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The map label for this gene is yhcM [H]

Identifier: 89257068

GI number: 89257068

Start: 1737511

End: 1738578

Strand: Reverse

Name: yhcM [H]

Synonym: FTL_1805

Alternate gene names: 89257068

Gene position: 1738578-1737511 (Counterclockwise)

Preceding gene: 89257069

Following gene: 89257067

Centisome position: 91.7

GC content: 29.49

Gene sequence:

>1068_bases
ATGAAACTTGAGAATATTTATCTTCAAAAAATTCGTGAACTTGACTTAAAAGTTGATTCTTTACAACTTGAGGCTATTAG
ACGCTTGCAAGAAATAGTCGATCAACTTTATTCAAAAAAAAAATCTAAACTGAGATTGTTTAAAAAATCTTTTTATACTG
CTATCAAAGGATTATATATGTGGGGTGGTGTAGGTCGTGGTAAGACCTTTATAATGGATATCTTCTATAATAATCTCACA
ATAAAGAATAAAAAAAGACAGCATTTCTCGCATTTTATGAAAAATATTCATACGCAATTGAGAAAATATCAGGGTGAAAA
AAACCCAATATCAAAAGTTGCGTTTGATATGGCAAAGCAAACACAAATTATATGTTTTGATGAGTTCTTCGTTGAAGATA
TTGCTGATGCTATGATCTTGGGGAGTATTTTTACTGAGTTATTTAAGTTTGGTGTAGTGTTAGTAGCAACCTCAAATATA
GAGCCAGAAAAGCTTTATAAAAATGGTTTACAACGCGAATTATTTTTACCTGCTATTGATGTATTACTTAAAAATGTTGA
TGTATTAAACTTAGATTCTGGAGTTGATTACAGATTTCGTTTGCCTACTGAGTATCTAAATTATCTCTATCCATATAATG
AACATAATCGTAAAAATTTCTTTGATAAATTCTTCCTGAGAAATAGTCATTTTGATAAAGATCTTAGTATACGAGTCTTA
GCTAGAGATATCCCAACAATATTGCTAAGCCATAAAGATGTTTGCTTTGACTTTAAGGTTATTTGTGGTGATGGTAGAAG
TGCCCATGATTATATTGATATTTGCCATAAATATGAACAGTTATTTATCTATAATTTAGTTGTTTTTGGACCTCATAATG
AGGATATGGCTAGACGCTTTATTGCATTAATAGATGAGTTTTATGATCAGAATAAAAAAGTTGTGATTCTTGCTAATTGT
GATTTTAAGGATTTATATAATGGTGAAAGACTCAAATTTGAGTTTCAACGGACTATAAGTCGGTTAAATGATATGCAGAA
TTCACGTTTTGGAGTTATAAATGAATAA

Upstream 100 bases:

>100_bases
ATATAAATGCATATCATCATGCTTTTTTAATCCTTGTATTTAGCATGATCGTATCATTCTTTTTGCTTATTTTAGTAAAA
GATAAAGAAGTTAAATAAAA

Downstream 100 bases:

>100_bases
GGTTGAGCTTATTGATGTTGCAGAGGATGTAATAGATCAACGTATAGATAATTTTCTTTTAAGTAGATTTTCTCGATTAC
CAAAATCTTTAATTTATCGC

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKLENIYLQKIRELDLKVDSLQLEAIRRLQEIVDQLYSKKKSKLRLFKKSFYTAIKGLYMWGGVGRGKTFIMDIFYNNLT
IKNKKRQHFSHFMKNIHTQLRKYQGEKNPISKVAFDMAKQTQIICFDEFFVEDIADAMILGSIFTELFKFGVVLVATSNI
EPEKLYKNGLQRELFLPAIDVLLKNVDVLNLDSGVDYRFRLPTEYLNYLYPYNEHNRKNFFDKFFLRNSHFDKDLSIRVL
ARDIPTILLSHKDVCFDFKVICGDGRSAHDYIDICHKYEQLFIYNLVVFGPHNEDMARRFIALIDEFYDQNKKVVILANC
DFKDLYNGERLKFEFQRTISRLNDMQNSRFGVINE

Sequences:

>Translated_355_residues
MKLENIYLQKIRELDLKVDSLQLEAIRRLQEIVDQLYSKKKSKLRLFKKSFYTAIKGLYMWGGVGRGKTFIMDIFYNNLT
IKNKKRQHFSHFMKNIHTQLRKYQGEKNPISKVAFDMAKQTQIICFDEFFVEDIADAMILGSIFTELFKFGVVLVATSNI
EPEKLYKNGLQRELFLPAIDVLLKNVDVLNLDSGVDYRFRLPTEYLNYLYPYNEHNRKNFFDKFFLRNSHFDKDLSIRVL
ARDIPTILLSHKDVCFDFKVICGDGRSAHDYIDICHKYEQLFIYNLVVFGPHNEDMARRFIALIDEFYDQNKKVVILANC
DFKDLYNGERLKFEFQRTISRLNDMQNSRFGVINE
>Mature_355_residues
MKLENIYLQKIRELDLKVDSLQLEAIRRLQEIVDQLYSKKKSKLRLFKKSFYTAIKGLYMWGGVGRGKTFIMDIFYNNLT
IKNKKRQHFSHFMKNIHTQLRKYQGEKNPISKVAFDMAKQTQIICFDEFFVEDIADAMILGSIFTELFKFGVVLVATSNI
EPEKLYKNGLQRELFLPAIDVLLKNVDVLNLDSGVDYRFRLPTEYLNYLYPYNEHNRKNFFDKFFLRNSHFDKDLSIRVL
ARDIPTILLSHKDVCFDFKVICGDGRSAHDYIDICHKYEQLFIYNLVVFGPHNEDMARRFIALIDEFYDQNKKVVILANC
DFKDLYNGERLKFEFQRTISRLNDMQNSRFGVINE

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=391, Percent_Identity=34.0153452685422, Blast_Score=197, Evalue=1e-50,
Organism=Escherichia coli, GI1789627, Length=359, Percent_Identity=39.8328690807799, Blast_Score=286, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI17505769, Length=413, Percent_Identity=30.7506053268765, Blast_Score=185, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6320783, Length=317, Percent_Identity=31.2302839116719, Blast_Score=150, Evalue=3e-37,
Organism=Drosophila melanogaster, GI20129913, Length=356, Percent_Identity=32.5842696629214, Blast_Score=159, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42136; Mature: 42136

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLENIYLQKIRELDLKVDSLQLEAIRRLQEIVDQLYSKKKSKLRLFKKSFYTAIKGLYM
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGGVGRGKTFIMDIFYNNLTIKNKKRQHFSHFMKNIHTQLRKYQGEKNPISKVAFDMAKQ
CCCCCCCCEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
TQIICFDEFFVEDIADAMILGSIFTELFKFGVVLVATSNIEPEKLYKNGLQRELFLPAID
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHHH
VLLKNVDVLNLDSGVDYRFRLPTEYLNYLYPYNEHNRKNFFDKFFLRNSHFDKDLSIRVL
HHHCCCCEEECCCCCCEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEH
ARDIPTILLSHKDVCFDFKVICGDGRSAHDYIDICHKYEQLFIYNLVVFGPHNEDMARRF
HHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH
IALIDEFYDQNKKVVILANCDFKDLYNGERLKFEFQRTISRLNDMQNSRFGVINE
HHHHHHHHCCCCCEEEEECCCHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLENIYLQKIRELDLKVDSLQLEAIRRLQEIVDQLYSKKKSKLRLFKKSFYTAIKGLYM
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGGVGRGKTFIMDIFYNNLTIKNKKRQHFSHFMKNIHTQLRKYQGEKNPISKVAFDMAKQ
CCCCCCCCEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
TQIICFDEFFVEDIADAMILGSIFTELFKFGVVLVATSNIEPEKLYKNGLQRELFLPAID
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHHH
VLLKNVDVLNLDSGVDYRFRLPTEYLNYLYPYNEHNRKNFFDKFFLRNSHFDKDLSIRVL
HHHCCCCEEECCCCCCEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEH
ARDIPTILLSHKDVCFDFKVICGDGRSAHDYIDICHKYEQLFIYNLVVFGPHNEDMARRF
HHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH
IALIDEFYDQNKKVVILANCDFKDLYNGERLKFEFQRTISRLNDMQNSRFGVINE
HHHHHHHHCCCCCEEEEECCCHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]