| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is hyuB [H]
Identifier: 89056303
GI number: 89056303
Start: 3899628
End: 3901334
Strand: Direct
Name: hyuB [H]
Synonym: Jann_3812
Alternate gene names: 89056303
Gene position: 3899628-3901334 (Clockwise)
Preceding gene: 89056302
Following gene: 89056304
Centisome position: 90.31
GC content: 64.5
Gene sequence:
>1707_bases ATGAGTGCTTCAAACGACGCCGGGCCCGGCAATGTCGCCTACCAAGTCATGTGGAACCGCCTGATCTCCATCGTGGAGGA ACAGGCGCAAGCGTTGGTGCGCACGGCATTCTCCACCTCCGTGCGCGAGGCCGGAGATCTGAGTGCCGGGGTCTACGACA CCCATGGCCGCATGTTGGCTCAGGCCGTCACTGGCACACCGGGCCACGTTAACGCCATGGCCGATGCGGTGCCGCATTTC ATCCGCCGCATCGGGCGGGACACGATGACTGAGGGCGACGTCTACATCACCAATGACCCATGGGAGGGCACGGGGCATTT GCACGACATCACCATGGTCACGCCATCGTTCAAGGACGGCGCGCTGGTGGGGTTCTTCGCCTGCACCGCCCATGTGGTGG ATATCGGCGGGCGCGGGTTCGGGGCGGATGGCCAATCCGTCTACGAGGAAGGCCTCTACCTGCCGATCATGCGGTTCGCC GCGCGTGGAGAGGTCGATGAAACGCTGATCCGTATCGTGCGCGGCAATGTCCGCGAGCCGGATCAACTGGTCGGCGACAT GTATGCGCTGGCAACCTGCAACGAGATCGGCCACCGCCGTCTGATTGACATGATGGCAGAGTTCACGCTTAGCGATCTGG ATGGAATCGCGGAGTTCATCCTGTCCAACTCCCGCCGCGCGACGTTGGAGCGGATCAATGCCCTGCCCCGCAAGGCTGCG GACGGAGAGATGACGGTGGACGGCTTCGACACACCAATCACCCTGAAAGCACGGGTCAGCATCGAAGAAGACAGGATCGT CACCGATTTCACCGGCACATCCGGCATCGACAAGAAGGGCATCAACTGCCCGATGGTCTATACGAAAGCCTATGCCTGCT ATGCGCTAAAGGTCGCGATTGCGCCCGAGATCCCCAACAACGCGGCCTCTCTCGCGCCGTTTGAGGTGACGGCCCCGGAA GGCACCATCGTCAACGCCATGCATCCCGCGCCAGTGGCATTGCGCCATATCGTGGGGCATTTCGTGCCAGACGTCGTCTT CGATGCGTTCGACAAGATCGTCCCTGGCCTGGTGCCTGCCGAAGGGGCCGGGTGTCTATGCAACTTCCAGATGTCGGTGC GGCCAACCGCGCCCGGTGGCAGGCGCGCTGAGGTGCTGACATTCAATTCCGGCGGCTCCGGCGCGCGGCCCGAAGTGGAC GGGTTGAACGCGACGGCCTTCCCCTCGGGCGTCATGACCATGCCGATTGAGGCCACAGAACACGCGGGCCCGGTGATCAT CTGGCGCAAGGAACTGCGCCCGGGCTCCGGCGGGGCGGGCAGGACGCGCGGGGGCCTTGGTCAATACATGGACGTCAGCG CCATGCCGGGCCACGAGTTCGACCTGCAGGCCATGTTCGACCGGGGCGGTCACCCTGCGCGCGGGCGGCGCGGGGGGCAG GCCGGTGCACCAACAACAATTGCGCAGGACGACGGCACGGCAATGCGGGTCAAAGGCAAGCAATTCGTGGCAGAGGGGCG GCGCGTCCAAATGGCGTTCCCCGGGGGCGCAGGCTACGGAAACGCCGCTGATCGTGACCCGGCTCTGGTCAAACGCGATC TGGCGCGCGGCTACATCAGCGCGGAAGAGGCGTCGCGTGATTATGGGCTGTCGCCTAAGGACATTGCGGGCGTGGCGGCG AGTGTCGCCAGAGGCGAAGACATCTGA
Upstream 100 bases:
>100_bases ACAATCACCGAGGATGAAACGACGATCATCCTGCCCGCCAGCCGCCGCGCCTCTTGTCAGCCTGACGGCTGCATCGACCT TGTGAAGAAGGATTGAGCCG
Downstream 100 bases:
>100_bases GGACAGGAGAAACTCAATGACTAAAGTTGCACTGATAACTGCGGGCGGAAGCGGAATGGGCGCGGACAGCGCAAGCGCGC TCGCGGCCGATGGCTACAAG
Product: 5-oxoprolinase
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MSASNDAGPGNVAYQVMWNRLISIVEEQAQALVRTAFSTSVREAGDLSAGVYDTHGRMLAQAVTGTPGHVNAMADAVPHF IRRIGRDTMTEGDVYITNDPWEGTGHLHDITMVTPSFKDGALVGFFACTAHVVDIGGRGFGADGQSVYEEGLYLPIMRFA ARGEVDETLIRIVRGNVREPDQLVGDMYALATCNEIGHRRLIDMMAEFTLSDLDGIAEFILSNSRRATLERINALPRKAA DGEMTVDGFDTPITLKARVSIEEDRIVTDFTGTSGIDKKGINCPMVYTKAYACYALKVAIAPEIPNNAASLAPFEVTAPE GTIVNAMHPAPVALRHIVGHFVPDVVFDAFDKIVPGLVPAEGAGCLCNFQMSVRPTAPGGRRAEVLTFNSGGSGARPEVD GLNATAFPSGVMTMPIEATEHAGPVIIWRKELRPGSGGAGRTRGGLGQYMDVSAMPGHEFDLQAMFDRGGHPARGRRGGQ AGAPTTIAQDDGTAMRVKGKQFVAEGRRVQMAFPGGAGYGNAADRDPALVKRDLARGYISAEEASRDYGLSPKDIAGVAA SVARGEDI
Sequences:
>Translated_568_residues MSASNDAGPGNVAYQVMWNRLISIVEEQAQALVRTAFSTSVREAGDLSAGVYDTHGRMLAQAVTGTPGHVNAMADAVPHF IRRIGRDTMTEGDVYITNDPWEGTGHLHDITMVTPSFKDGALVGFFACTAHVVDIGGRGFGADGQSVYEEGLYLPIMRFA ARGEVDETLIRIVRGNVREPDQLVGDMYALATCNEIGHRRLIDMMAEFTLSDLDGIAEFILSNSRRATLERINALPRKAA DGEMTVDGFDTPITLKARVSIEEDRIVTDFTGTSGIDKKGINCPMVYTKAYACYALKVAIAPEIPNNAASLAPFEVTAPE GTIVNAMHPAPVALRHIVGHFVPDVVFDAFDKIVPGLVPAEGAGCLCNFQMSVRPTAPGGRRAEVLTFNSGGSGARPEVD GLNATAFPSGVMTMPIEATEHAGPVIIWRKELRPGSGGAGRTRGGLGQYMDVSAMPGHEFDLQAMFDRGGHPARGRRGGQ AGAPTTIAQDDGTAMRVKGKQFVAEGRRVQMAFPGGAGYGNAADRDPALVKRDLARGYISAEEASRDYGLSPKDIAGVAA SVARGEDI >Mature_567_residues SASNDAGPGNVAYQVMWNRLISIVEEQAQALVRTAFSTSVREAGDLSAGVYDTHGRMLAQAVTGTPGHVNAMADAVPHFI RRIGRDTMTEGDVYITNDPWEGTGHLHDITMVTPSFKDGALVGFFACTAHVVDIGGRGFGADGQSVYEEGLYLPIMRFAA RGEVDETLIRIVRGNVREPDQLVGDMYALATCNEIGHRRLIDMMAEFTLSDLDGIAEFILSNSRRATLERINALPRKAAD GEMTVDGFDTPITLKARVSIEEDRIVTDFTGTSGIDKKGINCPMVYTKAYACYALKVAIAPEIPNNAASLAPFEVTAPEG TIVNAMHPAPVALRHIVGHFVPDVVFDAFDKIVPGLVPAEGAGCLCNFQMSVRPTAPGGRRAEVLTFNSGGSGARPEVDG LNATAFPSGVMTMPIEATEHAGPVIIWRKELRPGSGGAGRTRGGLGQYMDVSAMPGHEFDLQAMFDRGGHPARGRRGGQA GAPTTIAQDDGTAMRVKGKQFVAEGRRVQMAFPGGAGYGNAADRDPALVKRDLARGYISAEEASRDYGLSPKDIAGVAAS VARGEDI
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=543, Percent_Identity=27.0718232044199, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI133901900, Length=530, Percent_Identity=27.3584905660377, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI133901902, Length=528, Percent_Identity=26.7045454545455, Blast_Score=132, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6322634, Length=553, Percent_Identity=25.8589511754069, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI45550492, Length=577, Percent_Identity=26.6897746967071, Blast_Score=124, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: NA
Molecular weight: Translated: 60395; Mature: 60264
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASNDAGPGNVAYQVMWNRLISIVEEQAQALVRTAFSTSVREAGDLSAGVYDTHGRMLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHH QAVTGTPGHVNAMADAVPHFIRRIGRDTMTEGDVYITNDPWEGTGHLHDITMVTPSFKDG HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCC ALVGFFACTAHVVDIGGRGFGADGQSVYEEGLYLPIMRFAARGEVDETLIRIVRGNVREP CEEHHHHHHHHHEECCCCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCH DQLVGDMYALATCNEIGHRRLIDMMAEFTLSDLDGIAEFILSNSRRATLERINALPRKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC DGEMTVDGFDTPITLKARVSIEEDRIVTDFTGTSGIDKKGINCPMVYTKAYACYALKVAI CCCEEECCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEEE APEIPNNAASLAPFEVTAPEGTIVNAMHPAPVALRHIVGHFVPDVVFDAFDKIVPGLVPA CCCCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EGAGCLCNFQMSVRPTAPGGRRAEVLTFNSGGSGARPEVDGLNATAFPSGVMTMPIEATE CCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECEECCC HAGPVIIWRKELRPGSGGAGRTRGGLGQYMDVSAMPGHEFDLQAMFDRGGHPARGRRGGQ CCCCEEEEHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC AGAPTTIAQDDGTAMRVKGKQFVAEGRRVQMAFPGGAGYGNAADRDPALVKRDLARGYIS CCCCCEEECCCCCEEEECCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC AEEASRDYGLSPKDIAGVAASVARGEDI HHHCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SASNDAGPGNVAYQVMWNRLISIVEEQAQALVRTAFSTSVREAGDLSAGVYDTHGRMLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHH QAVTGTPGHVNAMADAVPHFIRRIGRDTMTEGDVYITNDPWEGTGHLHDITMVTPSFKDG HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCC ALVGFFACTAHVVDIGGRGFGADGQSVYEEGLYLPIMRFAARGEVDETLIRIVRGNVREP CEEHHHHHHHHHEECCCCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCH DQLVGDMYALATCNEIGHRRLIDMMAEFTLSDLDGIAEFILSNSRRATLERINALPRKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC DGEMTVDGFDTPITLKARVSIEEDRIVTDFTGTSGIDKKGINCPMVYTKAYACYALKVAI CCCEEECCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEEE APEIPNNAASLAPFEVTAPEGTIVNAMHPAPVALRHIVGHFVPDVVFDAFDKIVPGLVPA CCCCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EGAGCLCNFQMSVRPTAPGGRRAEVLTFNSGGSGARPEVDGLNATAFPSGVMTMPIEATE CCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECEECCC HAGPVIIWRKELRPGSGGAGRTRGGLGQYMDVSAMPGHEFDLQAMFDRGGHPARGRRGGQ CCCCEEEEHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC AGAPTTIAQDDGTAMRVKGKQFVAEGRRVQMAFPGGAGYGNAADRDPALVKRDLARGYIS CCCCCEEECCCCCEEEECCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC AEEASRDYGLSPKDIAGVAASVARGEDI HHHCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]