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The map label for this gene is 89056657

Identifier: 89056657

GI number: 89056657

Start: 4275308

End: 4275883

Strand: Direct

Name: 89056657

Synonym: Jann_4166

Alternate gene names: NA

Gene position: 4275308-4275883 (Clockwise)

Preceding gene: 89056656

Following gene: 89056658

Centisome position: 99.01

GC content: 59.72

Gene sequence:

>576_bases
ATGGCCGTCGCGCCCCCCCAATCCGAGAAAGAACAGCAGATCGCCGCCGCTGCCCTGCGCGTGTTCTCTCGCTATGGGTT
GAAGCGCGCCACCATGAACGACATCGCCGAGGAGGCTGGCGTCGTGCGGCAGACCCTCTACAACGTTTTTGCCAACAAGG
ATGAGGTCATCCACGGCACATTGCTGTTCTACAAGGCCGGGCTCCGCCAAACCGTGGCCGATGCCTGGAGGACCGCCGAT
AGTCTGGGTGAGAAGCTCGATTTGTTCTTCGAGCACTACATCCTTTGTTCTTGGGACGCGGCGCGCCAGACGCCCGATGC
CGCTGAGCTGGAAACCAGCAGTCTGACGTCCATCAAGACCGCCATGCGCGAAGCGGACGCGGCCACAGAAGAGATGCTTA
CCGAGCTTTTTATGCCCCACACGGATGCCCTGACCCAAAACGGCCAGGATCCCCAGAGTTTTGCAATCTTCGTCAACGCC
ACGCTCATTGGCTTGAAGCACAATACAGACGATCGCGACGCGCTGACCGCCCATCTCGCCGCCCTCAAAGCGGTGATCCT
TCACCTAATCAGGTAA

Upstream 100 bases:

>100_bases
GACCGGTGGCCACGACGGCACAGGCGCGAGAGATATTGGGCCTGCGTACCTAGGGGTGGCGCAAGTTGACAGACCGATAG
GCCCTGTGAATATGTCGCCC

Downstream 100 bases:

>100_bases
GTTATTTGGACAGTAATTGACTATTTGTCTAATTTAGGCAATACATGGGTCCGTATATCGAGGGAGCCTGCTATGCGACT
GACGGTGAATGGCGAGGAGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulator

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAVAPPQSEKEQQIAAAALRVFSRYGLKRATMNDIAEEAGVVRQTLYNVFANKDEVIHGTLLFYKAGLRQTVADAWRTAD
SLGEKLDLFFEHYILCSWDAARQTPDAAELETSSLTSIKTAMREADAATEEMLTELFMPHTDALTQNGQDPQSFAIFVNA
TLIGLKHNTDDRDALTAHLAALKAVILHLIR

Sequences:

>Translated_191_residues
MAVAPPQSEKEQQIAAAALRVFSRYGLKRATMNDIAEEAGVVRQTLYNVFANKDEVIHGTLLFYKAGLRQTVADAWRTAD
SLGEKLDLFFEHYILCSWDAARQTPDAAELETSSLTSIKTAMREADAATEEMLTELFMPHTDALTQNGQDPQSFAIFVNA
TLIGLKHNTDDRDALTAHLAALKAVILHLIR
>Mature_190_residues
AVAPPQSEKEQQIAAAALRVFSRYGLKRATMNDIAEEAGVVRQTLYNVFANKDEVIHGTLLFYKAGLRQTVADAWRTADS
LGEKLDLFFEHYILCSWDAARQTPDAAELETSSLTSIKTAMREADAATEEMLTELFMPHTDALTQNGQDPQSFAIFVNAT
LIGLKHNTDDRDALTAHLAALKAVILHLIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21134; Mature: 21003

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAPPQSEKEQQIAAAALRVFSRYGLKRATMNDIAEEAGVVRQTLYNVFANKDEVIHGT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLFYKAGLRQTVADAWRTADSLGEKLDLFFEHYILCSWDAARQTPDAAELETSSLTSIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHH
AMREADAATEEMLTELFMPHTDALTQNGQDPQSFAIFVNATLIGLKHNTDDRDALTAHLA
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHEEEEEEHEEEEEECCCCHHHHHHHHHH
ALKAVILHLIR
HHHHHHHHHHC
>Mature Secondary Structure 
AVAPPQSEKEQQIAAAALRVFSRYGLKRATMNDIAEEAGVVRQTLYNVFANKDEVIHGT
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLFYKAGLRQTVADAWRTADSLGEKLDLFFEHYILCSWDAARQTPDAAELETSSLTSIKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHH
AMREADAATEEMLTELFMPHTDALTQNGQDPQSFAIFVNATLIGLKHNTDDRDALTAHLA
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHEEEEEEHEEEEEECCCCHHHHHHHHHH
ALKAVILHLIR
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA