| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is fabG [H]
Identifier: 89056304
GI number: 89056304
Start: 3901351
End: 3902052
Strand: Direct
Name: fabG [H]
Synonym: Jann_3813
Alternate gene names: 89056304
Gene position: 3901351-3902052 (Clockwise)
Preceding gene: 89056303
Following gene: 89056305
Centisome position: 90.35
GC content: 63.68
Gene sequence:
>702_bases ATGACTAAAGTTGCACTGATAACTGCGGGCGGAAGCGGAATGGGCGCGGACAGCGCAAGCGCGCTCGCGGCCGATGGCTA CAAGGTCGGCATCCTGTCGTCCTCCGGCAAGGGAGAGGCGTTGGCCCATGAATTAGGCGGCGTCGGCGTGACCGGTACAA ACAAATCCGAGGACGATCTGCAAGCGCTCATTGATGCGGCGATGACCCATTGGGGCCGCGTCGACGTGTTGGTGAATTCA GCCGGACACGGCCCGCGCGCGCCCGTGCTGGAGTTGACCGATGCCGACTGGCACGAGGGGATGGAGGTCTATTTCCTCAA CGCCGTGCGCCCATCGCGCCTTGTCACCCCGATCATGCAGGCCCAGGGTGGCGGCGCGATCATCAACATCTCCACCTTCG CGGCGTTCGAGCCCAATGCCGTGTTCCCGACCTCCGGCGTGATGCGCGCGGGCCTTGCCGCGTTCACCAAGCTCTTCGCC GACACATACGCGCCCGAGAATATCCGCATGAACAACGTGCTGCCCGGCTTCATCGACAGCCTGCCGGAGAAAGAGGAGTT CCGCGCGATGATCCCCATGGGCCGCTACGGGAACTCCCTAGGTGAGATCGCCAGCGTTGTGGCCTTCCTCGCCTCCGCCG GCGGGGCGTATATCACCGGACAAAACATTCGTGTGGATGGCGGGATCACGCGGTCGGTTTGA
Upstream 100 bases:
>100_bases GAAGAGGCGTCGCGTGATTATGGGCTGTCGCCTAAGGACATTGCGGGCGTGGCGGCGAGTGTCGCCAGAGGCGAAGACAT CTGAGGACAGGAGAAACTCA
Downstream 100 bases:
>100_bases CACGTTGAATGTCGCGCAACGCCCTTGACCCGCCCTGAAAATCCAGCGCGGATAGCATATGACCGACACGTTTGACGATA TCCCCACTGTCTGGATCCCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTKVALITAGGSGMGADSASALAADGYKVGILSSSGKGEALAHELGGVGVTGTNKSEDDLQALIDAAMTHWGRVDVLVNS AGHGPRAPVLELTDADWHEGMEVYFLNAVRPSRLVTPIMQAQGGGAIINISTFAAFEPNAVFPTSGVMRAGLAAFTKLFA DTYAPENIRMNNVLPGFIDSLPEKEEFRAMIPMGRYGNSLGEIASVVAFLASAGGAYITGQNIRVDGGITRSV
Sequences:
>Translated_233_residues MTKVALITAGGSGMGADSASALAADGYKVGILSSSGKGEALAHELGGVGVTGTNKSEDDLQALIDAAMTHWGRVDVLVNS AGHGPRAPVLELTDADWHEGMEVYFLNAVRPSRLVTPIMQAQGGGAIINISTFAAFEPNAVFPTSGVMRAGLAAFTKLFA DTYAPENIRMNNVLPGFIDSLPEKEEFRAMIPMGRYGNSLGEIASVVAFLASAGGAYITGQNIRVDGGITRSV >Mature_232_residues TKVALITAGGSGMGADSASALAADGYKVGILSSSGKGEALAHELGGVGVTGTNKSEDDLQALIDAAMTHWGRVDVLVNSA GHGPRAPVLELTDADWHEGMEVYFLNAVRPSRLVTPIMQAQGGGAIINISTFAAFEPNAVFPTSGVMRAGLAAFTKLFAD TYAPENIRMNNVLPGFIDSLPEKEEFRAMIPMGRYGNSLGEIASVVAFLASAGGAYITGQNIRVDGGITRSV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=32.9218106995885, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=29.2372881355932, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=32.9317269076305, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=29.6, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=29.8387096774194, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI33667109, Length=209, Percent_Identity=33.4928229665072, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=27.9352226720648, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=28.4, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI126723191, Length=177, Percent_Identity=31.638418079096, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI66933014, Length=223, Percent_Identity=29.1479820627803, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI59889578, Length=207, Percent_Identity=29.4685990338164, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI4758504, Length=250, Percent_Identity=32, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1787335, Length=237, Percent_Identity=32.4894514767932, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789208, Length=241, Percent_Identity=29.8755186721992, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=33.6065573770492, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=31.4285714285714, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=31.8181818181818, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=29.8804780876494, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=27.3469387755102, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=27.5862068965517, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=28.3950617283951, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=31.0483870967742, Blast_Score=97, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=32.046332046332, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=30, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=28.2868525896414, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=31.9672131147541, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=30.2681992337165, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=26.4150943396226, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=27.1255060728745, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=28.6259541984733, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=27.027027027027, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=30.1526717557252, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=28.1368821292776, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=29.0566037735849, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=28.4615384615385, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=26.7175572519084, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=28.735632183908, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=26.5151515151515, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=186, Percent_Identity=27.9569892473118, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=30.7377049180328, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=31.5573770491803, Blast_Score=97, Evalue=7e-21, Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=31.4285714285714, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=27.8884462151394, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=28.1746031746032, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24131; Mature: 23999
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVALITAGGSGMGADSASALAADGYKVGILSSSGKGEALAHELGGVGVTGTNKSEDDL CCEEEEEEECCCCCCCCCCCCEECCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHH QALIDAAMTHWGRVDVLVNSAGHGPRAPVLELTDADWHEGMEVYFLNAVRPSRLVTPIMQ HHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHH AQGGGAIINISTFAAFEPNAVFPTSGVMRAGLAAFTKLFADTYAPENIRMNNVLPGFIDS CCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHC LPEKEEFRAMIPMGRYGNSLGEIASVVAFLASAGGAYITGQNIRVDGGITRSV CCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCEEEECCCEECCC >Mature Secondary Structure TKVALITAGGSGMGADSASALAADGYKVGILSSSGKGEALAHELGGVGVTGTNKSEDDL CEEEEEEECCCCCCCCCCCCEECCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHH QALIDAAMTHWGRVDVLVNSAGHGPRAPVLELTDADWHEGMEVYFLNAVRPSRLVTPIMQ HHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHH AQGGGAIINISTFAAFEPNAVFPTSGVMRAGLAAFTKLFADTYAPENIRMNNVLPGFIDS CCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHC LPEKEEFRAMIPMGRYGNSLGEIASVVAFLASAGGAYITGQNIRVDGGITRSV CCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]