLAGIKKVLLNKNNWYLTLYTGLTFTTIDV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHH FGGIWGNNYFRELYSIPAKDASYIVSMMFLGLAIGSPIIGKLSEKFDNRVGIMVAFHIIA HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH TISLAVVLQFKLTPTISGVLLFVFGFCLGVYMLAFAIGNRINPVVVAATVAALINTGEPL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH LGALFDLLIGHLLDLTWTGQYIDAQNHISAIASEGAHRYFHINAYHHAFLILVFSMIVSF HHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH FLLILVKDKEVK HHHHHHCCCCCC >Mature Secondary Structure MKLHNIKGYAWIVVGLSSFLLIDKYIMNVSPSLIANELMSSFSINATEMSAMVSLFLWSV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VFCQFFVAGPIIDKLGFRKVSFFSLILSAIGLLLFVLSADIHSFALGCVSRLMIGIGASF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ATVGYIKAAAVWFDPRKFAFVCSFLMTAAMTGALLGQVPLVYLIELTGSWHRALISYACF HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH SIVIALLYLALVRDYNPDASYSNQTKGNTGTLAGIKKVLLNKNNWYLTLYTGLTFTTIDV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHH FGGIWGNNYFRELYSIPAKDASYIVSMMFLGLAIGSPIIGKLSEKFDNRVGIMVAFHIIA HHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH TISLAVVLQFKLTPTISGVLLFVFGFCLGVYMLAFAIGNRINPVVVAATVAALINTGEPL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH LGALFDLLIGHLLDLTWTGQYIDAQNHISAIASEGAHRYFHINAYHHAFLILVFSMIVSF HHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH FLLILVKDKEVK HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA