| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is iorA [H]
Identifier: 89056658
GI number: 89056658
Start: 4275956
End: 4276414
Strand: Direct
Name: iorA [H]
Synonym: Jann_4167
Alternate gene names: 89056658
Gene position: 4275956-4276414 (Clockwise)
Preceding gene: 89056657
Following gene: 89056659
Centisome position: 99.03
GC content: 63.62
Gene sequence:
>459_bases ATGCGACTGACGGTGAATGGCGAGGAGCGGGAGGTTGACGTTGCCCCCGACATGCCCCTTCTGTGGGTGCTGCGAGAAGA ATTGAACCTGCCGGGCACGCGCTATGGCTGCGGTATCGCGCAATGCGGAGCGTGCACCGTGCACATTGACGGCCAAGCCG CGCGGTCCTGCCAGACCCGCGTGGGCGATCTGGACGGGGCTGAGATCACGACGGTTGAGGGCCTCGGCCAACCAGATAGC CTTCACGCCGTGCAGCAGGCCTGGATCGACCATCAGGTGGCGCAATGCGGTTATTGTCAAAGCGGGCAGATCATGCAGGC GGCGGCATTGCTGGACGCGAACCCGGCCCCGACCGATCACGACATTGATTTCGTCATGTCCGGCAATCTATGTCGCTGCG GCACCTATCCGCGCATTCGCGAGGCGATCCATACCGCAGCCCGTGCGATGGAGGGTTGA
Upstream 100 bases:
>100_bases AGCGGTGATCCTTCACCTAATCAGGTAAGTTATTTGGACAGTAATTGACTATTTGTCTAATTTAGGCAATACATGGGTCC GTATATCGAGGGAGCCTGCT
Downstream 100 bases:
>100_bases GTAATGGGCAAGCTGAAAACGTTCACCCGCCGCGCGTTCCTCGTGGGCTCAGCCGCCGTCGCGGGCGGCGTGGCGTTCGG GACCTATCTGGTGGCCCGCG
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRLTVNGEEREVDVAPDMPLLWVLREELNLPGTRYGCGIAQCGACTVHIDGQAARSCQTRVGDLDGAEITTVEGLGQPDS LHAVQQAWIDHQVAQCGYCQSGQIMQAAALLDANPAPTDHDIDFVMSGNLCRCGTYPRIREAIHTAARAMEG
Sequences:
>Translated_152_residues MRLTVNGEEREVDVAPDMPLLWVLREELNLPGTRYGCGIAQCGACTVHIDGQAARSCQTRVGDLDGAEITTVEGLGQPDS LHAVQQAWIDHQVAQCGYCQSGQIMQAAALLDANPAPTDHDIDFVMSGNLCRCGTYPRIREAIHTAARAMEG >Mature_152_residues MRLTVNGEEREVDVAPDMPLLWVLREELNLPGTRYGCGIAQCGACTVHIDGQAARSCQTRVGDLDGAEITTVEGLGQPDS LHAVQQAWIDHQVAQCGYCQSGQIMQAAALLDANPAPTDHDIDFVMSGNLCRCGTYPRIREAIHTAARAMEG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=156, Percent_Identity=37.1794871794872, Blast_Score=76, Evalue=9e-15, Organism=Homo sapiens, GI71773480, Length=153, Percent_Identity=36.6013071895425, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786480, Length=162, Percent_Identity=44.4444444444444, Blast_Score=127, Evalue=3e-31, Organism=Escherichia coli, GI1789232, Length=143, Percent_Identity=39.1608391608392, Blast_Score=92, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17540638, Length=154, Percent_Identity=42.2077922077922, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17539860, Length=154, Percent_Identity=34.4155844155844, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=35.0649350649351, Blast_Score=96, Evalue=5e-21, Organism=Drosophila melanogaster, GI17737937, Length=160, Percent_Identity=37.5, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647197, Length=162, Percent_Identity=35.1851851851852, Blast_Score=82, Evalue=9e-17, Organism=Drosophila melanogaster, GI24647195, Length=162, Percent_Identity=35.1851851851852, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24647193, Length=161, Percent_Identity=32.9192546583851, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647201, Length=154, Percent_Identity=31.1688311688312, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI24647199, Length=155, Percent_Identity=30.9677419354839, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16378; Mature: 16378
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTVNGEEREVDVAPDMPLLWVLREELNLPGTRYGCGIAQCGACTVHIDGQAARSCQTR CEEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHH VGDLDGAEITTVEGLGQPDSLHAVQQAWIDHQVAQCGYCQSGQIMQAAALLDANPAPTDH CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC DIDFVMSGNLCRCGTYPRIREAIHTAARAMEG CCEEEEECCEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLTVNGEEREVDVAPDMPLLWVLREELNLPGTRYGCGIAQCGACTVHIDGQAARSCQTR CEEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHH VGDLDGAEITTVEGLGQPDSLHAVQQAWIDHQVAQCGYCQSGQIMQAAALLDANPAPTDH CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC DIDFVMSGNLCRCGTYPRIREAIHTAARAMEG CCEEEEECCEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]