| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is iorB [H]
Identifier: 89056659
GI number: 89056659
Start: 4276418
End: 4278658
Strand: Direct
Name: iorB [H]
Synonym: Jann_4168
Alternate gene names: 89056659
Gene position: 4276418-4278658 (Clockwise)
Preceding gene: 89056658
Following gene: 89056660
Centisome position: 99.04
GC content: 62.78
Gene sequence:
>2241_bases ATGGGCAAGCTGAAAACGTTCACCCGCCGCGCGTTCCTCGTGGGCTCAGCCGCCGTCGCGGGCGGCGTGGCGTTCGGGAC CTATCTGGTGGCCCGCGACCCGGACAACCCCAATCTCCAGGGCTTGGCGGAGGGTGCGGCCTCCTTCAACCCATGGGTCC GCATTGACGCGACGGGCATCACGCTGGTCACGCCCCACGCCGATATCGGACAGGGTGCGGCCTCTATGCAGGCCGCTTTG ATCGCGGAAGAGATGGATCTGGACTGGGCCGACTTCGAGATCGACTTTGGACGTCCTGCCCCGGCCTATTGGAACACGGC GATGGCGGGCGAAAGTGCGCCCGTGCTGCCGTGGGATGACAGTTTTGGCGCACAGGCCATGCGCTCCACCGTCGGGTCCT TGTTGAAGGTAATCGGGATGCAAGGGACCGGCGGCTCCACCTCCACGCCCGACAGCTACGTGAAGCTGCGCGAAGCCGGG GCCATGGCGCGGGAAACGCTGAAGCTGGCGGCATCGCAGCGCACGGGTATTTCTTTTACTGAGATGCGGACAGAGGGGGC GGCCGTCCATCTGCCCGACGGCACGGCAATTCCTTACGTGGACCTGGCGACTGAGGCCGCGGGGTTGGAGCCTGTCCAAG GCACGCCGCTCCGCGATCCGTCCACGTGGCGGTTGGTGGGCAAGGATATGCCACGCATTGACATTGTCCCGAAATCGACC GGCGCGCCGATCTACGGGCTCGACATTGAGCTGCCCGATATGGCCCGCGCAAGCCTGCGAATGAACCCGCGCAAAGGTGG CGCGCTGAACGGGTTTGACGCCTCCACCGCCGAAGCGATGCAGGGCGTTGAGCGCGTTCTGGGGATCCCCGGCGGTGTTG CCGTGATCGCGACCAATACCTGGTACGCGATGCAAGCCCTCGACGCGATTGACTACGATTGGGGTCCTGCCCCCTATGCG CCCGAACAAGCTGACCATTGGGCCGCGCTGGAGCAAGCGTTCACGGAGGAAAACCTCGATAGCGAATGGCTGAACATCGG GGATGTAGAGGCCGATATCCCAAGTGCGACGACGATTGAGGCCGAGTATCGCGCGCCCTACGTGGCCCATCAGCCACTGG AGCCGCTGAACGCGGTTGTATTGGTCGAAGATGATGGCGCGCAGGTCTGGACCGGACATCAGATGCCGCGCTTTCTACAG CAGCAAGTGGCCGCAATTACCGGCCATGATGCCGATCAGATCACGCTTCACAATCAATATGCGGGCGGCTCTTTCGGGCA CCGTCTGGAGTTTGACTACGTCAAGCAAGCGGTTCAGATCGCAATGCAGATGCGCGGGCGGCCAGTTAAGCTGACCTATA GCCGCGAGACGGATTTTGCCCAAGATTTTCCAAGGCAGATCACGATGGGGCGTGGGCGCGGCGCGGTTCTGGACGGTCAA GTTGTCAGCTTTGATACGCAGATCGCGGCGCCCTCTGTTGTTCGGTCTCAAGTGGGTCGAATGGGGCAATCCGTGCCCGG ACCAGACAGTCAGCTAGCCGCCGGTGTCTGGCAACAGCCCTACGGGGTTGAGAACACGCGCATGCGCGCCTATGCGGTGG AAGGGCTGTCGCCCGTCTCGTCCTGGCGCTCGGTCGGGGCATCGGCCAATGGGTTCATTGGTGAGGGTTTTCTGGATGAG CTGATCCATGCCGCTGGCGCGGACCCGTTGGAGGAACGTATTCGCCTGTGTACCCTGGATGACATCAGCCGCCAGGTCCT GGAGGCCGTCGGAGAGATGTCAAACTGGGGGGAGGCTTTGCCGGAGGGCACCGGACGTGGGGTCGCGCTGGTTCATGCCT TTGGCGTTCCCTGCGCAGAGGTTGTGGAAGTCACGATGACCGACGCGGGCATTCGTTTGAACACGGTCTGGGTCGCCGCC GATGTCGGTCGTGTCGTCGATCCGGTGAACTTCGACAATATCGTCAAAGGCGGCGTGATCTGGGGCCTCGGCCACGCGAT CAATTCGGAGATCACCTACACCGATGGCATCGCAGATCAGACGAATTTCCATGCCCATGAAGGGATGCGGATGCATCAAA CGCCCGAGATCTTTGTGCGCGGGTTGGAGAATGGCCATGTGCGCGGGATCGGAGAGCCTCCGGTGCCACCTGCTCCTCCG GCGCTGGCCAACGCGATCTTCGCGGCCACCGGTCAGCGCATCCGAGAGATGCCGTTCTGGAACCACATTGATTTCGTCTG A
Upstream 100 bases:
>100_bases CATTGATTTCGTCATGTCCGGCAATCTATGTCGCTGCGGCACCTATCCGCGCATTCGCGAGGCGATCCATACCGCAGCCC GTGCGATGGAGGGTTGAGTA
Downstream 100 bases:
>100_bases GAGGCAGCCATGACCCGGTTTCTTGCACTTGGCATCGCCGTTCTGGGCGCGACCACCGTCGCCCTGGCCGAAGATGTGGT CATTGACCCGCCCGAAGACG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 746; Mature: 745
Protein sequence:
>746_residues MGKLKTFTRRAFLVGSAAVAGGVAFGTYLVARDPDNPNLQGLAEGAASFNPWVRIDATGITLVTPHADIGQGAASMQAAL IAEEMDLDWADFEIDFGRPAPAYWNTAMAGESAPVLPWDDSFGAQAMRSTVGSLLKVIGMQGTGGSTSTPDSYVKLREAG AMARETLKLAASQRTGISFTEMRTEGAAVHLPDGTAIPYVDLATEAAGLEPVQGTPLRDPSTWRLVGKDMPRIDIVPKST GAPIYGLDIELPDMARASLRMNPRKGGALNGFDASTAEAMQGVERVLGIPGGVAVIATNTWYAMQALDAIDYDWGPAPYA PEQADHWAALEQAFTEENLDSEWLNIGDVEADIPSATTIEAEYRAPYVAHQPLEPLNAVVLVEDDGAQVWTGHQMPRFLQ QQVAAITGHDADQITLHNQYAGGSFGHRLEFDYVKQAVQIAMQMRGRPVKLTYSRETDFAQDFPRQITMGRGRGAVLDGQ VVSFDTQIAAPSVVRSQVGRMGQSVPGPDSQLAAGVWQQPYGVENTRMRAYAVEGLSPVSSWRSVGASANGFIGEGFLDE LIHAAGADPLEERIRLCTLDDISRQVLEAVGEMSNWGEALPEGTGRGVALVHAFGVPCAEVVEVTMTDAGIRLNTVWVAA DVGRVVDPVNFDNIVKGGVIWGLGHAINSEITYTDGIADQTNFHAHEGMRMHQTPEIFVRGLENGHVRGIGEPPVPPAPP ALANAIFAATGQRIREMPFWNHIDFV
Sequences:
>Translated_746_residues MGKLKTFTRRAFLVGSAAVAGGVAFGTYLVARDPDNPNLQGLAEGAASFNPWVRIDATGITLVTPHADIGQGAASMQAAL IAEEMDLDWADFEIDFGRPAPAYWNTAMAGESAPVLPWDDSFGAQAMRSTVGSLLKVIGMQGTGGSTSTPDSYVKLREAG AMARETLKLAASQRTGISFTEMRTEGAAVHLPDGTAIPYVDLATEAAGLEPVQGTPLRDPSTWRLVGKDMPRIDIVPKST GAPIYGLDIELPDMARASLRMNPRKGGALNGFDASTAEAMQGVERVLGIPGGVAVIATNTWYAMQALDAIDYDWGPAPYA PEQADHWAALEQAFTEENLDSEWLNIGDVEADIPSATTIEAEYRAPYVAHQPLEPLNAVVLVEDDGAQVWTGHQMPRFLQ QQVAAITGHDADQITLHNQYAGGSFGHRLEFDYVKQAVQIAMQMRGRPVKLTYSRETDFAQDFPRQITMGRGRGAVLDGQ VVSFDTQIAAPSVVRSQVGRMGQSVPGPDSQLAAGVWQQPYGVENTRMRAYAVEGLSPVSSWRSVGASANGFIGEGFLDE LIHAAGADPLEERIRLCTLDDISRQVLEAVGEMSNWGEALPEGTGRGVALVHAFGVPCAEVVEVTMTDAGIRLNTVWVAA DVGRVVDPVNFDNIVKGGVIWGLGHAINSEITYTDGIADQTNFHAHEGMRMHQTPEIFVRGLENGHVRGIGEPPVPPAPP ALANAIFAATGQRIREMPFWNHIDFV >Mature_745_residues GKLKTFTRRAFLVGSAAVAGGVAFGTYLVARDPDNPNLQGLAEGAASFNPWVRIDATGITLVTPHADIGQGAASMQAALI AEEMDLDWADFEIDFGRPAPAYWNTAMAGESAPVLPWDDSFGAQAMRSTVGSLLKVIGMQGTGGSTSTPDSYVKLREAGA MARETLKLAASQRTGISFTEMRTEGAAVHLPDGTAIPYVDLATEAAGLEPVQGTPLRDPSTWRLVGKDMPRIDIVPKSTG APIYGLDIELPDMARASLRMNPRKGGALNGFDASTAEAMQGVERVLGIPGGVAVIATNTWYAMQALDAIDYDWGPAPYAP EQADHWAALEQAFTEENLDSEWLNIGDVEADIPSATTIEAEYRAPYVAHQPLEPLNAVVLVEDDGAQVWTGHQMPRFLQQ QVAAITGHDADQITLHNQYAGGSFGHRLEFDYVKQAVQIAMQMRGRPVKLTYSRETDFAQDFPRQITMGRGRGAVLDGQV VSFDTQIAAPSVVRSQVGRMGQSVPGPDSQLAAGVWQQPYGVENTRMRAYAVEGLSPVSSWRSVGASANGFIGEGFLDEL IHAAGADPLEERIRLCTLDDISRQVLEAVGEMSNWGEALPEGTGRGVALVHAFGVPCAEVVEVTMTDAGIRLNTVWVAAD VGRVVDPVNFDNIVKGGVIWGLGHAINSEITYTDGIADQTNFHAHEGMRMHQTPEIFVRGLENGHVRGIGEPPVPPAPPA LANAIFAATGQRIREMPFWNHIDFV
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 80001; Mature: 79870
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLKTFTRRAFLVGSAAVAGGVAFGTYLVARDPDNPNLQGLAEGAASFNPWVRIDATGI CCCCHHHHHHHHEEECHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCE TLVTPHADIGQGAASMQAALIAEEMDLDWADFEIDFGRPAPAYWNTAMAGESAPVLPWDD EEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCC SFGAQAMRSTVGSLLKVIGMQGTGGSTSTPDSYVKLREAGAMARETLKLAASQRTGISFT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EMRTEGAAVHLPDGTAIPYVDLATEAAGLEPVQGTPLRDPSTWRLVGKDMPRIDIVPKST HCCCCCCEEECCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCC GAPIYGLDIELPDMARASLRMNPRKGGALNGFDASTAEAMQGVERVLGIPGGVAVIATNT CCCEEEEEECCCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC WYAMQALDAIDYDWGPAPYAPEQADHWAALEQAFTEENLDSEWLNIGDVEADIPSATTIE HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEE AEYRAPYVAHQPLEPLNAVVLVEDDGAQVWTGHQMPRFLQQQVAAITGHDADQITLHNQY HHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCC AGGSFGHRLEFDYVKQAVQIAMQMRGRPVKLTYSRETDFAQDFPRQITMGRGRGAVLDGQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCHHHCCCCCCCEEECCE VVSFDTQIAAPSVVRSQVGRMGQSVPGPDSQLAAGVWQQPYGVENTRMRAYAVEGLSPVS EEEECCHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHH SWRSVGASANGFIGEGFLDELIHAAGADPLEERIRLCTLDDISRQVLEAVGEMSNWGEAL HHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHC PEGTGRGVALVHAFGVPCAEVVEVTMTDAGIRLNTVWVAADVGRVVDPVNFDNIVKGGVI CCCCCCCEEEEEECCCCHHHHHEEEECCCCEEEEEEEEEECHHHHCCCCCHHHHHCCCEE WGLGHAINSEITYTDGIADQTNFHAHEGMRMHQTPEIFVRGLENGHVRGIGEPPVPPAPP EECHHHHCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCH ALANAIFAATGQRIREMPFWNHIDFV HHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GKLKTFTRRAFLVGSAAVAGGVAFGTYLVARDPDNPNLQGLAEGAASFNPWVRIDATGI CCCHHHHHHHHEEECHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCE TLVTPHADIGQGAASMQAALIAEEMDLDWADFEIDFGRPAPAYWNTAMAGESAPVLPWDD EEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCC SFGAQAMRSTVGSLLKVIGMQGTGGSTSTPDSYVKLREAGAMARETLKLAASQRTGISFT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EMRTEGAAVHLPDGTAIPYVDLATEAAGLEPVQGTPLRDPSTWRLVGKDMPRIDIVPKST HCCCCCCEEECCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCC GAPIYGLDIELPDMARASLRMNPRKGGALNGFDASTAEAMQGVERVLGIPGGVAVIATNT CCCEEEEEECCCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECC WYAMQALDAIDYDWGPAPYAPEQADHWAALEQAFTEENLDSEWLNIGDVEADIPSATTIE HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEE AEYRAPYVAHQPLEPLNAVVLVEDDGAQVWTGHQMPRFLQQQVAAITGHDADQITLHNQY HHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCC AGGSFGHRLEFDYVKQAVQIAMQMRGRPVKLTYSRETDFAQDFPRQITMGRGRGAVLDGQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCHHHCCCCCCCEEECCE VVSFDTQIAAPSVVRSQVGRMGQSVPGPDSQLAAGVWQQPYGVENTRMRAYAVEGLSPVS EEEECCHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHH SWRSVGASANGFIGEGFLDELIHAAGADPLEERIRLCTLDDISRQVLEAVGEMSNWGEAL HHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHC PEGTGRGVALVHAFGVPCAEVVEVTMTDAGIRLNTVWVAADVGRVVDPVNFDNIVKGGVI CCCCCCCEEEEEECCCCHHHHHEEEECCCCEEEEEEEEEECHHHHCCCCCHHHHHCCCEE WGLGHAINSEITYTDGIADQTNFHAHEGMRMHQTPEIFVRGLENGHVRGIGEPPVPPAPP EECHHHHCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCH ALANAIFAATGQRIREMPFWNHIDFV HHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]